RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 HSPA1AP0DMV8 641 aaKnown RBP12.21□□□□□ -0.45
USP54-207ENST00000451492 HSPA1BP0DMV9 641 aaKnown RBP12.21□□□□□ -0.45
USP54-207ENST00000451492 RPS12P25398 132 aaKnown RBP12.21□□□□□ -0.45
USP54-207ENST00000451492 HNRNPUQ00839 825 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP54-207ENST00000451492 ALDH1L2Q3SY69 923 aa12.21□□□□□ -0.45
USP54-207ENST00000451492 RSBN1LQ6PCB5 846 aaPredicted RBP12.21□□□□□ -0.45
USP54-207ENST00000451492 JMYQ8N9B5 988 aa12.21□□□□□ -0.45
USP54-207ENST00000451492 DPF2Q92785 391 aa12.21□□□□□ -0.45
USP54-207ENST00000451492 BICC1Q9H694 974 aaKnown RBP12.21□□□□□ -0.45
USP54-207ENST00000451492 LEMD3Q9Y2U8 911 aa12.21□□□□□ -0.45
USP54-207ENST00000451492 ASTN2O75129 1339 aaPredicted RBP12.2□□□□□ -0.46
USP54-207ENST00000451492 USP17L3A6NCW0 530 aa12.2□□□□□ -0.46
USP54-207ENST00000451492 USP17L4A6NCW7 530 aa12.2□□□□□ -0.46
USP54-207ENST00000451492 CELF2O95319 508 aaKnown RBP12.2□□□□□ -0.46
USP54-207ENST00000451492 VEGFBP49765 207 aa12.2□□□□□ -0.46
USP54-207ENST00000451492 LDHAL6AQ6ZMR3 332 aa12.2□□□□□ -0.46
USP54-207ENST00000451492 USP17L1Q7RTZ2 530 aa12.2□□□□□ -0.46
USP54-207ENST00000451492 USP48Q86UV5 1035 aa12.2□□□□□ -0.46
USP54-207ENST00000451492 TRMT2AQ8IZ69 625 aaKnown RBP12.2□□□□□ -0.46
USP54-207ENST00000451492 KAZALD1Q96I82 304 aa12.2□□□□□ -0.46
USP54-207ENST00000451492 GGA3Q9NZ52 723 aa12.2□□□□□ -0.46
USP54-207ENST00000451492 NOB1Q9ULX3 412 aaKnown RBP12.2□□□□□ -0.46
USP54-207ENST00000451492 THSD7BQ9C0I4 1608 aa12.19□□□□□ -0.46
USP54-207ENST00000451492 ADM5C9JUS6 153 aa12.19□□□□□ -0.46
USP54-207ENST00000451492 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
USP54-207ENST00000451492 PODNQ7Z5L7 613 aa12.19□□□□□ -0.46
USP54-207ENST00000451492 PUS3Q9BZE2 481 aaKnown RBP12.19□□□□□ -0.46
USP54-207ENST00000451492 SCAF8Q9UPN6 1271 aaKnown RBP12.19□□□□□ -0.46
USP54-207ENST00000451492 JAG2Q9Y219 1238 aa12.19□□□□□ -0.46
USP54-207ENST00000451492 GTF2IP78347 998 aa12.18□□□□□ -0.46
USP54-207ENST00000451492 CST9Q5W186 159 aa12.18□□□□□ -0.46
USP54-207ENST00000451492 CYP4F22Q6NT55 531 aa12.18□□□□□ -0.46
USP54-207ENST00000451492 CDC37L1Q7L3B6 337 aa12.18□□□□□ -0.46
USP54-207ENST00000451492 AGBL3Q8NEM8 1001 aa12.18□□□□□ -0.46
USP54-207ENST00000451492 KLHDC4Q8TBB5 520 aa12.18□□□□□ -0.46
USP54-207ENST00000451492 DCPSQ96C86 337 aaKnown RBP12.18□□□□□ -0.46
USP54-207ENST00000451492 COA1Q9GZY4 146 aa12.18□□□□□ -0.46
USP54-207ENST00000451492 UTYO14607 1347 aa12.17□□□□□ -0.46
USP54-207ENST00000451492 USP17L8P0C7I0 530 aa12.17□□□□□ -0.46
USP54-207ENST00000451492 DACT2Q5SW24 774 aa12.17□□□□□ -0.46
USP54-207ENST00000451492 ANGEL2Q5VTE6 544 aaKnown RBP12.17□□□□□ -0.46
USP54-207ENST00000451492 KRT26Q7Z3Y9 468 aa12.17□□□□□ -0.46
USP54-207ENST00000451492 ANKRD44Q8N8A2 993 aa12.17□□□□□ -0.46
USP54-207ENST00000451492 ZC3H15Q8WU90 426 aaKnown RBP12.17□□□□□ -0.46
USP54-207ENST00000451492 MYOZ2Q9NPC6 264 aa12.17□□□□□ -0.46
USP54-207ENST00000451492 ZNF609O15014 1411 aa12.17□□□□□ -0.46
USP54-207ENST00000451492 WDR33Q9C0J8 1336 aaKnown RBP12.16□□□□□ -0.46
USP54-207ENST00000451492 RASSF10A6NK89 507 aa12.16□□□□□ -0.46
USP54-207ENST00000451492 F8W031 263 aaPredicted RBP12.16□□□□□ -0.46
USP54-207ENST00000451492 SASH1O94885 1247 aa12.16□□□□□ -0.46
USP54-207ENST00000451492 RARSP54136 660 aaKnown RBP12.16□□□□□ -0.46
USP54-207ENST00000451492 SCARF1Q14162 830 aa12.16□□□□□ -0.46
USP54-207ENST00000451492 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
USP54-207ENST00000451492 TTLL5Q6EMB2 1281 aa12.16□□□□□ -0.46
USP54-207ENST00000451492 ZNF804AQ7Z570 1209 aa12.16□□□□□ -0.46
USP54-207ENST00000451492 KIAA0825Q8IV33 1275 aa12.16□□□□□ -0.46
USP54-207ENST00000451492 FRAT1Q92837 279 aaPredicted RBP12.16□□□□□ -0.46
USP54-207ENST00000451492 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
USP54-207ENST00000451492 CD209Q9NNX6 404 aa12.16□□□□□ -0.46
USP54-207ENST00000451492 PGAP2Q9UHJ9 254 aa12.16□□□□□ -0.46
USP54-207ENST00000451492 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
USP54-207ENST00000451492 IRS2Q9Y4H2 1338 aa12.15□□□□□ -0.46
USP54-207ENST00000451492 CT47B1P0C2W7 299 aaPredicted RBP12.15□□□□□ -0.46
USP54-207ENST00000451492 ZNF280AP59817 542 aaPredicted RBP12.15□□□□□ -0.46
USP54-207ENST00000451492 METTL24Q5JXM2 366 aa12.15□□□□□ -0.46
USP54-207ENST00000451492 STRIP1Q5VSL9 837 aa12.15□□□□□ -0.46
USP54-207ENST00000451492 SULF1Q8IWU6 871 aa12.15□□□□□ -0.46
USP54-207ENST00000451492 CAPNS2Q96L46 248 aa12.15□□□□□ -0.46
USP54-207ENST00000451492 GMLQ99445 158 aa12.15□□□□□ -0.46
USP54-207ENST00000451492 API5Q9BZZ5 524 aaKnown RBP12.15□□□□□ -0.46
USP54-207ENST00000451492 TNNQ9UQP3 1299 aa12.15□□□□□ -0.46
USP54-207ENST00000451492 TLL2Q9Y6L7 1015 aa12.15□□□□□ -0.46
USP54-207ENST00000451492 MYO3BQ8WXR4 1341 aa12.14□□□□□ -0.47
USP54-207ENST00000451492 AOC2O75106 756 aa12.14□□□□□ -0.47
USP54-207ENST00000451492 BCAR3O75815 825 aa12.14□□□□□ -0.47
USP54-207ENST00000451492 UBTFL1P0CB47 393 aaPredicted RBP12.14□□□□□ -0.47
USP54-207ENST00000451492 GYG1P46976 350 aa12.14□□□□□ -0.47
USP54-207ENST00000451492 NBPF9Q3BBW0 867 aa12.14□□□□□ -0.47
USP54-207ENST00000451492 RABL6Q3YEC7 729 aaPredicted RBP12.14□□□□□ -0.47
USP54-207ENST00000451492 OGFOD1Q8N543 542 aa12.14□□□□□ -0.47
USP54-207ENST00000451492 SIL1Q9H173 461 aa12.14□□□□□ -0.47
USP54-207ENST00000451492 IQSEC3Q9UPP2 1182 aaPredicted RBP12.14□□□□□ -0.47
USP54-207ENST00000451492 PAPPA2Q9BXP8 1791 aa12.13□□□□□ -0.47
USP54-207ENST00000451492 FOXN1O15353 648 aa12.13□□□□□ -0.47
USP54-207ENST00000451492 HUNKP57058 714 aa12.13□□□□□ -0.47
USP54-207ENST00000451492 COL13A1Q5TAT6 717 aaPredicted RBP12.13□□□□□ -0.47
USP54-207ENST00000451492 SAPCD2Q86UD0 394 aa12.13□□□□□ -0.47
USP54-207ENST00000451492 CLUAP1Q96AJ1 413 aa12.13□□□□□ -0.47
USP54-207ENST00000451492 AIDAQ96BJ3 306 aa12.13□□□□□ -0.47
USP54-207ENST00000451492 CDCA5Q96FF9 252 aa12.13□□□□□ -0.47
USP54-207ENST00000451492 HDAC9Q9UKV0 1011 aa12.13□□□□□ -0.47
USP54-207ENST00000451492 MROH5Q6ZUA9 1318 aa12.12□□□□□ -0.47
USP54-207ENST00000451492 ECE1P42892 770 aa12.12□□□□□ -0.47
USP54-207ENST00000451492 CHAF1AQ13111 956 aaPredicted RBP12.12□□□□□ -0.47
USP54-207ENST00000451492 PRAMEF18Q5VWM3 479 aa12.12□□□□□ -0.47
USP54-207ENST00000451492 VPS37DQ86XT2 251 aa12.12□□□□□ -0.47
USP54-207ENST00000451492 CERS5Q8N5B7 392 aa12.12□□□□□ -0.47
USP54-207ENST00000451492 MEIS3Q99687 375 aa12.12□□□□□ -0.47
USP54-207ENST00000451492 GBA2Q9HCG7 927 aaPredicted RBP12.12□□□□□ -0.47
USP54-207ENST00000451492 RIPOR2Q9Y4F9 1068 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms