RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 SAMD7Q7Z3H4 446 aa20.22■□□□□ 0.83
SGCE-208ENST00000450385 OGFOD1Q8N543 542 aa20.22■□□□□ 0.83
SGCE-208ENST00000450385 HSPA1AP0DMV8 641 aaKnown RBP20.21■□□□□ 0.83
SGCE-208ENST00000450385 HSPA1BP0DMV9 641 aaKnown RBP20.21■□□□□ 0.83
SGCE-208ENST00000450385 MAP2K1Q02750 393 aaPredicted RBP20.21■□□□□ 0.83
SGCE-208ENST00000450385 KIF4BQ2VIQ3 1234 aa20.21■□□□□ 0.83
SGCE-208ENST00000450385 HDAC5Q9UQL6 1122 aa20.21■□□□□ 0.83
SGCE-208ENST00000450385 CHMP3Q9Y3E7 222 aa20.21■□□□□ 0.83
SGCE-208ENST00000450385 CELF2O95319 508 aaKnown RBP20.2■□□□□ 0.82
SGCE-208ENST00000450385 TBC1D10BQ4KMP7 808 aaPredicted RBP20.2■□□□□ 0.82
SGCE-208ENST00000450385 GLIS2Q9BZE0 524 aaPredicted RBP20.2■□□□□ 0.82
SGCE-208ENST00000450385 PITPNM2Q9BZ72 1349 aa20.2■□□□□ 0.82
SGCE-208ENST00000450385 WDR33Q9C0J8 1336 aaKnown RBP20.2■□□□□ 0.82
SGCE-208ENST00000450385 TRAF5O00463 557 aa20.19■□□□□ 0.82
SGCE-208ENST00000450385 MAP2K2P36507 400 aa20.19■□□□□ 0.82
SGCE-208ENST00000450385 RABL6Q3YEC7 729 aaPredicted RBP20.19■□□□□ 0.82
SGCE-208ENST00000450385 DACT2Q5SW24 774 aa20.19■□□□□ 0.82
SGCE-208ENST00000450385 TTLL5Q6EMB2 1281 aa20.19■□□□□ 0.82
SGCE-208ENST00000450385 KRT26Q7Z3Y9 468 aa20.19■□□□□ 0.82
SGCE-208ENST00000450385 SAPCD2Q86UD0 394 aa20.19■□□□□ 0.82
SGCE-208ENST00000450385 SHTN1A0MZ66 631 aa20.18■□□□□ 0.82
SGCE-208ENST00000450385 SULF1Q8IWU6 871 aa20.18■□□□□ 0.82
SGCE-208ENST00000450385 CDCA7LQ96GN5 454 aa20.18■□□□□ 0.82
SGCE-208ENST00000450385 MYOZ2Q9NPC6 264 aa20.18■□□□□ 0.82
SGCE-208ENST00000450385 CNNM1Q9NRU3 951 aa20.18■□□□□ 0.82
SGCE-208ENST00000450385 NBPF7P0C2Y1 421 aaPredicted RBP20.17■□□□□ 0.82
SGCE-208ENST00000450385 FKBP1AP62942 108 aaKnown RBP20.17■□□□□ 0.82
SGCE-208ENST00000450385 UBE4AQ14139 1066 aa20.17■□□□□ 0.82
SGCE-208ENST00000450385 EPHA10Q5JZY3 1008 aa20.17■□□□□ 0.82
SGCE-208ENST00000450385 ZNF804AQ7Z570 1209 aa20.17■□□□□ 0.82
SGCE-208ENST00000450385 USP48Q86UV5 1035 aa20.17■□□□□ 0.82
SGCE-208ENST00000450385 AIDAQ96BJ3 306 aa20.17■□□□□ 0.82
SGCE-208ENST00000450385 CD209Q9NNX6 404 aa20.17■□□□□ 0.82
SGCE-208ENST00000450385 SMC4Q9NTJ3 1288 aa20.17■□□□□ 0.82
SGCE-208ENST00000450385 WBP1LQ9NX94 342 aa20.17■□□□□ 0.82
SGCE-208ENST00000450385 WTIPA6NIX2 430 aaPredicted RBP20.16■□□□□ 0.82
SGCE-208ENST00000450385 IL1R1P14778 569 aa20.16■□□□□ 0.82
SGCE-208ENST00000450385 RBM26Q5T8P6 1007 aaKnown RBP20.16■□□□□ 0.82
SGCE-208ENST00000450385 TXNRD3Q86VQ6 643 aa20.16■□□□□ 0.82
SGCE-208ENST00000450385 ARHGAP45Q92619 1136 aa20.16■□□□□ 0.82
SGCE-208ENST00000450385 KAZALD1Q96I82 304 aa20.16■□□□□ 0.82
SGCE-208ENST00000450385 CAPNS2Q96L46 248 aa20.16■□□□□ 0.82
SGCE-208ENST00000450385 HDAC9Q9UKV0 1011 aa20.16■□□□□ 0.82
SGCE-208ENST00000450385 MROH5Q6ZUA9 1318 aa20.16■□□□□ 0.82
SGCE-208ENST00000450385 A0A1B0GUL6 1792 aa20.16■□□□□ 0.82
SGCE-208ENST00000450385 EGFRP00533 1210 aa20.15■□□□□ 0.82
SGCE-208ENST00000450385 SCARF1Q14162 830 aa20.15■□□□□ 0.82
SGCE-208ENST00000450385 C2orf69Q8N8R5 385 aa20.15■□□□□ 0.82
SGCE-208ENST00000450385 SUCLG2Q96I99 432 aa20.15■□□□□ 0.82
SGCE-208ENST00000450385 API5Q9BZZ5 524 aaKnown RBP20.15■□□□□ 0.82
SGCE-208ENST00000450385 USP44Q9H0E7 712 aa20.15■□□□□ 0.82
SGCE-208ENST00000450385 IRS2Q9Y4H2 1338 aa20.15■□□□□ 0.82
SGCE-208ENST00000450385 ZNF646O15015 1829 aaPredicted RBP20.14■□□□□ 0.81
SGCE-208ENST00000450385 CTCFP49711 727 aaPredicted RBP20.14■□□□□ 0.81
SGCE-208ENST00000450385 PRDM10Q9NQV6 1147 aa20.14■□□□□ 0.81
SGCE-208ENST00000450385 RIPOR2Q9Y4F9 1068 aa20.14■□□□□ 0.81
SGCE-208ENST00000450385 TAF5LO75529 589 aa20.13■□□□□ 0.81
SGCE-208ENST00000450385 FKBP1BP68106 108 aa20.13■□□□□ 0.81
SGCE-208ENST00000450385 FMR1Q06787 632 aaKnown RBP eCLIP20.13■□□□□ 0.81
SGCE-208ENST00000450385 BICC1Q9H694 974 aaKnown RBP20.13■□□□□ 0.81
SGCE-208ENST00000450385 GGA3Q9NZ52 723 aa20.13■□□□□ 0.81
SGCE-208ENST00000450385 THSD7BQ9C0I4 1608 aa20.13■□□□□ 0.81
SGCE-208ENST00000450385 CA12O43570 354 aa20.12■□□□□ 0.81
SGCE-208ENST00000450385 SASH1O94885 1247 aa20.12■□□□□ 0.81
SGCE-208ENST00000450385 MTMR14Q8NCE2 650 aa20.12■□□□□ 0.81
SGCE-208ENST00000450385 BEGAINQ9BUH8 593 aa20.12■□□□□ 0.81
SGCE-208ENST00000450385 FBXO3Q9UK99 471 aa20.12■□□□□ 0.81
SGCE-208ENST00000450385 KIF16BQ96L93 1317 aa20.11■□□□□ 0.81
SGCE-208ENST00000450385 GTF2IP78347 998 aa20.11■□□□□ 0.81
SGCE-208ENST00000450385 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
SGCE-208ENST00000450385 HELBQ8NG08 1087 aaPredicted RBP20.11■□□□□ 0.81
SGCE-208ENST00000450385 CCDC102AQ96A19 550 aa20.11■□□□□ 0.81
SGCE-208ENST00000450385 ZNF594Q96JF6 807 aaPredicted RBP20.11■□□□□ 0.81
SGCE-208ENST00000450385 GBA2Q9HCG7 927 aaPredicted RBP20.11■□□□□ 0.81
SGCE-208ENST00000450385 IPO8O15397 1037 aaKnown RBP20.1■□□□□ 0.81
SGCE-208ENST00000450385 RARSP54136 660 aaKnown RBP20.1■□□□□ 0.81
SGCE-208ENST00000450385 NOGQ13253 232 aa20.1■□□□□ 0.81
SGCE-208ENST00000450385 ANGEL2Q5VTE6 544 aaKnown RBP20.1■□□□□ 0.81
SGCE-208ENST00000450385 CYP4F22Q6NT55 531 aa20.1■□□□□ 0.81
SGCE-208ENST00000450385 FBXW7Q969H0 707 aa20.1■□□□□ 0.81
SGCE-208ENST00000450385 ZNF408Q9H9D4 720 aa20.1■□□□□ 0.81
SGCE-208ENST00000450385 NOB1Q9ULX3 412 aaKnown RBP20.1■□□□□ 0.81
SGCE-208ENST00000450385 FAM205AQ6ZU69 1335 aa20.09■□□□□ 0.81
SGCE-208ENST00000450385 WNT10BO00744 389 aa20.09■□□□□ 0.81
SGCE-208ENST00000450385 KLRK1P26718 216 aa20.09■□□□□ 0.81
SGCE-208ENST00000450385 HUNKP57058 714 aa20.09■□□□□ 0.81
SGCE-208ENST00000450385 COL13A1Q5TAT6 717 aaPredicted RBP20.09■□□□□ 0.81
SGCE-208ENST00000450385 PAXIP1Q6ZW49 1069 aaPredicted RBP20.09■□□□□ 0.81
SGCE-208ENST00000450385 REM2Q8IYK8 340 aaPredicted RBP20.09■□□□□ 0.81
SGCE-208ENST00000450385 ANKRD44Q8N8A2 993 aa20.09■□□□□ 0.81
SGCE-208ENST00000450385 FOXN1O15353 648 aa20.08■□□□□ 0.81
SGCE-208ENST00000450385 PLIN1O60240 522 aa20.08■□□□□ 0.81
SGCE-208ENST00000450385 HIBADHP31937 336 aaKnown RBP20.08■□□□□ 0.81
SGCE-208ENST00000450385 APOBEC3FQ8IUX4 373 aaKnown RBP20.08■□□□□ 0.81
SGCE-208ENST00000450385 TDRD7Q8NHU6 1098 aaKnown RBP20.08■□□□□ 0.81
SGCE-208ENST00000450385 ADM5C9JUS6 153 aa20.07■□□□□ 0.8
SGCE-208ENST00000450385 PDE8BO95263 885 aa20.07■□□□□ 0.8
SGCE-208ENST00000450385 UBTFL1P0CB47 393 aaPredicted RBP20.07■□□□□ 0.8
SGCE-208ENST00000450385 RGMBQ6NW40 437 aa20.07■□□□□ 0.8
SGCE-208ENST00000450385 CDCA5Q96FF9 252 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms