RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 USP17L3A6NCW0 530 aa12.66□□□□□ -0.38
LINC01238-204ENST00000451070 USP17L4A6NCW7 530 aa12.66□□□□□ -0.38
LINC01238-204ENST00000451070 FAM155AB1AL88 458 aaPredicted RBP12.66□□□□□ -0.38
LINC01238-204ENST00000451070 CCT4P50991 539 aaKnown RBP12.66□□□□□ -0.38
LINC01238-204ENST00000451070 USP17L1Q7RTZ2 530 aa12.66□□□□□ -0.38
LINC01238-204ENST00000451070 TXNRD3Q86VQ6 643 aa12.66□□□□□ -0.38
LINC01238-204ENST00000451070 WDR63Q8IWG1 891 aa12.66□□□□□ -0.38
LINC01238-204ENST00000451070 DNAAF4Q8WXU2 420 aa12.66□□□□□ -0.38
LINC01238-204ENST00000451070 SALL2Q9Y467 1007 aaPredicted RBP12.66□□□□□ -0.38
LINC01238-204ENST00000451070 CSF1RP07333 972 aa12.65□□□□□ -0.38
LINC01238-204ENST00000451070 PRKCSHP14314 528 aaPredicted RBP12.65□□□□□ -0.38
LINC01238-204ENST00000451070 ITGA6P23229 1130 aa12.65□□□□□ -0.38
LINC01238-204ENST00000451070 EXOSC9Q06265 439 aaKnown RBP12.65□□□□□ -0.38
LINC01238-204ENST00000451070 NOGQ13253 232 aa12.65□□□□□ -0.38
LINC01238-204ENST00000451070 FKBP5Q13451 457 aaPredicted RBP12.65□□□□□ -0.38
LINC01238-204ENST00000451070 SCARF1Q14162 830 aa12.65□□□□□ -0.38
LINC01238-204ENST00000451070 FAM161AQ3B820 660 aa12.65□□□□□ -0.38
LINC01238-204ENST00000451070 ANGEL2Q5VTE6 544 aaKnown RBP12.65□□□□□ -0.38
LINC01238-204ENST00000451070 RGMBQ6NW40 437 aa12.65□□□□□ -0.38
LINC01238-204ENST00000451070 SULF1Q8IWU6 871 aa12.65□□□□□ -0.38
LINC01238-204ENST00000451070 C2orf69Q8N8R5 385 aa12.65□□□□□ -0.38
LINC01238-204ENST00000451070 ABHD8Q96I13 439 aa12.65□□□□□ -0.38
LINC01238-204ENST00000451070 SPINK5Q9NQ38 1064 aaPredicted RBP12.65□□□□□ -0.38
LINC01238-204ENST00000451070 A0A1B0GUL6 1792 aa12.65□□□□□ -0.38
LINC01238-204ENST00000451070 ANP32CO43423 234 aa12.64□□□□□ -0.39
LINC01238-204ENST00000451070 CA12O43570 354 aa12.64□□□□□ -0.39
LINC01238-204ENST00000451070 USP17L8P0C7I0 530 aa12.64□□□□□ -0.39
LINC01238-204ENST00000451070 DACT2Q5SW24 774 aa12.64□□□□□ -0.39
LINC01238-204ENST00000451070 LINS1Q8NG48 757 aa12.64□□□□□ -0.39
LINC01238-204ENST00000451070 CDCA5Q96FF9 252 aa12.64□□□□□ -0.39
LINC01238-204ENST00000451070 MXD3Q9BW11 206 aa12.64□□□□□ -0.39
LINC01238-204ENST00000451070 MYH16Q9H6N6 1097 aa12.64□□□□□ -0.39
LINC01238-204ENST00000451070 MYOZ2Q9NPC6 264 aa12.64□□□□□ -0.39
LINC01238-204ENST00000451070 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
LINC01238-204ENST00000451070 F6X3S4 739 aa12.63□□□□□ -0.39
LINC01238-204ENST00000451070 KLRK1P26718 216 aa12.63□□□□□ -0.39
LINC01238-204ENST00000451070 IGHMBP2P38935 993 aaKnown RBP12.63□□□□□ -0.39
LINC01238-204ENST00000451070 LEMD3Q9Y2U8 911 aa12.63□□□□□ -0.39
LINC01238-204ENST00000451070 ZNF804BA4D1E1 1349 aa12.62□□□□□ -0.39
LINC01238-204ENST00000451070 PITPNM2Q9BZ72 1349 aa12.62□□□□□ -0.39
LINC01238-204ENST00000451070 AKAP11Q9UKA4 1901 aa12.62□□□□□ -0.39
LINC01238-204ENST00000451070 PAPPA2Q9BXP8 1791 aa12.62□□□□□ -0.39
LINC01238-204ENST00000451070 ZEB1P37275 1124 aaPredicted RBP12.62□□□□□ -0.39
LINC01238-204ENST00000451070 NBPF9Q3BBW0 867 aa12.62□□□□□ -0.39
LINC01238-204ENST00000451070 BEND3Q5T5X7 828 aa12.62□□□□□ -0.39
LINC01238-204ENST00000451070 COA1Q9GZY4 146 aa12.62□□□□□ -0.39
LINC01238-204ENST00000451070 SCAF8Q9UPN6 1271 aaKnown RBP12.62□□□□□ -0.39
LINC01238-204ENST00000451070 SLC10A3P09131 477 aa12.61□□□□□ -0.39
LINC01238-204ENST00000451070 HOXD11P31277 338 aaPredicted RBP12.61□□□□□ -0.39
LINC01238-204ENST00000451070 ZNF157P51786 506 aaPredicted RBP12.61□□□□□ -0.39
LINC01238-204ENST00000451070 FOXO4P98177 505 aa12.61□□□□□ -0.39
LINC01238-204ENST00000451070 KIF23Q02241 960 aaPredicted RBP12.61□□□□□ -0.39
LINC01238-204ENST00000451070 CHRNDQ07001 517 aa12.61□□□□□ -0.39
LINC01238-204ENST00000451070 STRIP1Q5VSL9 837 aa12.61□□□□□ -0.39
LINC01238-204ENST00000451070 CCDC102AQ96A19 550 aa12.61□□□□□ -0.39
LINC01238-204ENST00000451070 MPHOSPH8Q99549 860 aa12.61□□□□□ -0.39
LINC01238-204ENST00000451070 ANKRD2Q9GZV1 360 aa12.61□□□□□ -0.39
LINC01238-204ENST00000451070 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
LINC01238-204ENST00000451070 SNAP23O00161 211 aa12.6□□□□□ -0.39
LINC01238-204ENST00000451070 WNT10BO00744 389 aa12.6□□□□□ -0.39
LINC01238-204ENST00000451070 MYO3BQ8WXR4 1341 aa12.6□□□□□ -0.39
LINC01238-204ENST00000451070 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
LINC01238-204ENST00000451070 FKBP1BP68106 108 aa12.59□□□□□ -0.39
LINC01238-204ENST00000451070 EPHA10Q5JZY3 1008 aa12.59□□□□□ -0.39
LINC01238-204ENST00000451070 PRAMEF18Q5VWM3 479 aa12.59□□□□□ -0.39
LINC01238-204ENST00000451070 TTLL5Q6EMB2 1281 aa12.59□□□□□ -0.39
LINC01238-204ENST00000451070 MOB2Q70IA6 237 aa12.59□□□□□ -0.39
LINC01238-204ENST00000451070 RASAL3Q86YV0 1011 aa12.59□□□□□ -0.39
LINC01238-204ENST00000451070 FBXW7Q969H0 707 aa12.59□□□□□ -0.39
LINC01238-204ENST00000451070 MCOLN1Q9GZU1 580 aa12.59□□□□□ -0.39
LINC01238-204ENST00000451070 TAF5LO75529 589 aa12.58□□□□□ -0.4
LINC01238-204ENST00000451070 SASH1O94885 1247 aa12.58□□□□□ -0.4
LINC01238-204ENST00000451070 GTF2IP78347 998 aa12.58□□□□□ -0.4
LINC01238-204ENST00000451070 C15orf52Q6ZUT6 534 aaKnown RBP12.58□□□□□ -0.4
LINC01238-204ENST00000451070 FAM9BQ8IZU0 186 aa12.58□□□□□ -0.4
LINC01238-204ENST00000451070 OGFOD1Q8N543 542 aa12.58□□□□□ -0.4
LINC01238-204ENST00000451070 HELBQ8NG08 1087 aaPredicted RBP12.58□□□□□ -0.4
LINC01238-204ENST00000451070 ZBED3Q96IU2 234 aaPredicted RBP12.58□□□□□ -0.4
LINC01238-204ENST00000451070 CSRNP1Q96S65 589 aa12.58□□□□□ -0.4
LINC01238-204ENST00000451070 CD209Q9NNX6 404 aa12.58□□□□□ -0.4
LINC01238-204ENST00000451070 RNF186Q9NXI6 227 aa12.58□□□□□ -0.4
LINC01238-204ENST00000451070 SAGE1Q9NXZ1 904 aa12.58□□□□□ -0.4
LINC01238-204ENST00000451070 GRM8O00222 908 aa12.57□□□□□ -0.4
LINC01238-204ENST00000451070 TRPA1O75762 1119 aa12.57□□□□□ -0.4
LINC01238-204ENST00000451070 KCNJ4P48050 445 aa12.57□□□□□ -0.4
LINC01238-204ENST00000451070 MMP14P50281 582 aa12.57□□□□□ -0.4
LINC01238-204ENST00000451070 IFIT5Q13325 482 aaKnown RBP12.57□□□□□ -0.4
LINC01238-204ENST00000451070 LMBR1LQ6UX01 489 aa12.57□□□□□ -0.4
LINC01238-204ENST00000451070 KIAA0825Q8IV33 1275 aa12.57□□□□□ -0.4
LINC01238-204ENST00000451070 CHMP3Q9Y3E7 222 aa12.57□□□□□ -0.4
LINC01238-204ENST00000451070 ECM29Q5VYK3 1845 aa12.57□□□□□ -0.4
LINC01238-204ENST00000451070 ZNF521Q96K83 1311 aa12.57□□□□□ -0.4
LINC01238-204ENST00000451070 CCDC85CA6NKD9 419 aa12.56□□□□□ -0.4
LINC01238-204ENST00000451070 UBE2Q2LH0YL09 131 aa12.56□□□□□ -0.4
LINC01238-204ENST00000451070 DGKZQ13574 1117 aa12.56□□□□□ -0.4
LINC01238-204ENST00000451070 CERS5Q8N5B7 392 aa12.56□□□□□ -0.4
LINC01238-204ENST00000451070 ZNF594Q96JF6 807 aaPredicted RBP12.56□□□□□ -0.4
LINC01238-204ENST00000451070 ALDH1L1O75891 902 aa12.55□□□□□ -0.4
LINC01238-204ENST00000451070 IL1R1P14778 569 aa12.55□□□□□ -0.4
LINC01238-204ENST00000451070 HDAC9Q9UKV0 1011 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms