RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 BSDC1Q9NW68 430 aaPredicted RBP13.98□□□□□ -0.17
USP1-204ENST00000452143 IL16Q14005 1332 aa13.97□□□□□ -0.17
USP1-204ENST00000452143 USP17L3A6NCW0 530 aa13.97□□□□□ -0.17
USP1-204ENST00000452143 USP17L4A6NCW7 530 aa13.97□□□□□ -0.17
USP1-204ENST00000452143 USP17L8P0C7I0 530 aa13.97□□□□□ -0.17
USP1-204ENST00000452143 FKBP1BP68106 108 aa13.97□□□□□ -0.17
USP1-204ENST00000452143 DLK2Q6UY11 383 aa13.97□□□□□ -0.17
USP1-204ENST00000452143 USP17L1Q7RTZ2 530 aa13.97□□□□□ -0.17
USP1-204ENST00000452143 TTLL11Q8NHH1 800 aa13.97□□□□□ -0.17
USP1-204ENST00000452143 TSR2Q969E8 191 aaKnown RBP13.97□□□□□ -0.17
USP1-204ENST00000452143 CDCA5Q96FF9 252 aa13.97□□□□□ -0.17
USP1-204ENST00000452143 GMLQ99445 158 aa13.97□□□□□ -0.17
USP1-204ENST00000452143 MYOZ2Q9NPC6 264 aa13.97□□□□□ -0.17
USP1-204ENST00000452143 A0A1B0GUL6 1792 aa13.96□□□□□ -0.17
USP1-204ENST00000452143 MYO3BQ8WXR4 1341 aa13.96□□□□□ -0.17
USP1-204ENST00000452143 NEURL1BA8MQ27 555 aa13.96□□□□□ -0.17
USP1-204ENST00000452143 SLC10A3P09131 477 aa13.96□□□□□ -0.17
USP1-204ENST00000452143 ZNF157P51786 506 aaPredicted RBP13.96□□□□□ -0.17
USP1-204ENST00000452143 TWISTNBQ3B726 338 aaPredicted RBP13.96□□□□□ -0.17
USP1-204ENST00000452143 ANGEL2Q5VTE6 544 aaKnown RBP13.96□□□□□ -0.17
USP1-204ENST00000452143 JARID2Q92833 1246 aaPredicted RBP13.96□□□□□ -0.17
USP1-204ENST00000452143 GREM2Q9H772 168 aa13.96□□□□□ -0.17
USP1-204ENST00000452143 SCARF1Q14162 830 aa13.95□□□□□ -0.18
USP1-204ENST00000452143 CWF19L2Q2TBE0 894 aaKnown RBP13.95□□□□□ -0.18
USP1-204ENST00000452143 WWC1Q8IX03 1113 aa13.95□□□□□ -0.18
USP1-204ENST00000452143 ZIC5Q96T25 663 aa13.95□□□□□ -0.18
USP1-204ENST00000452143 MCOLN1Q9GZU1 580 aa13.95□□□□□ -0.18
USP1-204ENST00000452143 MINPP1Q9UNW1 487 aa13.95□□□□□ -0.18
USP1-204ENST00000452143 ASTN2O75129 1339 aaPredicted RBP13.94□□□□□ -0.18
USP1-204ENST00000452143 CCDC85CA6NKD9 419 aa13.94□□□□□ -0.18
USP1-204ENST00000452143 H7C1W4 665 aa13.94□□□□□ -0.18
USP1-204ENST00000452143 IGHMBP2P38935 993 aaKnown RBP13.94□□□□□ -0.18
USP1-204ENST00000452143 RGS19P49795 217 aa13.94□□□□□ -0.18
USP1-204ENST00000452143 MMP14P50281 582 aa13.94□□□□□ -0.18
USP1-204ENST00000452143 CCT4P50991 539 aaKnown RBP13.94□□□□□ -0.18
USP1-204ENST00000452143 FAM161AQ3B820 660 aa13.94□□□□□ -0.18
USP1-204ENST00000452143 UBE3BQ7Z3V4 1068 aa13.94□□□□□ -0.18
USP1-204ENST00000452143 PLA2G12BQ9BX93 195 aa13.94□□□□□ -0.18
USP1-204ENST00000452143 COA1Q9GZY4 146 aa13.94□□□□□ -0.18
USP1-204ENST00000452143 LEMD3Q9Y2U8 911 aa13.94□□□□□ -0.18
USP1-204ENST00000452143 ECM29Q5VYK3 1845 aa13.94□□□□□ -0.18
USP1-204ENST00000452143 KIF23Q02241 960 aaPredicted RBP13.93□□□□□ -0.18
USP1-204ENST00000452143 FLIIQ13045 1269 aa13.93□□□□□ -0.18
USP1-204ENST00000452143 DACT2Q5SW24 774 aa13.93□□□□□ -0.18
USP1-204ENST00000452143 STRIP1Q5VSL9 837 aa13.93□□□□□ -0.18
USP1-204ENST00000452143 OGFOD1Q8N543 542 aa13.93□□□□□ -0.18
USP1-204ENST00000452143 MYH16Q9H6N6 1097 aa13.93□□□□□ -0.18
USP1-204ENST00000452143 MLLT1Q03111 559 aaPredicted RBP13.92□□□□□ -0.18
USP1-204ENST00000452143 DGKZQ13574 1117 aa13.92□□□□□ -0.18
USP1-204ENST00000452143 GCKRQ14397 625 aa13.92□□□□□ -0.18
USP1-204ENST00000452143 G2E3Q7L622 706 aa13.92□□□□□ -0.18
USP1-204ENST00000452143 RASAL3Q86YV0 1011 aa13.92□□□□□ -0.18
USP1-204ENST00000452143 LINS1Q8NG48 757 aa13.92□□□□□ -0.18
USP1-204ENST00000452143 ANKRD2Q9GZV1 360 aa13.92□□□□□ -0.18
USP1-204ENST00000452143 FANCIQ9NVI1 1328 aa13.91□□□□□ -0.18
USP1-204ENST00000452143 ITGA6P23229 1130 aa13.91□□□□□ -0.18
USP1-204ENST00000452143 FKBP5Q13451 457 aaPredicted RBP13.91□□□□□ -0.18
USP1-204ENST00000452143 DNAAF4Q8WXU2 420 aa13.91□□□□□ -0.18
USP1-204ENST00000452143 RNF186Q9NXI6 227 aa13.91□□□□□ -0.18
USP1-204ENST00000452143 COL1A1P02452 1464 aaPredicted RBP13.91□□□□□ -0.18
USP1-204ENST00000452143 TNRC18O15417 2968 aaPredicted RBP13.91□□□□□ -0.18
USP1-204ENST00000452143 PDE4DIPQ5VU43 2346 aa13.91□□□□□ -0.18
USP1-204ENST00000452143 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.18
USP1-204ENST00000452143 CSF1RP07333 972 aa13.9□□□□□ -0.18
USP1-204ENST00000452143 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.183e-7■■□□□ 12.2
USP1-204ENST00000452143 CASP7P55210 303 aa13.9□□□□□ -0.18
USP1-204ENST00000452143 CCDC184Q52MB2 194 aa13.9□□□□□ -0.18
USP1-204ENST00000452143 CSRNP1Q96S65 589 aa13.9□□□□□ -0.18
USP1-204ENST00000452143 MPHOSPH8Q99549 860 aa13.9□□□□□ -0.18
USP1-204ENST00000452143 LAMB1P07942 1786 aa13.9□□□□□ -0.18
USP1-204ENST00000452143 WTIPA6NIX2 430 aaPredicted RBP13.89□□□□□ -0.19
USP1-204ENST00000452143 WNT10BO00744 389 aa13.89□□□□□ -0.19
USP1-204ENST00000452143 TRPA1O75762 1119 aa13.89□□□□□ -0.19
USP1-204ENST00000452143 NF2P35240 595 aa13.89□□□□□ -0.19
USP1-204ENST00000452143 NBPF9Q3BBW0 867 aa13.89□□□□□ -0.19
USP1-204ENST00000452143 PITPNM1O00562 1244 aa13.88□□□□□ -0.19
USP1-204ENST00000452143 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
USP1-204ENST00000452143 APOBEC3FQ8IUX4 373 aaKnown RBP13.88□□□□□ -0.19
USP1-204ENST00000452143 WDR63Q8IWG1 891 aa13.88□□□□□ -0.19
USP1-204ENST00000452143 FBXW7Q969H0 707 aa13.88□□□□□ -0.19
USP1-204ENST00000452143 HDAC9Q9UKV0 1011 aa13.88□□□□□ -0.19
USP1-204ENST00000452143 ARAP2Q8WZ64 1704 aa13.87□□□□□ -0.19
USP1-204ENST00000452143 ANKRD18BA2A2Z9 1011 aa13.87□□□□□ -0.19
USP1-204ENST00000452143 KCNJ4P48050 445 aa13.87□□□□□ -0.19
USP1-204ENST00000452143 TTLL5Q6EMB2 1281 aa13.87□□□□□ -0.19
USP1-204ENST00000452143 MXD3Q9BW11 206 aa13.87□□□□□ -0.19
USP1-204ENST00000452143 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
USP1-204ENST00000452143 VAMP4O75379 141 aa13.86□□□□□ -0.19
USP1-204ENST00000452143 KLRK1P26718 216 aa13.86□□□□□ -0.19
USP1-204ENST00000452143 CHRNDQ07001 517 aa13.86□□□□□ -0.19
USP1-204ENST00000452143 C15orf52Q6ZUT6 534 aaKnown RBP13.86□□□□□ -0.19
USP1-204ENST00000452143 IRS2Q9Y4H2 1338 aa13.86□□□□□ -0.19
USP1-204ENST00000452143 SASH1O94885 1247 aa13.85□□□□□ -0.19
USP1-204ENST00000452143 GTF2IP78347 998 aa13.85□□□□□ -0.19
USP1-204ENST00000452143 IFIT5Q13325 482 aaKnown RBP13.85□□□□□ -0.19
USP1-204ENST00000452143 TTLL12Q14166 644 aaPredicted RBP13.85□□□□□ -0.19
USP1-204ENST00000452143 MOB2Q70IA6 237 aa13.85□□□□□ -0.19
USP1-204ENST00000452143 CTU1Q7Z7A3 348 aaKnown RBP13.85□□□□□ -0.19
USP1-204ENST00000452143 KIAA0825Q8IV33 1275 aa13.85□□□□□ -0.19
USP1-204ENST00000452143 ZBED3Q96IU2 234 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms