RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 RPGRQ92834 1020 aaKnown RBP7.29□□□□□ -1.24
SDC4P-201ENST00000453285 RBM17Q96I25 401 aaKnown RBP7.29□□□□□ -1.24
SDC4P-201ENST00000453285 C22orf23Q9BZE7 217 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 ANKRD2Q9GZV1 360 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 ANTXR1Q9H6X2 564 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 SNRKQ9NRH2 765 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 RFX7Q2KHR2 1363 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 ZNF804BA4D1E1 1349 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 GOLIM4O00461 696 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 ZBTB22O15209 634 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 EIF5BO60841 1220 aaKnown RBP7.28□□□□□ -1.24
SDC4P-201ENST00000453285 BBOX1O75936 387 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 CHGBP05060 677 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 UQCRFS1P1P0C7P4 283 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 PDE6BP35913 854 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 ZAP70P43403 619 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 BCAMP50895 628 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 GORABQ5T7V8 394 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 CASC1Q6TDU7 716 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 PI16Q6UXB8 463 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 FBXO33Q7Z6M2 555 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 TICAM2Q86XR7 235 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 FAM84BQ96KN1 310 aaPredicted RBP7.28□□□□□ -1.24
SDC4P-201ENST00000453285 DNAJC2Q99543 621 aaKnown RBP7.28□□□□□ -1.24
SDC4P-201ENST00000453285 KIF2CQ99661 725 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 PAG1Q9NWQ8 432 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 ZNF646O15015 1829 aaPredicted RBP7.28□□□□□ -1.24
SDC4P-201ENST00000453285 MYH2Q9UKX2 1941 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 CDK5RAP2Q96SN8 1893 aa7.28□□□□□ -1.24
SDC4P-201ENST00000453285 A0A0D9SFI3 127 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 HIP1O00291 1037 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 EPB41L2O43491 1005 aaKnown RBP7.27□□□□□ -1.25
SDC4P-201ENST00000453285 CYP2E1P05181 493 aaPredicted RBP7.27□□□□□ -1.25
SDC4P-201ENST00000453285 NPR1P16066 1061 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 KLRK1P26718 216 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 GYG1P46976 350 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 GPSM2P81274 684 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 NMIQ13287 307 aaPredicted RBP7.27□□□□□ -1.25
SDC4P-201ENST00000453285 CWC27Q6UX04 472 aaKnown RBP7.27□□□□□ -1.25
SDC4P-201ENST00000453285 C15orf52Q6ZUT6 534 aaKnown RBP7.27□□□□□ -1.25
SDC4P-201ENST00000453285 TXNRD3Q86VQ6 643 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 SP8Q8IXZ3 490 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 MASTLQ96GX5 879 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 FAM227BQ96M60 508 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 FSD1Q9BTV5 496 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 LSG1Q9H089 658 aaKnown RBP7.27□□□□□ -1.25
SDC4P-201ENST00000453285 UPF2Q9HAU5 1272 aaKnown RBP7.27□□□□□ -1.25
SDC4P-201ENST00000453285 HMG20BQ9P0W2 317 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 LEMD3Q9Y2U8 911 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 DUOX1Q9NRD9 1551 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 PSME4Q14997 1843 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 C10orf71Q711Q0 1435 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 XDHP47989 1333 aa7.27□□□□□ -1.25
SDC4P-201ENST00000453285 SCN9AQ15858 1988 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 COL1A1P02452 1464 aaPredicted RBP7.26□□□□□ -1.25
SDC4P-201ENST00000453285 MED23Q9ULK4 1368 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 REC8O95072 547 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 ALDH1B1P30837 517 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 FKBP4Q02790 459 aaKnown RBP eCLIP7.26□□□□□ -1.25
SDC4P-201ENST00000453285 RASGRF1Q13972 1273 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 SLFNL1Q499Z3 407 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 ZMYM1Q5SVZ6 1142 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 STYK1Q6J9G0 422 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 TMC4Q7Z404 712 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 C2CD5Q86YS7 1000 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 SPATA5Q8NB90 893 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 RUFY2Q8WXA3 655 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 IL17RAQ96F46 866 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 PIH1D3Q9NQM4 214 aaKnown RBP7.26□□□□□ -1.25
SDC4P-201ENST00000453285 DIAPH3Q9NSV4 1193 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 PODXL2Q9NZ53 605 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 ATP6V0A2Q9Y487 856 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 BAZ2AQ9UIF9 1905 aaKnown RBP7.26□□□□□ -1.25
SDC4P-201ENST00000453285 FER1L6Q2WGJ9 1857 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 RAD50Q92878 1312 aa7.26□□□□□ -1.25
SDC4P-201ENST00000453285 MAST2Q6P0Q8 1798 aa7.25□□□□□ -1.25
SDC4P-201ENST00000453285 H0YIN7 160 aa7.25□□□□□ -1.25
SDC4P-201ENST00000453285 PPEF1O14829 653 aaPredicted RBP7.25□□□□□ -1.25
SDC4P-201ENST00000453285 RNF113AO15541 343 aaKnown RBP7.25□□□□□ -1.25
SDC4P-201ENST00000453285 ATP2B4P23634 1241 aa7.25□□□□□ -1.25
SDC4P-201ENST00000453285 CHRNA5P30532 468 aa7.25□□□□□ -1.25
SDC4P-201ENST00000453285 ANP32AP39687 249 aaKnown RBP7.25□□□□□ -1.25
SDC4P-201ENST00000453285 PTH1RQ03431 593 aa7.25□□□□□ -1.25
SDC4P-201ENST00000453285 ZNF589Q86UQ0 364 aaPredicted RBP7.25□□□□□ -1.25
SDC4P-201ENST00000453285 SEC62Q99442 399 aaKnown RBP7.25□□□□□ -1.25
SDC4P-201ENST00000453285 HELLSQ9NRZ9 838 aa7.25□□□□□ -1.25
SDC4P-201ENST00000453285 POLLQ9UGP5 575 aa7.25□□□□□ -1.25
SDC4P-201ENST00000453285 SNED1Q8TER0 1413 aa7.25□□□□□ -1.25
SDC4P-201ENST00000453285 TCRBV5S4A2TA0A5A2 114 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 SEMA3EO15041 775 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 KCNA3P22001 575 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 HIBADHP31937 336 aaKnown RBP7.24□□□□□ -1.25
SDC4P-201ENST00000453285 HSPA4P34932 840 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 ADD2P35612 726 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 KCNJ4P48050 445 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 R3HDM1Q15032 1099 aaKnown RBP7.24□□□□□ -1.25
SDC4P-201ENST00000453285 TTF1Q15361 905 aaPredicted RBP7.24□□□□□ -1.25
SDC4P-201ENST00000453285 MCMDC2Q4G0Z9 681 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 CAVIN4Q5BKX8 364 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 OLFM4Q6UX06 510 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms