RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 AFF2P51816 1311 aa18.21■□□□□ 0.51
CCHCR1-208ENST00000451521 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 LARGE1O95461 756 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 ADORA1P30542 326 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 KRT32Q14532 448 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 CCDC129Q6ZRS4 1044 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 TAF6LQ9Y6J9 622 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 DYNC1I1O14576 645 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 RPS6KB1P23443 525 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 BLOC1S2Q6QNY1 142 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 LDHAL6AQ6ZMR3 332 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 VGLL2Q8N8G2 317 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 LARP6Q9BRS8 491 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 BCORQ6W2J9 1755 aa18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 RNF113AO15541 343 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 CSPP1Q1MSJ5 1256 aa18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 TTC39AQ5SRH9 613 aa18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 DSCC1Q9BVC3 393 aa18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 WDR33Q9C0J8 1336 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 DDX60Q8IY21 1712 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 LAMB2P55268 1798 aa18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 MCM5P33992 734 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 ANKRD1Q15327 319 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 METTL24Q5JXM2 366 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 SUSD4Q5VX71 490 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 MTERF4Q7Z6M4 381 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 RBM27Q9P2N5 1060 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 COL9A3Q14050 684 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 ATP2B3Q16720 1220 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 PARP10Q53GL7 1025 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 GPT2Q8TD30 523 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 ZNF512BQ96KM6 892 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 AKAP11Q9UKA4 1901 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 ME3Q16798 604 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 GORABQ5T7V8 394 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 TPCN1Q9ULQ1 816 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 ARAP2Q8WZ64 1704 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 ST3GAL1Q11201 340 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 MYH7P12883 1935 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 SPATA31A6Q5VVP1 1343 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 PRPF40AO75400 957 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 LRRFIP1Q32MZ4 808 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 UTP14AQ9BVJ6 771 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 CNNM1Q9NRU3 951 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 SMC3Q9UQE7 1217 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 MAST3O60307 1309 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 CYP21A2P08686 494 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 CCDC83Q8IWF9 413 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 LAMA4Q16363 1823 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 PDE8BO95263 885 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 ZFYP08048 801 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 TOB2Q14106 344 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 SCARF1Q14162 830 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 SLFNL1Q499Z3 407 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 SASS6Q6UVJ0 657 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 BBXQ8WY36 941 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 NEK1Q96PY6 1258 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 FKBP4Q02790 459 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 FOXD4L5Q5VV16 416 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 FOXD4L4Q8WXT5 416 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 LRSAM1Q6UWE0 723 aa18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 GJD4Q96KN9 370 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 CCDC39Q9UFE4 941 aa18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 RTL9Q8NET4 1388 aa18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 HSPD1P10809 573 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 SYT1P21579 422 aa18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 CHAMP1Q96JM3 812 aa18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 BCL11BQ9C0K0 894 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 MROH5Q6ZUA9 1318 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 THSD7AQ9UPZ6 1657 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 STX6O43752 255 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 NTSR2O95665 410 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 ZAP70P43403 619 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 TMEM63CQ9P1W3 806 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 ZSCAN22P10073 491 aaPredicted RBP18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 GJB2P29033 226 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 OSBP2Q969R2 916 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 SYCE3A1L190 88 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 M0R2C6 588 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 HSP90B1P14625 803 aaKnown RBP18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 FGFR2P21802 821 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 CLEC4GQ6UXB4 293 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 HCLS1P14317 486 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 MCAMP43121 646 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 LINC00116Q8NCU8 138 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 RGL2O15211 777 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 HMGB1P09429 215 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 NECAB1Q8N987 351 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 TCEANC2Q96MN5 208 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 NIP7Q9Y221 180 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 PDIA4P13667 645 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 ARID4AP29374 1257 aaPredicted RBP18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 PUM3Q15397 648 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 STOX1Q6ZVD7 989 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 ZNF652Q9Y2D9 606 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 CNTNAP4Q9C0A0 1308 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 AMIGO3Q86WK7 504 aa18.1■□□□□ 0.49
CCHCR1-208ENST00000451521 LPIN2Q92539 896 aa18.1■□□□□ 0.49
CCHCR1-208ENST00000451521 APPBP2Q92624 585 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms