RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 CCDC30Q5VVM6 783 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 LARP1BQ659C4 914 aaKnown RBP4□□□□□ -1.77
AC006539.3-201ENST00000454258 NAA16Q6N069 864 aaPredicted RBP4□□□□□ -1.77
AC006539.3-201ENST00000454258 GIGYF2Q6Y7W6 1299 aaKnown RBP4□□□□□ -1.77
AC006539.3-201ENST00000454258 MMS22LQ6ZRQ5 1243 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 MICALCLQ6ZW33 695 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 HDXQ7Z353 690 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 NBPF11Q86T75 865 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 CCDC83Q8IWF9 413 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 SIRT2Q8IXJ6 389 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 SPC24Q8NBT2 197 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 EHBP1Q8NDI1 1231 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 KCNG4Q8TDN1 519 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 STAG1Q8WVM7 1258 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 ZNF592Q92610 1267 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 KCNB2Q92953 911 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 TTC14Q96N46 770 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 UPF3BQ9BZI7 483 aaKnown RBP4□□□□□ -1.77
AC006539.3-201ENST00000454258 SLC12A5Q9H2X9 1139 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 VIPAS39Q9H9C1 493 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 CBX8Q9HC52 389 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 A1CFQ9NQ94 594 aaKnown RBP4□□□□□ -1.77
AC006539.3-201ENST00000454258 SNRKQ9NRH2 765 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 MBIPQ9NS73 344 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 TNNQ9UQP3 1299 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 MTMR6Q9Y217 621 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 CNPY2Q9Y2B0 182 aa4□□□□□ -1.77
AC006539.3-201ENST00000454258 MYH15Q9Y2K3 1946 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 LMTK3Q96Q04 1460 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 SETD1AO15047 1707 aaKnown RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 NALCNQ8IZF0 1738 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 A0A1W2PQ27 194 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 A0A1W2PQ64 194 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 A0A1W2PQD8 194 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 SHTN1A0MZ66 631 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 VPS37CA5D8V6 355 aaPredicted RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 H3BQV1 296 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 KIF3BO15066 747 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 POLR3GO15318 223 aaPredicted RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 DHX16O60231 1041 aaKnown RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 TBC1D12O60347 775 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 PPFIA4O75335 1185 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 TADA3O75528 432 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 ZRANB2O95218 330 aaKnown RBP eCLIP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 NBPF7P0C2Y1 421 aaPredicted RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 CCDC172P0C7W6 258 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 LIG1P18858 919 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 ATP2B1P20020 1258 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 GJB2P29033 226 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 RDXP35241 583 aaKnown RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 ATP6V1AP38606 617 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 PIP4K2AP48426 406 aaPredicted RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 CLCN6P51797 869 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 AK2P54819 239 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 HNRNPH2P55795 449 aaKnown RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 LMNB2Q03252 620 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 KCNA1Q09470 495 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 PTGDRQ13258 359 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 SMC1AQ14683 1233 aaKnown RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 PLCB4Q15147 1175 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 SKIV2LQ15477 1246 aaKnown RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 KIF4BQ2VIQ3 1234 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 DNAJC21Q5F1R6 531 aaKnown RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 IFFO2Q5TF58 517 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 MCTP2Q6DN12 878 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 GIMAP6Q6P9H5 292 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 KRBA2Q6ZNG9 492 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 TAX1BP1Q86VP1 789 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 ANKRD20A12PQ8NF67 263 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 EVI5LQ96CN4 794 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 UBXN6Q9BZV1 441 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 OCEL1Q9H607 264 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 ZSWIM6Q9HCJ5 1215 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 PDRG1Q9NUG6 133 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 DACT1Q9NYF0 836 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 ORC3Q9UBD5 711 aaPredicted RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 RRP15Q9Y3B9 282 aaKnown RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 ZNF330Q9Y3S2 320 aaPredicted RBP3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 JRKLQ9Y4A0 524 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 FHOD1Q9Y613 1164 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 C3P01024 1663 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 TCHHQ07283 1943 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 AKAP12Q02952 1782 aa3.99□□□□□ -1.77
AC006539.3-201ENST00000454258 RGPD1P0DJD0 1748 aa3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 XRN1Q8IZH2 1706 aaKnown RBP3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 FMN2Q9NZ56 1722 aa3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 MAP2P11137 1827 aaKnown RBP3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 OVOS2A0A0G2JMS6 1433 aa3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 TECPR2O15040 1411 aa3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 KDM6AO15550 1401 aaPredicted RBP3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 NCAPD2Q15021 1401 aa3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 A0A087WUV0 522 aaPredicted RBP3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 SPDYE5A6NIY4 337 aa3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 GALR2O43603 387 aaPredicted RBP3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 KIF5CO60282 957 aa3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 GADD45BO75293 160 aaPredicted RBP3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 KIAA0754O94854 1291 aa3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 UBTFL1P0CB47 393 aaPredicted RBP3.98□□□□□ -1.77
AC006539.3-201ENST00000454258 CAPN2P17655 700 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms