RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 RIMBP2O15034 1052 aa24.95■■□□□ 1.58
COL9A3-202ENST00000452372 CHRNDQ07001 517 aa24.95■■□□□ 1.58
COL9A3-202ENST00000452372 DEFB115Q30KQ5 88 aa24.95■■□□□ 1.58
COL9A3-202ENST00000452372 GPR101Q96P66 508 aaPredicted RBP24.95■■□□□ 1.58
COL9A3-202ENST00000452372 CNNM1Q9NRU3 951 aa24.95■■□□□ 1.58
COL9A3-202ENST00000452372 LEMD3Q9Y2U8 911 aa24.95■■□□□ 1.58
COL9A3-202ENST00000452372 TRPM7Q96QT4 1865 aa24.94■■□□□ 1.58
COL9A3-202ENST00000452372 WTIPA6NIX2 430 aaPredicted RBP24.93■■□□□ 1.58
COL9A3-202ENST00000452372 ITPRIPQ8IWB1 547 aa24.93■■□□□ 1.58
COL9A3-202ENST00000452372 PANK1Q8TE04 598 aa24.93■■□□□ 1.58
COL9A3-202ENST00000452372 DBNDD1Q9H9R9 158 aa24.93■■□□□ 1.58
COL9A3-202ENST00000452372 CNOT7Q9UIV1 285 aaKnown RBP24.93■■□□□ 1.58
COL9A3-202ENST00000452372 ZBTB12Q9Y330 459 aaPredicted RBP24.93■■□□□ 1.58
COL9A3-202ENST00000452372 PSMD14O00487 310 aa24.92■■□□□ 1.58
COL9A3-202ENST00000452372 FOXN1O15353 648 aa24.92■■□□□ 1.58
COL9A3-202ENST00000452372 GNAI2P04899 355 aa24.92■■□□□ 1.58
COL9A3-202ENST00000452372 RFX5P48382 616 aaPredicted RBP24.92■■□□□ 1.58
COL9A3-202ENST00000452372 TRPM4Q8TD43 1214 aa24.92■■□□□ 1.58
COL9A3-202ENST00000452372 PUS3Q9BZE2 481 aaKnown RBP24.92■■□□□ 1.58
COL9A3-202ENST00000452372 RIPOR2Q9Y4F9 1068 aa24.92■■□□□ 1.58
COL9A3-202ENST00000452372 ZNF804BA4D1E1 1349 aa24.91■■□□□ 1.58
COL9A3-202ENST00000452372 ZBTB7BO15156 539 aaPredicted RBP24.91■■□□□ 1.58
COL9A3-202ENST00000452372 PLIN1O60240 522 aa24.91■■□□□ 1.58
COL9A3-202ENST00000452372 DOK7Q18PE1 504 aa24.91■■□□□ 1.58
COL9A3-202ENST00000452372 HELBQ8NG08 1087 aaPredicted RBP24.91■■□□□ 1.58
COL9A3-202ENST00000452372 WBP1LQ9NX94 342 aa24.91■■□□□ 1.58
COL9A3-202ENST00000452372 SCN9AQ15858 1988 aa24.91■■□□□ 1.58
COL9A3-202ENST00000452372 TAF5LO75529 589 aa24.9■■□□□ 1.58
COL9A3-202ENST00000452372 PTPN12Q05209 780 aaKnown RBP24.9■■□□□ 1.58
COL9A3-202ENST00000452372 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.9■■□□□ 1.58
COL9A3-202ENST00000452372 KLHDC4Q8TBB5 520 aa24.9■■□□□ 1.58
COL9A3-202ENST00000452372 DPF2Q92785 391 aa24.9■■□□□ 1.58
COL9A3-202ENST00000452372 POLR2AP24928 1970 aaKnown RBP24.9■■□□□ 1.58
COL9A3-202ENST00000452372 MED23Q9ULK4 1368 aa24.9■■□□□ 1.58
COL9A3-202ENST00000452372 WDR33Q9C0J8 1336 aaKnown RBP24.89■■□□□ 1.58
COL9A3-202ENST00000452372 MTX1Q13505 466 aa24.89■■□□□ 1.58
COL9A3-202ENST00000452372 TNS4Q8IZW8 715 aa24.89■■□□□ 1.58
COL9A3-202ENST00000452372 ZC3H15Q8WU90 426 aaKnown RBP24.89■■□□□ 1.58
COL9A3-202ENST00000452372 GLIS2Q9BZE0 524 aaPredicted RBP24.89■■□□□ 1.58
COL9A3-202ENST00000452372 ABT1Q9ULW3 272 aaKnown RBP24.89■■□□□ 1.58
COL9A3-202ENST00000452372 A0A1B0GUL6 1792 aa24.89■■□□□ 1.57
COL9A3-202ENST00000452372 MROH5Q6ZUA9 1318 aa24.88■■□□□ 1.57
COL9A3-202ENST00000452372 ECE2O60344 883 aa24.88■■□□□ 1.57
COL9A3-202ENST00000452372 KCNJ4P48050 445 aa24.88■■□□□ 1.57
COL9A3-202ENST00000452372 LRRC24Q50LG9 513 aa24.88■■□□□ 1.57
COL9A3-202ENST00000452372 MICALL2Q8IY33 904 aa24.88■■□□□ 1.57
COL9A3-202ENST00000452372 G3V3G9 751 aa24.87■■□□□ 1.57
COL9A3-202ENST00000452372 EGFRP00533 1210 aa24.87■■□□□ 1.57
COL9A3-202ENST00000452372 DCAF8Q5TAQ9 597 aa24.87■■□□□ 1.57
COL9A3-202ENST00000452372 H7C1D1 291 aa24.86■■□□□ 1.57
COL9A3-202ENST00000452372 SNAP23O00161 211 aa24.86■■□□□ 1.57
COL9A3-202ENST00000452372 EYA2O00167 538 aa24.86■■□□□ 1.57
COL9A3-202ENST00000452372 PDE3AQ14432 1141 aa24.86■■□□□ 1.57
COL9A3-202ENST00000452372 SAMD7Q7Z3H4 446 aa24.86■■□□□ 1.57
COL9A3-202ENST00000452372 FBXO3Q9UK99 471 aa24.86■■□□□ 1.57
COL9A3-202ENST00000452372 TLL2Q9Y6L7 1015 aa24.86■■□□□ 1.57
COL9A3-202ENST00000452372 SRGAP3O43295 1099 aa24.85■■□□□ 1.57
COL9A3-202ENST00000452372 VIL1P09327 827 aaKnown RBP24.85■■□□□ 1.57
COL9A3-202ENST00000452372 MVPQ14764 893 aaKnown RBP24.85■■□□□ 1.57
COL9A3-202ENST00000452372 C15orf52Q6ZUT6 534 aaKnown RBP24.85■■□□□ 1.57
COL9A3-202ENST00000452372 PODNQ7Z5L7 613 aa24.85■■□□□ 1.57
COL9A3-202ENST00000452372 TXNRD3Q86VQ6 643 aa24.85■■□□□ 1.57
COL9A3-202ENST00000452372 COPRSQ9NQ92 184 aa24.85■■□□□ 1.57
COL9A3-202ENST00000452372 DLK2Q6UY11 383 aa24.84■■□□□ 1.57
COL9A3-202ENST00000452372 IRS2Q9Y4H2 1338 aa24.84■■□□□ 1.57
COL9A3-202ENST00000452372 RPS12P25398 132 aaKnown RBP24.83■■□□□ 1.57
COL9A3-202ENST00000452372 KLRK1P26718 216 aa24.83■■□□□ 1.57
COL9A3-202ENST00000452372 UBE4AQ14139 1066 aa24.83■■□□□ 1.57
COL9A3-202ENST00000452372 METTL24Q5JXM2 366 aa24.83■■□□□ 1.57
COL9A3-202ENST00000452372 CYP4F22Q6NT55 531 aa24.83■■□□□ 1.57
COL9A3-202ENST00000452372 CAPNS2Q96L46 248 aa24.83■■□□□ 1.57
COL9A3-202ENST00000452372 COA1Q9GZY4 146 aa24.83■■□□□ 1.57
COL9A3-202ENST00000452372 DDX19BQ9UMR2 479 aa24.83■■□□□ 1.57
COL9A3-202ENST00000452372 COG6Q9Y2V7 657 aa24.83■■□□□ 1.57
COL9A3-202ENST00000452372 CIAO1O76071 339 aa24.82■■□□□ 1.56
COL9A3-202ENST00000452372 PDE8BO95263 885 aa24.82■■□□□ 1.56
COL9A3-202ENST00000452372 CELF2O95319 508 aaKnown RBP24.82■■□□□ 1.56
COL9A3-202ENST00000452372 TBC1D10BQ4KMP7 808 aaPredicted RBP24.82■■□□□ 1.56
COL9A3-202ENST00000452372 CDC37L1Q7L3B6 337 aa24.82■■□□□ 1.56
COL9A3-202ENST00000452372 ATG9AQ7Z3C6 839 aa24.82■■□□□ 1.56
COL9A3-202ENST00000452372 SAPCD2Q86UD0 394 aa24.82■■□□□ 1.56
COL9A3-202ENST00000452372 VGLL2Q8N8G2 317 aa24.82■■□□□ 1.56
COL9A3-202ENST00000452372 PRDM10Q9NQV6 1147 aa24.82■■□□□ 1.56
COL9A3-202ENST00000452372 CTCFP49711 727 aaPredicted RBP24.81■■□□□ 1.56
COL9A3-202ENST00000452372 ATP8B2P98198 1209 aa24.81■■□□□ 1.56
COL9A3-202ENST00000452372 C20orf194Q5TEA3 1177 aa24.81■■□□□ 1.56
COL9A3-202ENST00000452372 USP48Q86UV5 1035 aa24.81■■□□□ 1.56
COL9A3-202ENST00000452372 SIL1Q9H173 461 aa24.81■■□□□ 1.56
COL9A3-202ENST00000452372 C1orf115Q9H7X2 142 aa24.81■■□□□ 1.56
COL9A3-202ENST00000452372 PA2G4Q9UQ80 394 aaKnown RBP24.81■■□□□ 1.56
COL9A3-202ENST00000452372 PNMA6EA0A0J9YXQ4 647 aa24.8■■□□□ 1.56
COL9A3-202ENST00000452372 IL15P40933 162 aaPredicted RBP24.79■■□□□ 1.56
COL9A3-202ENST00000452372 CHMP4BQ9H444 224 aaKnown RBP24.79■■□□□ 1.56
COL9A3-202ENST00000452372 PSME4Q14997 1843 aa24.78■■□□□ 1.56
COL9A3-202ENST00000452372 LBX1P52954 281 aa24.78■■□□□ 1.56
COL9A3-202ENST00000452372 MAP2K1Q02750 393 aaPredicted RBP24.78■■□□□ 1.56
COL9A3-202ENST00000452372 RBM26Q5T8P6 1007 aaKnown RBP24.78■■□□□ 1.56
COL9A3-202ENST00000452372 AIDAQ96BJ3 306 aa24.78■■□□□ 1.56
COL9A3-202ENST00000452372 GMLQ99445 158 aa24.78■■□□□ 1.56
COL9A3-202ENST00000452372 CD209Q9NNX6 404 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms