RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 MAP2K2P36507 400 aa12.74□□□□□ -0.37
CHL1-208ENST00000453040 C11orf57Q6ZUT1 292 aaPredicted RBP12.74□□□□□ -0.37
CHL1-208ENST00000453040 ENGASEQ8NFI3 743 aa12.74□□□□□ -0.37
CHL1-208ENST00000453040 CCT2P78371 535 aaKnown RBP12.73□□□□□ -0.37
CHL1-208ENST00000453040 HSD3B7Q9H2F3 369 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 PLEKHA4Q9H4M7 779 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 TRDNQ13061 729 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 MTX1Q13505 466 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 HSP90AB2PQ58FF8 381 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 FBXO31Q5XUX0 539 aaPredicted RBP12.73□□□□□ -0.37
CHL1-208ENST00000453040 NUTM1Q86Y26 1132 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 CCDC83Q8IWF9 413 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 OTUD6BQ8N6M0 293 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 LEO1Q8WVC0 666 aaPredicted RBP12.73□□□□□ -0.37
CHL1-208ENST00000453040 MAP4K1Q92918 833 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 RILPL2Q969X0 211 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 CSB-PGBD3P0DP91 1061 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 RESTQ13127 1097 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 ARHGAP29Q52LW3 1261 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 RSRC2Q7L4I2 434 aaKnown RBP12.73□□□□□ -0.37
CHL1-208ENST00000453040 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
CHL1-208ENST00000453040 CCDC196A0A1B0GTZ2 297 aa12.72□□□□□ -0.37
CHL1-208ENST00000453040 LRCH2Q5VUJ6 765 aa12.72□□□□□ -0.37
CHL1-208ENST00000453040 RHPN1Q8TCX5 695 aa12.72□□□□□ -0.37
CHL1-208ENST00000453040 DACT1Q9NYF0 836 aa12.72□□□□□ -0.37
CHL1-208ENST00000453040 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
CHL1-208ENST00000453040 GPTP24298 496 aa12.72□□□□□ -0.37
CHL1-208ENST00000453040 MAP3K11Q16584 847 aa12.72□□□□□ -0.37
CHL1-208ENST00000453040 IRX2Q9BZI1 471 aaPredicted RBP12.72□□□□□ -0.37
CHL1-208ENST00000453040 C5P01031 1676 aa12.72□□□□□ -0.37
CHL1-208ENST00000453040 SPG7Q9UQ90 795 aa12.72□□□□□ -0.37
CHL1-208ENST00000453040 USP16Q9Y5T5 823 aa12.72□□□□□ -0.37
CHL1-208ENST00000453040 EXOC5O00471 708 aa12.71□□□□□ -0.37
CHL1-208ENST00000453040 MAP4K4O95819 1239 aaPredicted RBP12.71□□□□□ -0.37
CHL1-208ENST00000453040 CASTP20810 708 aaKnown RBP12.71□□□□□ -0.37
CHL1-208ENST00000453040 ILDR1Q86SU0 546 aaPredicted RBP12.71□□□□□ -0.37
CHL1-208ENST00000453040 FBXW10Q5XX13 1052 aa12.71□□□□□ -0.37
CHL1-208ENST00000453040 TLDC1Q6P9B6 456 aa12.71□□□□□ -0.37
CHL1-208ENST00000453040 NUDT16Q96DE0 195 aaKnown RBP12.71□□□□□ -0.37
CHL1-208ENST00000453040 GOLPH3LQ9H4A5 285 aa12.71□□□□□ -0.37
CHL1-208ENST00000453040 IL1RAPL2Q9NP60 686 aa12.71□□□□□ -0.37
CHL1-208ENST00000453040 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.71□□□□□ -0.37
CHL1-208ENST00000453040 PARP3Q9Y6F1 533 aa12.71□□□□□ -0.37
CHL1-208ENST00000453040 DIP2BQ9P265 1576 aa12.71□□□□□ -0.37
CHL1-208ENST00000453040 RAPGEF3O95398 923 aa12.71□□□□□ -0.38
CHL1-208ENST00000453040 CAMK4Q16566 473 aa12.71□□□□□ -0.38
CHL1-208ENST00000453040 RPAINQ86UA6 219 aa12.71□□□□□ -0.38
CHL1-208ENST00000453040 OSBPL5Q9H0X9 879 aaPredicted RBP12.71□□□□□ -0.38
CHL1-208ENST00000453040 SH2B1Q9NRF2 756 aaPredicted RBP12.71□□□□□ -0.38
CHL1-208ENST00000453040 ADAMTS13Q76LX8 1427 aa12.71□□□□□ -0.38
CHL1-208ENST00000453040 RAB11FIP3O75154 756 aa12.71□□□□□ -0.38
CHL1-208ENST00000453040 TADA2BQ86TJ2 420 aa12.71□□□□□ -0.38
CHL1-208ENST00000453040 NCAPD2Q15021 1401 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 ATP8B1O43520 1251 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 USPL1Q5W0Q7 1092 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 MNS1Q8NEH6 495 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 CCDC34Q96HJ3 373 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 ROBO2Q9HCK4 1378 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 TTC36A6NLP5 189 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 FAM228AQ86W67 206 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 NECAB1Q8N987 351 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 NUP62CLQ9H1M0 184 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 SALL1Q9NSC2 1324 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 GLI3P10071 1580 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 CKAP2LQ8IYA6 745 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 PPM1EQ8WY54 764 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
CHL1-208ENST00000453040 TTC41PQ6P2S7 1318 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 NPHP3Q7Z494 1330 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 KIF3CO14782 793 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 NBPF7P0C2Y1 421 aaPredicted RBP12.69□□□□□ -0.38
CHL1-208ENST00000453040 KCNJ6P48051 423 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 PPP1R42Q7Z4L9 355 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 PPP1R13BQ96KQ4 1090 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 SMC3Q9UQE7 1217 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 HEG1Q9ULI3 1381 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 SLIT1O75093 1534 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 SCRN1Q12765 414 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 TPD52L1Q16890 204 aaPredicted RBP12.69□□□□□ -0.38
CHL1-208ENST00000453040 BEND3Q5T5X7 828 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 WLSQ5T9L3 541 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 PRPF38AQ8NAV1 312 aaKnown RBP12.69□□□□□ -0.38
CHL1-208ENST00000453040 DNAJC25Q9H1X3 360 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 ANKRD20A12PQ8NF67 263 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 KAZALD1Q96I82 304 aa12.69□□□□□ -0.38
CHL1-208ENST00000453040 LARP1Q6PKG0 1096 aaKnown RBP12.68□□□□□ -0.38
CHL1-208ENST00000453040 IL17REQ8NFR9 667 aa12.68□□□□□ -0.38
CHL1-208ENST00000453040 STAG1Q8WVM7 1258 aa12.68□□□□□ -0.38
CHL1-208ENST00000453040 THOC1Q96FV9 657 aaKnown RBP12.68□□□□□ -0.38
CHL1-208ENST00000453040 ZSCAN31Q96LW9 406 aaPredicted RBP12.68□□□□□ -0.38
CHL1-208ENST00000453040 PLCD4Q9BRC7 762 aa12.68□□□□□ -0.38
CHL1-208ENST00000453040 ATP6V1DQ9Y5K8 247 aa12.68□□□□□ -0.38
CHL1-208ENST00000453040 DDR1Q08345 913 aa12.68□□□□□ -0.38
CHL1-208ENST00000453040 ARMCX5Q6P1M9 558 aa12.68□□□□□ -0.38
CHL1-208ENST00000453040 ZNF592Q92610 1267 aa12.68□□□□□ -0.38
CHL1-208ENST00000453040 COG3Q96JB2 828 aa12.68□□□□□ -0.38
CHL1-208ENST00000453040 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
CHL1-208ENST00000453040 CDCA2Q69YH5 1023 aaPredicted RBP12.68□□□□□ -0.38
CHL1-208ENST00000453040 ZKSCAN4Q969J2 545 aaPredicted RBP12.68□□□□□ -0.38
CHL1-208ENST00000453040 SUGCTQ9HAC7 445 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms