RNA–Protein interactions for RNA: ENST00000452668.1

CHKB-CPT1B-201, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 4

Gene CHKB-CPT1B, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-201ENST00000452668 LEMD3Q9Y2U8 911 aa15.16■□□□□ 0.02
CHKB-CPT1B-201ENST00000452668 MMP14P50281 582 aa15.15■□□□□ 0.02
CHKB-CPT1B-201ENST00000452668 KIF23Q02241 960 aaPredicted RBP15.15■□□□□ 0.02
CHKB-CPT1B-201ENST00000452668 FLIIQ13045 1269 aa15.15■□□□□ 0.02
CHKB-CPT1B-201ENST00000452668 DGKZQ13574 1117 aa15.15■□□□□ 0.02
CHKB-CPT1B-201ENST00000452668 SAGE1Q9NXZ1 904 aa15.15■□□□□ 0.02
CHKB-CPT1B-201ENST00000452668 PITPNM2Q9BZ72 1349 aa15.15■□□□□ 0.02
CHKB-CPT1B-201ENST00000452668 H7C1W4 665 aa15.14■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 ITGA6P23229 1130 aa15.14■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 GCKRQ14397 625 aa15.14■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 NCBP3Q53F19 620 aaKnown RBP15.14■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 DNAAF4Q8WXU2 420 aa15.14■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 ZNF609O15014 1411 aa15.14■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 ANKRD18BA2A2Z9 1011 aa15.13■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 STRIP1Q5VSL9 837 aa15.13■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 MCOLN1Q9GZU1 580 aa15.13■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 CHMP3Q9Y3E7 222 aa15.13■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 SALL2Q9Y467 1007 aaPredicted RBP15.13■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 ZNF804BA4D1E1 1349 aa15.13■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 COL4A1P02462 1669 aa15.12■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 TRPA1O75762 1119 aa15.12■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 SLC10A3P09131 477 aa15.12■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 ZEB1P37275 1124 aaPredicted RBP15.12■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 MLLT1Q03111 559 aaPredicted RBP15.12■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 TTLL5Q6EMB2 1281 aa15.12■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 G2E3Q7L622 706 aa15.12■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 WDR63Q8IWG1 891 aa15.12■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 GMLQ99445 158 aa15.12■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 PLA2G12BQ9BX93 195 aa15.12■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 ASTN2O75129 1339 aaPredicted RBP15.12■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 FAM155AB1AL88 458 aaPredicted RBP15.11■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 IFIT5Q13325 482 aaKnown RBP15.11■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 FAM161AQ3B820 660 aa15.11■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 TAF7LQ5H9L4 462 aa15.11■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 ZIC5Q96T25 663 aa15.11■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 FANCIQ9NVI1 1328 aa15.11■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 CCDC184Q52MB2 194 aa15.1■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 DACT2Q5SW24 774 aa15.1■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 APOBEC3FQ8IUX4 373 aaKnown RBP15.1■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 RNF186Q9NXI6 227 aa15.1■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 GTF2IP78347 998 aa15.09■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 NBPF9Q3BBW0 867 aa15.09■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 ARMC9Q7Z3E5 817 aa15.09■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 SCN9AQ15858 1988 aa15.09■□□□□ 0.01
CHKB-CPT1B-201ENST00000452668 MYO1BO43795 1136 aa15.08■□□□□ 0
CHKB-CPT1B-201ENST00000452668 CSF1RP07333 972 aa15.08■□□□□ 0
CHKB-CPT1B-201ENST00000452668 EXOSC9Q06265 439 aaKnown RBP15.08■□□□□ 0
CHKB-CPT1B-201ENST00000452668 CHRNDQ07001 517 aa15.08■□□□□ 0
CHKB-CPT1B-201ENST00000452668 CCDC57Q2TAC2 916 aa15.08■□□□□ 0
CHKB-CPT1B-201ENST00000452668 ZNF804AQ7Z570 1209 aa15.08■□□□□ 0
CHKB-CPT1B-201ENST00000452668 RASAL3Q86YV0 1011 aa15.08■□□□□ 0
CHKB-CPT1B-201ENST00000452668 KIAA0825Q8IV33 1275 aa15.08■□□□□ 0
CHKB-CPT1B-201ENST00000452668 CSRNP1Q96S65 589 aa15.08■□□□□ 0
CHKB-CPT1B-201ENST00000452668 MXD3Q9BW11 206 aa15.08■□□□□ 0
CHKB-CPT1B-201ENST00000452668 C9orf78Q9NZ63 289 aaPredicted RBP15.08■□□□□ 0
CHKB-CPT1B-201ENST00000452668 POLR2AP24928 1970 aaKnown RBP15.07■□□□□ 0
CHKB-CPT1B-201ENST00000452668 WTIPA6NIX2 430 aaPredicted RBP15.07■□□□□ 0
CHKB-CPT1B-201ENST00000452668 UBE2Q2LH0YL09 131 aa15.07■□□□□ 0
CHKB-CPT1B-201ENST00000452668 WNT10BO00744 389 aa15.07■□□□□ 0
CHKB-CPT1B-201ENST00000452668 VAMP4O75379 141 aa15.07■□□□□ 0
CHKB-CPT1B-201ENST00000452668 SASH1O94885 1247 aa15.07■□□□□ 0
CHKB-CPT1B-201ENST00000452668 DLGAP5Q15398 846 aa15.07■□□□□ 0
CHKB-CPT1B-201ENST00000452668 MYH3P11055 1940 aa15.07■□□□□ 0
CHKB-CPT1B-201ENST00000452668 SREBF2Q12772 1141 aa15.06■□□□□ 0
CHKB-CPT1B-201ENST00000452668 PRAMEF18Q5VWM3 479 aa15.06■□□□□ 0
CHKB-CPT1B-201ENST00000452668 TXNRD3Q86VQ6 643 aa15.06■□□□□ 0
CHKB-CPT1B-201ENST00000452668 CD209Q9NNX6 404 aa15.06■□□□□ 0
CHKB-CPT1B-201ENST00000452668 CNNM1Q9NRU3 951 aa15.06■□□□□ 0
CHKB-CPT1B-201ENST00000452668 SCAF8Q9UPN6 1271 aaKnown RBP15.06■□□□□ 0
CHKB-CPT1B-201ENST00000452668 PAPPA2Q9BXP8 1791 aa15.06■□□□□ 0
CHKB-CPT1B-201ENST00000452668 PLIN1O60240 522 aa15.05■□□□□ -0
CHKB-CPT1B-201ENST00000452668 CASP7P55210 303 aa15.05■□□□□ -0
CHKB-CPT1B-201ENST00000452668 LDHAL6AQ6ZMR3 332 aa15.05■□□□□ -0
CHKB-CPT1B-201ENST00000452668 CASP8AP2Q9UKL3 1982 aa15.05■□□□□ -0
CHKB-CPT1B-201ENST00000452668 F6X3S4 739 aa15.04■□□□□ -0
CHKB-CPT1B-201ENST00000452668 TAF5LO75529 589 aa15.04■□□□□ -0
CHKB-CPT1B-201ENST00000452668 RGS19P49795 217 aa15.04■□□□□ -0
CHKB-CPT1B-201ENST00000452668 RBM5P52756 815 aaKnown RBP eCLIP15.04■□□□□ -0
CHKB-CPT1B-201ENST00000452668 PRKG1Q13976 671 aa15.04■□□□□ -0
CHKB-CPT1B-201ENST00000452668 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
CHKB-CPT1B-201ENST00000452668 LMBR1LQ6UX01 489 aa15.04■□□□□ -0
CHKB-CPT1B-201ENST00000452668 MOB2Q70IA6 237 aa15.04■□□□□ -0
CHKB-CPT1B-201ENST00000452668 CTU1Q7Z7A3 348 aaKnown RBP15.04■□□□□ -0
CHKB-CPT1B-201ENST00000452668 FAM9BQ8IZU0 186 aa15.04■□□□□ -0
CHKB-CPT1B-201ENST00000452668 HELBQ8NG08 1087 aaPredicted RBP15.04■□□□□ -0
CHKB-CPT1B-201ENST00000452668 PSME4Q14997 1843 aa15.03■□□□□ -0
CHKB-CPT1B-201ENST00000452668 SPEF2Q9C093 1822 aa15.03■□□□□ -0
CHKB-CPT1B-201ENST00000452668 ZNF316A6NFI3 1004 aaPredicted RBP15.03■□□□□ -0
CHKB-CPT1B-201ENST00000452668 GRM8O00222 908 aa15.03■□□□□ -0
CHKB-CPT1B-201ENST00000452668 PPP1R12BO60237 982 aaPredicted RBP15.03■□□□□ -0
CHKB-CPT1B-201ENST00000452668 KLRK1P26718 216 aa15.03■□□□□ -0
CHKB-CPT1B-201ENST00000452668 BEND3Q5T5X7 828 aa15.03■□□□□ -0
CHKB-CPT1B-201ENST00000452668 AKAP11Q9UKA4 1901 aa15.02■□□□□ -0
CHKB-CPT1B-201ENST00000452668 F8W031 263 aaPredicted RBP15.02■□□□□ -0
CHKB-CPT1B-201ENST00000452668 ALDH1L1O75891 902 aa15.02■□□□□ -0
CHKB-CPT1B-201ENST00000452668 FOXO4P98177 505 aa15.02■□□□□ -0
CHKB-CPT1B-201ENST00000452668 MKRN3Q13064 507 aaKnown RBP15.02■□□□□ -0
CHKB-CPT1B-201ENST00000452668 PKN2Q16513 984 aaKnown RBP15.02■□□□□ -0
CHKB-CPT1B-201ENST00000452668 SUPT20HL1Q3ZLR7 823 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms