RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 ATF7IPQ6VMQ6 1270 aa31.21■■■□□ 2.59
MSH2-203ENST00000454849 SAMD7Q7Z3H4 446 aa31.21■■■□□ 2.59
MSH2-203ENST00000454849 H7C1D1 291 aa31.2■■■□□ 2.59
MSH2-203ENST00000454849 FMR1Q06787 632 aaKnown RBP eCLIP31.2■■■□□ 2.591e-7■■□□□ 13.2
MSH2-203ENST00000454849 LRRFIP2Q9Y608 721 aaKnown RBP31.2■■■□□ 2.59
MSH2-203ENST00000454849 EGFRP00533 1210 aa31.19■■■□□ 2.58
MSH2-203ENST00000454849 TBC1D10BQ4KMP7 808 aaPredicted RBP31.19■■■□□ 2.58
MSH2-203ENST00000454849 INTS3Q68E01 1043 aaKnown RBP31.19■■■□□ 2.58
MSH2-203ENST00000454849 PODNQ7Z5L7 613 aa31.19■■■□□ 2.58
MSH2-203ENST00000454849 ADAMTSL1Q8N6G6 1762 aa31.18■■■□□ 2.58
MSH2-203ENST00000454849 USP17L3A6NCW0 530 aa31.18■■■□□ 2.58
MSH2-203ENST00000454849 USP17L4A6NCW7 530 aa31.18■■■□□ 2.58
MSH2-203ENST00000454849 USP17L1Q7RTZ2 530 aa31.18■■■□□ 2.58
MSH2-203ENST00000454849 DPF2Q92785 391 aa31.18■■■□□ 2.58
MSH2-203ENST00000454849 COA1Q9GZY4 146 aa31.18■■■□□ 2.58
MSH2-203ENST00000454849 RIPOR2Q9Y4F9 1068 aa31.18■■■□□ 2.58
MSH2-203ENST00000454849 RSBN1LQ6PCB5 846 aaPredicted RBP31.17■■■□□ 2.58
MSH2-203ENST00000454849 DNAJC5GQ8N7S2 189 aa31.17■■■□□ 2.58
MSH2-203ENST00000454849 ZKSCAN2Q63HK3 967 aa31.16■■■□□ 2.58
MSH2-203ENST00000454849 PASKQ96RG2 1323 aa31.16■■■□□ 2.58
MSH2-203ENST00000454849 TRAF5O00463 557 aa31.15■■■□□ 2.58
MSH2-203ENST00000454849 RPS12P25398 132 aaKnown RBP31.15■■■□□ 2.58
MSH2-203ENST00000454849 IRS2Q9Y4H2 1338 aa31.15■■■□□ 2.58
MSH2-203ENST00000454849 RFX5P48382 616 aaPredicted RBP31.14■■■□□ 2.58
MSH2-203ENST00000454849 METTL24Q5JXM2 366 aa31.13■■■□□ 2.57
MSH2-203ENST00000454849 TMEM57Q8N5G2 664 aa31.13■■■□□ 2.57
MSH2-203ENST00000454849 CD209Q9NNX6 404 aa31.13■■■□□ 2.57
MSH2-203ENST00000454849 GTF2IP78347 998 aa31.12■■■□□ 2.57
MSH2-203ENST00000454849 DACT2Q5SW24 774 aa31.12■■■□□ 2.57
MSH2-203ENST00000454849 GMLQ99445 158 aa31.12■■■□□ 2.57
MSH2-203ENST00000454849 JAG2Q9Y219 1238 aa31.12■■■□□ 2.57
MSH2-203ENST00000454849 A0A1B0GUL6 1792 aa31.11■■■□□ 2.57
MSH2-203ENST00000454849 TTLL5Q6EMB2 1281 aa31.11■■■□□ 2.57
MSH2-203ENST00000454849 GLIS2Q9BZE0 524 aaPredicted RBP31.11■■■□□ 2.57
MSH2-203ENST00000454849 SIL1Q9H173 461 aa31.11■■■□□ 2.57
MSH2-203ENST00000454849 MROH5Q6ZUA9 1318 aa31.1■■■□□ 2.57
MSH2-203ENST00000454849 GYG1P46976 350 aa31.1■■■□□ 2.57
MSH2-203ENST00000454849 PTPN12Q05209 780 aaKnown RBP31.1■■■□□ 2.57
MSH2-203ENST00000454849 DLK2Q6UY11 383 aa31.1■■■□□ 2.57
MSH2-203ENST00000454849 AGBL3Q8NEM8 1001 aa31.1■■■□□ 2.57
MSH2-203ENST00000454849 ASTN2O75129 1339 aaPredicted RBP31.09■■■□□ 2.57
MSH2-203ENST00000454849 KIF4BQ2VIQ3 1234 aa31.09■■■□□ 2.57
MSH2-203ENST00000454849 C15orf52Q6ZUT6 534 aaKnown RBP31.09■■■□□ 2.57
MSH2-203ENST00000454849 PA2G4Q9UQ80 394 aaKnown RBP31.09■■■□□ 2.57
MSH2-203ENST00000454849 GNAI3P08754 354 aa31.08■■■□□ 2.57
MSH2-203ENST00000454849 USP17L8P0C7I0 530 aa31.08■■■□□ 2.57
MSH2-203ENST00000454849 RLBP1P12271 317 aa31.08■■■□□ 2.57
MSH2-203ENST00000454849 UBE4AQ14139 1066 aa31.08■■■□□ 2.57
MSH2-203ENST00000454849 STRIP1Q5VSL9 837 aa31.08■■■□□ 2.57
MSH2-203ENST00000454849 ZNF804AQ7Z570 1209 aa31.08■■■□□ 2.57
MSH2-203ENST00000454849 CREBZFQ9NS37 354 aa31.07■■■□□ 2.56
MSH2-203ENST00000454849 EYA2O00167 538 aa31.06■■■□□ 2.56
MSH2-203ENST00000454849 USP48Q86UV5 1035 aa31.06■■■□□ 2.56
MSH2-203ENST00000454849 FTSJ3Q8IY81 847 aaKnown RBP31.06■■■□□ 2.56
MSH2-203ENST00000454849 KLRG1Q96E93 195 aa31.06■■■□□ 2.56
MSH2-203ENST00000454849 MKRN1Q9UHC7 482 aaKnown RBP31.06■■■□□ 2.56
MSH2-203ENST00000454849 PGAP2Q9UHJ9 254 aa31.06■■■□□ 2.56
MSH2-203ENST00000454849 TMEM88BA6NKF7 163 aa31.05■■■□□ 2.56
MSH2-203ENST00000454849 ZNF280AP59817 542 aaPredicted RBP31.05■■■□□ 2.56
MSH2-203ENST00000454849 VGLL2Q8N8G2 317 aa31.05■■■□□ 2.56
MSH2-203ENST00000454849 HDAC5Q9UQL6 1122 aa31.05■■■□□ 2.56
MSH2-203ENST00000454849 PDE8BO95263 885 aa31.04■■■□□ 2.56
MSH2-203ENST00000454849 ATG9AQ7Z3C6 839 aa31.04■■■□□ 2.56
MSH2-203ENST00000454849 KIAA0825Q8IV33 1275 aa31.04■■■□□ 2.56
MSH2-203ENST00000454849 DZIP1LQ8IYY4 767 aaKnown RBP31.04■■■□□ 2.56
MSH2-203ENST00000454849 ZC3H15Q8WU90 426 aaKnown RBP31.04■■■□□ 2.56
MSH2-203ENST00000454849 FAM84BQ96KN1 310 aaPredicted RBP31.04■■■□□ 2.56
MSH2-203ENST00000454849 IQSEC3Q9UPP2 1182 aaPredicted RBP31.04■■■□□ 2.56
MSH2-203ENST00000454849 PSME4Q14997 1843 aa31.03■■■□□ 2.56
MSH2-203ENST00000454849 IL1R1P14778 569 aa31.03■■■□□ 2.56
MSH2-203ENST00000454849 MYOZ2Q9NPC6 264 aa31.03■■■□□ 2.56
MSH2-203ENST00000454849 HIBADHP31937 336 aaKnown RBP31.02■■■□□ 2.56
MSH2-203ENST00000454849 SCARF1Q14162 830 aa31.02■■■□□ 2.56
MSH2-203ENST00000454849 ITPRIPQ8IWB1 547 aa31.02■■■□□ 2.56
MSH2-203ENST00000454849 CERS5Q8N5B7 392 aa31.02■■■□□ 2.56
MSH2-203ENST00000454849 ZNF408Q9H9D4 720 aa31.02■■■□□ 2.56
MSH2-203ENST00000454849 SCAF8Q9UPN6 1271 aaKnown RBP31.02■■■□□ 2.56
MSH2-203ENST00000454849 F8W031 263 aaPredicted RBP31.01■■■□□ 2.55
MSH2-203ENST00000454849 SRGAP3O43295 1099 aa31.01■■■□□ 2.55
MSH2-203ENST00000454849 GNAI2P04899 355 aa31.01■■■□□ 2.55
MSH2-203ENST00000454849 CST9Q5W186 159 aa31.01■■■□□ 2.55
MSH2-203ENST00000454849 PANK1Q8TE04 598 aa31.01■■■□□ 2.55
MSH2-203ENST00000454849 ADM5C9JUS6 153 aa31■■■□□ 2.55
MSH2-203ENST00000454849 C1orf115Q9H7X2 142 aa31■■■□□ 2.55
MSH2-203ENST00000454849 GGA3Q9NZ52 723 aa31■■■□□ 2.55
MSH2-203ENST00000454849 ABT1Q9ULW3 272 aaKnown RBP31■■■□□ 2.55
MSH2-203ENST00000454849 BCAMP50895 628 aa30.99■■■□□ 2.55
MSH2-203ENST00000454849 CDC37L1Q7L3B6 337 aa30.99■■■□□ 2.55
MSH2-203ENST00000454849 KRT26Q7Z3Y9 468 aa30.99■■■□□ 2.55
MSH2-203ENST00000454849 VPS37DQ86XT2 251 aa30.99■■■□□ 2.55
MSH2-203ENST00000454849 OGFOD1Q8N543 542 aa30.99■■■□□ 2.55
MSH2-203ENST00000454849 DCPSQ96C86 337 aaKnown RBP30.99■■■□□ 2.55
MSH2-203ENST00000454849 CELF2O95319 508 aaKnown RBP30.98■■■□□ 2.55
MSH2-203ENST00000454849 NBPF9Q3BBW0 867 aa30.98■■■□□ 2.55
MSH2-203ENST00000454849 ANGEL2Q5VTE6 544 aaKnown RBP30.98■■■□□ 2.55
MSH2-203ENST00000454849 TDRD7Q8NHU6 1098 aaKnown RBP30.98■■■□□ 2.55
MSH2-203ENST00000454849 ZNF646O15015 1829 aaPredicted RBP30.98■■■□□ 2.55
MSH2-203ENST00000454849 ZNF609O15014 1411 aa30.98■■■□□ 2.55
MSH2-203ENST00000454849 PUM3Q15397 648 aaKnown RBP30.97■■■□□ 2.55
MSH2-203ENST00000454849 FBXO33Q7Z6M2 555 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms