RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 AFF2P51816 1311 aa18.21■□□□□ 0.51
CCHCR1-208ENST00000451521 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 LARGE1O95461 756 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 ADORA1P30542 326 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 KRT32Q14532 448 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 CCDC129Q6ZRS4 1044 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 TAF6LQ9Y6J9 622 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 DYNC1I1O14576 645 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 RPS6KB1P23443 525 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 BLOC1S2Q6QNY1 142 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 LDHAL6AQ6ZMR3 332 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 VGLL2Q8N8G2 317 aa18.2■□□□□ 0.5
CCHCR1-208ENST00000451521 LARP6Q9BRS8 491 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 BCORQ6W2J9 1755 aa18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 RNF113AO15541 343 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 CSPP1Q1MSJ5 1256 aa18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 TTC39AQ5SRH9 613 aa18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 DSCC1Q9BVC3 393 aa18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 WDR33Q9C0J8 1336 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 DDX60Q8IY21 1712 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 LAMB2P55268 1798 aa18.19■□□□□ 0.5
CCHCR1-208ENST00000451521 MCM5P33992 734 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 ANKRD1Q15327 319 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 METTL24Q5JXM2 366 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 SUSD4Q5VX71 490 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 MTERF4Q7Z6M4 381 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 RBM27Q9P2N5 1060 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 COL9A3Q14050 684 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 ATP2B3Q16720 1220 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 PARP10Q53GL7 1025 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 GPT2Q8TD30 523 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 ZNF512BQ96KM6 892 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 AKAP11Q9UKA4 1901 aa18.18■□□□□ 0.5
CCHCR1-208ENST00000451521 ME3Q16798 604 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 GORABQ5T7V8 394 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 TPCN1Q9ULQ1 816 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 ARAP2Q8WZ64 1704 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 ST3GAL1Q11201 340 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 MYH7P12883 1935 aa18.17■□□□□ 0.5
CCHCR1-208ENST00000451521 SPATA31A6Q5VVP1 1343 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 PRPF40AO75400 957 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 LRRFIP1Q32MZ4 808 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 UTP14AQ9BVJ6 771 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 CNNM1Q9NRU3 951 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 SMC3Q9UQE7 1217 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 MAST3O60307 1309 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 CYP21A2P08686 494 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 CCDC83Q8IWF9 413 aa18.16■□□□□ 0.5
CCHCR1-208ENST00000451521 LAMA4Q16363 1823 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 PDE8BO95263 885 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 ZFYP08048 801 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 TOB2Q14106 344 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 SCARF1Q14162 830 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 SLFNL1Q499Z3 407 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 SASS6Q6UVJ0 657 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 BBXQ8WY36 941 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 NEK1Q96PY6 1258 aa18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 FKBP4Q02790 459 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 FOXD4L5Q5VV16 416 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 FOXD4L4Q8WXT5 416 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-208ENST00000451521 LRSAM1Q6UWE0 723 aa18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 GJD4Q96KN9 370 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 CCDC39Q9UFE4 941 aa18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 RTL9Q8NET4 1388 aa18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 HSPD1P10809 573 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 SYT1P21579 422 aa18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 CHAMP1Q96JM3 812 aa18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 BCL11BQ9C0K0 894 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-208ENST00000451521 MROH5Q6ZUA9 1318 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 THSD7AQ9UPZ6 1657 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 STX6O43752 255 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 NTSR2O95665 410 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 ZAP70P43403 619 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 TMEM63CQ9P1W3 806 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 ZSCAN22P10073 491 aaPredicted RBP18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 GJB2P29033 226 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 OSBP2Q969R2 916 aa18.13■□□□□ 0.49
CCHCR1-208ENST00000451521 SYCE3A1L190 88 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 M0R2C6 588 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 HSP90B1P14625 803 aaKnown RBP18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 FGFR2P21802 821 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 CLEC4GQ6UXB4 293 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 HCLS1P14317 486 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 MCAMP43121 646 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 LINC00116Q8NCU8 138 aa18.12■□□□□ 0.49
CCHCR1-208ENST00000451521 RGL2O15211 777 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 HMGB1P09429 215 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 NECAB1Q8N987 351 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 TCEANC2Q96MN5 208 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 NIP7Q9Y221 180 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 PDIA4P13667 645 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 ARID4AP29374 1257 aaPredicted RBP18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 PUM3Q15397 648 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 STOX1Q6ZVD7 989 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 ZNF652Q9Y2D9 606 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 CNTNAP4Q9C0A0 1308 aa18.11■□□□□ 0.49
CCHCR1-208ENST00000451521 AMIGO3Q86WK7 504 aa18.1■□□□□ 0.49
CCHCR1-208ENST00000451521 LPIN2Q92539 896 aa18.1■□□□□ 0.49
CCHCR1-208ENST00000451521 APPBP2Q92624 585 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms