RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 ZC3H12CQ9C0D7 883 aaKnown RBP29.73■■■□□ 2.35
CPSF4-207ENST00000451876 SCN9AQ15858 1988 aa29.72■■■□□ 2.35
CPSF4-207ENST00000451876 ATP2B3Q16720 1220 aa29.72■■■□□ 2.35
CPSF4-207ENST00000451876 ERC1Q8IUD2 1116 aa29.71■■■□□ 2.35
CPSF4-207ENST00000451876 RHPN1Q8TCX5 695 aa29.71■■■□□ 2.35
CPSF4-207ENST00000451876 VPS33BQ9H267 617 aa29.71■■■□□ 2.35
CPSF4-207ENST00000451876 LPIN2Q92539 896 aa29.71■■■□□ 2.35
CPSF4-207ENST00000451876 A0A1B0GUL7 405 aa29.7■■■□□ 2.34
CPSF4-207ENST00000451876 TIMM10P62072 90 aa29.7■■■□□ 2.34
CPSF4-207ENST00000451876 DOK7Q18PE1 504 aa29.7■■■□□ 2.34
CPSF4-207ENST00000451876 C15orf52Q6ZUT6 534 aaKnown RBP29.7■■■□□ 2.34
CPSF4-207ENST00000451876 DBNDD1Q9H9R9 158 aa29.7■■■□□ 2.34
CPSF4-207ENST00000451876 IL1RAPL2Q9NP60 686 aa29.7■■■□□ 2.34
CPSF4-207ENST00000451876 KIF1BPQ96EK5 621 aa29.69■■■□□ 2.34
CPSF4-207ENST00000451876 RAB11FIP3O75154 756 aa29.68■■■□□ 2.34
CPSF4-207ENST00000451876 SLC5A1P13866 664 aa29.68■■■□□ 2.34
CPSF4-207ENST00000451876 TNNI3KQ59H18 835 aa29.68■■■□□ 2.34
CPSF4-207ENST00000451876 RWDD1Q9H446 243 aaPredicted RBP29.68■■■□□ 2.34
CPSF4-207ENST00000451876 AKAP2Q9Y2D5 859 aa29.68■■■□□ 2.34
CPSF4-207ENST00000451876 FPGT-TNNI3KV9GXZ4 949 aa29.68■■■□□ 2.34
CPSF4-207ENST00000451876 ZNF646O15015 1829 aaPredicted RBP29.68■■■□□ 2.34
CPSF4-207ENST00000451876 PSME4Q14997 1843 aa29.68■■■□□ 2.34
CPSF4-207ENST00000451876 IFIT1P09914 478 aaKnown RBP29.67■■■□□ 2.34
CPSF4-207ENST00000451876 GYG1P46976 350 aa29.67■■■□□ 2.34
CPSF4-207ENST00000451876 MYH13Q9UKX3 1938 aa29.67■■■□□ 2.34
CPSF4-207ENST00000451876 ADORA1P30542 326 aa29.67■■■□□ 2.34
CPSF4-207ENST00000451876 NIM1KQ8IY84 436 aa29.67■■■□□ 2.34
CPSF4-207ENST00000451876 JDP2Q8WYK2 163 aa29.67■■■□□ 2.34
CPSF4-207ENST00000451876 ECE2O60344 883 aa29.66■■■□□ 2.34
CPSF4-207ENST00000451876 EAF2Q96CJ1 260 aaPredicted RBP29.66■■■□□ 2.34
CPSF4-207ENST00000451876 FAM84BQ96KN1 310 aaPredicted RBP29.66■■■□□ 2.34
CPSF4-207ENST00000451876 GPR108Q9NPR9 543 aa29.66■■■□□ 2.34
CPSF4-207ENST00000451876 YDJCA8MPS7 323 aa29.65■■■□□ 2.34
CPSF4-207ENST00000451876 SMARCA5O60264 1052 aaPredicted RBP29.65■■■□□ 2.34
CPSF4-207ENST00000451876 NEUROD6Q96NK8 337 aa29.65■■■□□ 2.34
CPSF4-207ENST00000451876 LRRCC1Q9C099 1032 aa29.65■■■□□ 2.34
CPSF4-207ENST00000451876 BCL11AQ9H165 835 aa29.65■■■□□ 2.34
CPSF4-207ENST00000451876 GCC1Q96CN9 775 aa29.63■■■□□ 2.33
CPSF4-207ENST00000451876 XAGE2Q96GT9 111 aa29.63■■■□□ 2.33
CPSF4-207ENST00000451876 TLR7Q9NYK1 1049 aaKnown RBP29.63■■■□□ 2.33
CPSF4-207ENST00000451876 FZD9O00144 591 aa29.63■■■□□ 2.33
CPSF4-207ENST00000451876 BCAMP50895 628 aa29.63■■■□□ 2.33
CPSF4-207ENST00000451876 SMC5Q8IY18 1101 aa29.63■■■□□ 2.33
CPSF4-207ENST00000451876 COA1Q9GZY4 146 aa29.63■■■□□ 2.33
CPSF4-207ENST00000451876 CD209Q9NNX6 404 aa29.63■■■□□ 2.33
CPSF4-207ENST00000451876 G3V3G9 751 aa29.62■■■□□ 2.33
CPSF4-207ENST00000451876 HIBADHP31937 336 aaKnown RBP29.62■■■□□ 2.33
CPSF4-207ENST00000451876 DCAF8Q5TAQ9 597 aa29.62■■■□□ 2.33
CPSF4-207ENST00000451876 ZNF804AQ7Z570 1209 aa29.62■■■□□ 2.33
CPSF4-207ENST00000451876 FBXO33Q7Z6M2 555 aa29.62■■■□□ 2.33
CPSF4-207ENST00000451876 KCNQ5Q9NR82 932 aa29.62■■■□□ 2.33
CPSF4-207ENST00000451876 ZNRF3Q9ULT6 936 aa29.62■■■□□ 2.33
CPSF4-207ENST00000451876 CAVIN4Q5BKX8 364 aa29.61■■■□□ 2.33
CPSF4-207ENST00000451876 AACSQ86V21 672 aa29.61■■■□□ 2.33
CPSF4-207ENST00000451876 DBNDD2Q9BQY9 259 aa29.61■■■□□ 2.33
CPSF4-207ENST00000451876 ZNF541Q9H0D2 1346 aa29.61■■■□□ 2.33
CPSF4-207ENST00000451876 CCDC8Q9H0W5 538 aaPredicted RBP29.61■■■□□ 2.33
CPSF4-207ENST00000451876 DBNLQ9UJU6 430 aaKnown RBP29.61■■■□□ 2.33
CPSF4-207ENST00000451876 CLASRPQ8N2M8 674 aaKnown RBP29.6■■■□□ 2.33
CPSF4-207ENST00000451876 ZC3H4Q9UPT8 1303 aaKnown RBP29.59■■■□□ 2.33
CPSF4-207ENST00000451876 IL1R1P14778 569 aa29.59■■■□□ 2.33
CPSF4-207ENST00000451876 PHKA1P46020 1223 aa29.59■■■□□ 2.33
CPSF4-207ENST00000451876 PODNQ7Z5L7 613 aa29.59■■■□□ 2.33
CPSF4-207ENST00000451876 VPS37DQ86XT2 251 aa29.59■■■□□ 2.33
CPSF4-207ENST00000451876 IQSEC3Q9UPP2 1182 aaPredicted RBP29.59■■■□□ 2.33
CPSF4-207ENST00000451876 CCDC102BQ68D86 513 aa29.58■■■□□ 2.33
CPSF4-207ENST00000451876 RAD17O75943 681 aa29.57■■■□□ 2.32
CPSF4-207ENST00000451876 CXCL9Q07325 125 aa29.57■■■□□ 2.32
CPSF4-207ENST00000451876 B4GALNT3Q6L9W6 998 aa29.57■■■□□ 2.32
CPSF4-207ENST00000451876 COL1A1P02452 1464 aaPredicted RBP29.57■■■□□ 2.32
CPSF4-207ENST00000451876 ANKRD45Q5TZF3 282 aa29.56■■■□□ 2.32
CPSF4-207ENST00000451876 TDRD7Q8NHU6 1098 aaKnown RBP29.56■■■□□ 2.32
CPSF4-207ENST00000451876 AKAP11Q9UKA4 1901 aa29.55■■■□□ 2.32
CPSF4-207ENST00000451876 EIF6P56537 245 aaKnown RBP29.55■■■□□ 2.32
CPSF4-207ENST00000451876 GORABQ5T7V8 394 aa29.54■■■□□ 2.32
CPSF4-207ENST00000451876 ERICH6BQ5W0A0 696 aa29.54■■■□□ 2.32
CPSF4-207ENST00000451876 JAG2Q9Y219 1238 aa29.54■■■□□ 2.32
CPSF4-207ENST00000451876 KDM2BQ8NHM5 1336 aa29.54■■■□□ 2.32
CPSF4-207ENST00000451876 IFIT2P09913 472 aaKnown RBP29.53■■■□□ 2.32
CPSF4-207ENST00000451876 PSMD14O00487 310 aa29.53■■■□□ 2.32
CPSF4-207ENST00000451876 CIAPIN1Q6FI81 312 aa29.53■■■□□ 2.32
CPSF4-207ENST00000451876 GTF2IP78347 998 aa29.52■■■□□ 2.32
CPSF4-207ENST00000451876 C16orf71Q8IYS4 520 aaPredicted RBP29.52■■■□□ 2.32
CPSF4-207ENST00000451876 CCDC136Q96JN2 1154 aa29.52■■■□□ 2.32
CPSF4-207ENST00000451876 DDNO94850 711 aaPredicted RBP29.51■■■□□ 2.31
CPSF4-207ENST00000451876 FBXW7Q969H0 707 aa29.51■■■□□ 2.31
CPSF4-207ENST00000451876 USP17L3A6NCW0 530 aa29.5■■■□□ 2.31
CPSF4-207ENST00000451876 USP17L4A6NCW7 530 aa29.5■■■□□ 2.31
CPSF4-207ENST00000451876 FRAT2O75474 233 aaPredicted RBP29.5■■■□□ 2.31
CPSF4-207ENST00000451876 ARID4AP29374 1257 aaPredicted RBP29.5■■■□□ 2.31
CPSF4-207ENST00000451876 NUCB1Q02818 461 aa29.5■■■□□ 2.31
CPSF4-207ENST00000451876 RASGRF1Q13972 1273 aa29.5■■■□□ 2.31
CPSF4-207ENST00000451876 SCARF1Q14162 830 aa29.5■■■□□ 2.31
CPSF4-207ENST00000451876 TTLL5Q6EMB2 1281 aa29.5■■■□□ 2.31
CPSF4-207ENST00000451876 USP17L1Q7RTZ2 530 aa29.5■■■□□ 2.31
CPSF4-207ENST00000451876 OTUD7AQ8TE49 926 aaPredicted RBP29.5■■■□□ 2.31
CPSF4-207ENST00000451876 LNPKQ9C0E8 428 aa29.5■■■□□ 2.31
CPSF4-207ENST00000451876 GJA3Q9Y6H8 435 aa29.5■■■□□ 2.31
CPSF4-207ENST00000451876 CCDC158Q5M9N0 1113 aa29.49■■■□□ 2.31
CPSF4-207ENST00000451876 MXD3Q9BW11 206 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms