RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 RSBN1LQ6PCB5 846 aaPredicted RBP17.87■□□□□ 0.45
RFTN1-207ENST00000453536 TRMT2AQ8IZ69 625 aaKnown RBP17.87■□□□□ 0.45
RFTN1-207ENST00000453536 SRCIN1Q9C0H9 1055 aa17.87■□□□□ 0.45
RFTN1-207ENST00000453536 PCDHAC2Q9Y5I4 1007 aa17.87■□□□□ 0.45
RFTN1-207ENST00000453536 ZNF804BA4D1E1 1349 aa17.87■□□□□ 0.45
RFTN1-207ENST00000453536 ANKRD18BA2A2Z9 1011 aa17.86■□□□□ 0.45
RFTN1-207ENST00000453536 CCER2I3L3R5 266 aa17.86■□□□□ 0.45
RFTN1-207ENST00000453536 PLIN1O60240 522 aa17.86■□□□□ 0.45
RFTN1-207ENST00000453536 AOC2O75106 756 aa17.86■□□□□ 0.45
RFTN1-207ENST00000453536 DEFB115Q30KQ5 88 aa17.86■□□□□ 0.45
RFTN1-207ENST00000453536 PAXIP1Q6ZW49 1069 aaPredicted RBP17.86■□□□□ 0.45
RFTN1-207ENST00000453536 ANKRD44Q8N8A2 993 aa17.86■□□□□ 0.45
RFTN1-207ENST00000453536 KLHDC4Q8TBB5 520 aa17.86■□□□□ 0.45
RFTN1-207ENST00000453536 DPF2Q92785 391 aa17.86■□□□□ 0.45
RFTN1-207ENST00000453536 MPHOSPH8Q99549 860 aa17.86■□□□□ 0.45
RFTN1-207ENST00000453536 GGA3Q9NZ52 723 aa17.86■□□□□ 0.45
RFTN1-207ENST00000453536 C9orf78Q9NZ63 289 aaPredicted RBP17.86■□□□□ 0.45
RFTN1-207ENST00000453536 TNNQ9UQP3 1299 aa17.86■□□□□ 0.45
RFTN1-207ENST00000453536 DACT2Q5SW24 774 aa17.85■□□□□ 0.45
RFTN1-207ENST00000453536 ZIC5Q96T25 663 aa17.85■□□□□ 0.45
RFTN1-207ENST00000453536 BICC1Q9H694 974 aaKnown RBP17.85■□□□□ 0.45
RFTN1-207ENST00000453536 AOX1Q06278 1338 aa17.84■□□□□ 0.45
RFTN1-207ENST00000453536 WDR33Q9C0J8 1336 aaKnown RBP17.84■□□□□ 0.45
RFTN1-207ENST00000453536 USP17L3A6NCW0 530 aa17.84■□□□□ 0.45
RFTN1-207ENST00000453536 USP17L4A6NCW7 530 aa17.84■□□□□ 0.45
RFTN1-207ENST00000453536 ALDH1L1O75891 902 aa17.84■□□□□ 0.45
RFTN1-207ENST00000453536 IFIT5Q13325 482 aaKnown RBP17.84■□□□□ 0.45
RFTN1-207ENST00000453536 USP17L1Q7RTZ2 530 aa17.84■□□□□ 0.45
RFTN1-207ENST00000453536 TLL2Q9Y6L7 1015 aa17.84■□□□□ 0.45
RFTN1-207ENST00000453536 ANGEL2Q5VTE6 544 aaKnown RBP17.83■□□□□ 0.44
RFTN1-207ENST00000453536 PRAMEF18Q5VWM3 479 aa17.83■□□□□ 0.44
RFTN1-207ENST00000453536 CERS5Q8N5B7 392 aa17.83■□□□□ 0.44
RFTN1-207ENST00000453536 CAPNS2Q96L46 248 aa17.83■□□□□ 0.44
RFTN1-207ENST00000453536 SMC4Q9NTJ3 1288 aa17.83■□□□□ 0.44
RFTN1-207ENST00000453536 ZNF609O15014 1411 aa17.82■□□□□ 0.44
RFTN1-207ENST00000453536 SASH1O94885 1247 aa17.82■□□□□ 0.44
RFTN1-207ENST00000453536 RPS12P25398 132 aaKnown RBP17.82■□□□□ 0.44
RFTN1-207ENST00000453536 ZNF280AP59817 542 aaPredicted RBP17.82■□□□□ 0.44
RFTN1-207ENST00000453536 SCARF1Q14162 830 aa17.82■□□□□ 0.44
RFTN1-207ENST00000453536 NBPF9Q3BBW0 867 aa17.82■□□□□ 0.44
RFTN1-207ENST00000453536 LRRC24Q50LG9 513 aa17.82■□□□□ 0.44
RFTN1-207ENST00000453536 KRT26Q7Z3Y9 468 aa17.82■□□□□ 0.44
RFTN1-207ENST00000453536 SAPCD2Q86UD0 394 aa17.82■□□□□ 0.44
RFTN1-207ENST00000453536 TSKSQ9UJT2 592 aa17.82■□□□□ 0.44
RFTN1-207ENST00000453536 UTYO14607 1347 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 KCNJ4P48050 445 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 GTF2IP78347 998 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 IFFO2Q5TF58 517 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 MOB2Q70IA6 237 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 CDC37L1Q7L3B6 337 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 PODNQ7Z5L7 613 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 USP44Q9H0E7 712 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 MYOZ2Q9NPC6 264 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 LEMD3Q9Y2U8 911 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 ECM29Q5VYK3 1845 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 ARAP2Q8WZ64 1704 aa17.81■□□□□ 0.44
RFTN1-207ENST00000453536 USP17L8P0C7I0 530 aa17.8■□□□□ 0.44
RFTN1-207ENST00000453536 CCDC57Q2TAC2 916 aa17.8■□□□□ 0.44
RFTN1-207ENST00000453536 LDHAL6AQ6ZMR3 332 aa17.8■□□□□ 0.44
RFTN1-207ENST00000453536 KIAA0825Q8IV33 1275 aa17.8■□□□□ 0.44
RFTN1-207ENST00000453536 ZC3H15Q8WU90 426 aaKnown RBP17.8■□□□□ 0.44
RFTN1-207ENST00000453536 ANKRD2Q9GZV1 360 aa17.8■□□□□ 0.44
RFTN1-207ENST00000453536 COA1Q9GZY4 146 aa17.8■□□□□ 0.44
RFTN1-207ENST00000453536 CD209Q9NNX6 404 aa17.8■□□□□ 0.44
RFTN1-207ENST00000453536 NOB1Q9ULX3 412 aaKnown RBP17.8■□□□□ 0.44
RFTN1-207ENST00000453536 PTPRCP08575 1304 aa17.79■□□□□ 0.44
RFTN1-207ENST00000453536 TAF7LQ5H9L4 462 aa17.79■□□□□ 0.44
RFTN1-207ENST00000453536 AGBL3Q8NEM8 1001 aa17.79■□□□□ 0.44
RFTN1-207ENST00000453536 CNNM1Q9NRU3 951 aa17.79■□□□□ 0.44
RFTN1-207ENST00000453536 F8W031 263 aaPredicted RBP17.78■□□□□ 0.44
RFTN1-207ENST00000453536 CAPN15O75808 1086 aa17.78■□□□□ 0.44
RFTN1-207ENST00000453536 GYG1P46976 350 aa17.78■□□□□ 0.44
RFTN1-207ENST00000453536 RABL6Q3YEC7 729 aaPredicted RBP17.78■□□□□ 0.44
RFTN1-207ENST00000453536 CDCA5Q96FF9 252 aa17.78■□□□□ 0.44
RFTN1-207ENST00000453536 WBP1LQ9NX94 342 aa17.78■□□□□ 0.44
RFTN1-207ENST00000453536 FZD1Q9UP38 647 aa17.78■□□□□ 0.44
RFTN1-207ENST00000453536 IQSEC3Q9UPP2 1182 aaPredicted RBP17.78■□□□□ 0.44
RFTN1-207ENST00000453536 MYH13Q9UKX3 1938 aa17.78■□□□□ 0.44
RFTN1-207ENST00000453536 GRIK5Q16478 980 aa17.77■□□□□ 0.44
RFTN1-207ENST00000453536 DIEXFQ68CQ4 756 aaKnown RBP17.77■□□□□ 0.44
RFTN1-207ENST00000453536 TTLL5Q6EMB2 1281 aa17.77■□□□□ 0.44
RFTN1-207ENST00000453536 DCPSQ96C86 337 aaKnown RBP17.77■□□□□ 0.44
RFTN1-207ENST00000453536 CASP8AP2Q9UKL3 1982 aa17.77■□□□□ 0.43
RFTN1-207ENST00000453536 LBX1P52954 281 aa17.76■□□□□ 0.43
RFTN1-207ENST00000453536 ALDH1L2Q3SY69 923 aa17.76■□□□□ 0.43
RFTN1-207ENST00000453536 STRIP1Q5VSL9 837 aa17.76■□□□□ 0.43
RFTN1-207ENST00000453536 RIPOR2Q9Y4F9 1068 aa17.76■□□□□ 0.43
RFTN1-207ENST00000453536 WNT10BO00744 389 aa17.75■□□□□ 0.43
RFTN1-207ENST00000453536 BCAR3O75815 825 aa17.75■□□□□ 0.43
RFTN1-207ENST00000453536 HSPA8P11142 646 aaKnown RBP17.75■□□□□ 0.43
RFTN1-207ENST00000453536 RFX5P48382 616 aaPredicted RBP17.75■□□□□ 0.43
RFTN1-207ENST00000453536 RARSP54136 660 aaKnown RBP17.75■□□□□ 0.43
RFTN1-207ENST00000453536 HUNKP57058 714 aa17.75■□□□□ 0.43
RFTN1-207ENST00000453536 GBA2Q9HCG7 927 aaPredicted RBP17.74■□□□□ 0.43
RFTN1-207ENST00000453536 FAM155AB1AL88 458 aaPredicted RBP17.73■□□□□ 0.43
RFTN1-207ENST00000453536 C15orf52Q6ZUT6 534 aaKnown RBP17.73■□□□□ 0.43
RFTN1-207ENST00000453536 SULF1Q8IWU6 871 aa17.73■□□□□ 0.43
RFTN1-207ENST00000453536 TNS4Q8IZW8 715 aa17.73■□□□□ 0.43
RFTN1-207ENST00000453536 VGLL2Q8N8G2 317 aa17.73■□□□□ 0.43
RFTN1-207ENST00000453536 MEIS3Q99687 375 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms