RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-208	ENST00000450000	WBP1L	Q9NX94	342 aa		27.77	■■■□□ 2.04
CPSF7-208	ENST00000450000	ZNF521	Q96K83	1311 aa		27.76	■■■□□ 2.03
CPSF7-208	ENST00000450000	EGFR	P00533	1210 aa		27.76	■■■□□ 2.03
CPSF7-208	ENST00000450000	CHRND	Q07001	517 aa		27.76	■■■□□ 2.03
CPSF7-208	ENST00000450000	LMBR1L	Q6UX01	489 aa		27.76	■■■□□ 2.03
CPSF7-208	ENST00000450000	CACNA1F	O60840	1977 aa		27.76	■■■□□ 2.03
CPSF7-208	ENST00000450000	WTIP	A6NIX2	430 aa	Predicted RBP	27.75	■■■□□ 2.03
CPSF7-208	ENST00000450000	GGA3	Q9NZ52	723 aa		27.75	■■■□□ 2.03
CPSF7-208	ENST00000450000	MYO3B	Q8WXR4	1341 aa		27.74	■■■□□ 2.03
CPSF7-208	ENST00000450000	ZNF280A	P59817	542 aa	Predicted RBP	27.74	■■■□□ 2.03
CPSF7-208	ENST00000450000	FOXO4	P98177	505 aa		27.74	■■■□□ 2.03
CPSF7-208	ENST00000450000	SCARF1	Q14162	830 aa		27.74	■■■□□ 2.03
CPSF7-208	ENST00000450000	C2orf69	Q8N8R5	385 aa		27.74	■■■□□ 2.03
CPSF7-208	ENST00000450000	MYOZ2	Q9NPC6	264 aa		27.74	■■■□□ 2.03
CPSF7-208	ENST00000450000	CNNM1	Q9NRU3	951 aa		27.74	■■■□□ 2.03
CPSF7-208	ENST00000450000	MYH3	P11055	1940 aa		27.74	■■■□□ 2.03
CPSF7-208	ENST00000450000	STRIP1	Q5VSL9	837 aa		27.73	■■■□□ 2.03
CPSF7-208	ENST00000450000	HHIPL1	Q96JK4	782 aa		27.73	■■■□□ 2.03
CPSF7-208	ENST00000450000	ADM5	C9JUS6	153 aa		27.72	■■■□□ 2.03
CPSF7-208	ENST00000450000	HUNK	P57058	714 aa		27.72	■■■□□ 2.03
CPSF7-208	ENST00000450000	PRDM10	Q9NQV6	1147 aa		27.72	■■■□□ 2.03
CPSF7-208	ENST00000450000	MAP2K2	P36507	400 aa		27.71	■■■□□ 2.03
CPSF7-208	ENST00000450000	ANGEL2	Q5VTE6	544 aa	Known RBP	27.71	■■■□□ 2.03
CPSF7-208	ENST00000450000	TTLL5	Q6EMB2	1281 aa		27.71	■■■□□ 2.03
CPSF7-208	ENST00000450000	LDHAL6A	Q6ZMR3	332 aa		27.71	■■■□□ 2.03
CPSF7-208	ENST00000450000	GBA2	Q9HCG7	927 aa	Predicted RBP	27.71	■■■□□ 2.03
CPSF7-208	ENST00000450000	TRPM7	Q96QT4	1865 aa		27.7	■■■□□ 2.03
CPSF7-208	ENST00000450000	PLIN1	O60240	522 aa		27.7	■■■□□ 2.02
CPSF7-208	ENST00000450000	TAF5L	O75529	589 aa		27.7	■■■□□ 2.02
CPSF7-208	ENST00000450000	CAPN15	O75808	1086 aa		27.7	■■■□□ 2.02
CPSF7-208	ENST00000450000	MRPL50	Q8N5N7	158 aa	Known RBP	27.7	■■■□□ 2.02
CPSF7-208	ENST00000450000	HELB	Q8NG08	1087 aa	Predicted RBP	27.7	■■■□□ 2.02
CPSF7-208	ENST00000450000	HDAC9	Q9UKV0	1011 aa		27.7	■■■□□ 2.02
CPSF7-208	ENST00000450000	PTPRC	P08575	1304 aa		27.69	■■■□□ 2.02
CPSF7-208	ENST00000450000	LBX1	P52954	281 aa		27.69	■■■□□ 2.02
CPSF7-208	ENST00000450000	SLFN5	Q08AF3	891 aa		27.69	■■■□□ 2.02
CPSF7-208	ENST00000450000	DACT2	Q5SW24	774 aa		27.69	■■■□□ 2.02
CPSF7-208	ENST00000450000	TXNRD3	Q86VQ6	643 aa		27.69	■■■□□ 2.02
CPSF7-208	ENST00000450000	GML	Q99445	158 aa		27.69	■■■□□ 2.02
CPSF7-208	ENST00000450000	ZNF609	O15014	1411 aa		27.68	■■■□□ 2.02
CPSF7-208	ENST00000450000	AOC2	O75106	756 aa		27.68	■■■□□ 2.02
CPSF7-208	ENST00000450000	GTF2I	P78347	998 aa		27.68	■■■□□ 2.02
CPSF7-208	ENST00000450000	DLK2	Q6UY11	383 aa		27.68	■■■□□ 2.02
CPSF7-208	ENST00000450000	SPEF2	Q9C093	1822 aa		27.67	■■■□□ 2.02
CPSF7-208	ENST00000450000	KLRK1	P26718	216 aa		27.67	■■■□□ 2.02
CPSF7-208	ENST00000450000	MMP14	P50281	582 aa		27.67	■■■□□ 2.02
CPSF7-208	ENST00000450000	EPHA10	Q5JZY3	1008 aa		27.67	■■■□□ 2.02
CPSF7-208	ENST00000450000	ZNF804A	Q7Z570	1209 aa		27.67	■■■□□ 2.02
CPSF7-208	ENST00000450000	ZNF594	Q96JF6	807 aa	Predicted RBP	27.67	■■■□□ 2.02
CPSF7-208	ENST00000450000	MXD3	Q9BW11	206 aa		27.67	■■■□□ 2.02
CPSF7-208	ENST00000450000	CCER2	I3L3R5	266 aa		27.66	■■■□□ 2.02
CPSF7-208	ENST00000450000	CD209	Q9NNX6	404 aa		27.66	■■■□□ 2.02
CPSF7-208	ENST00000450000	SCN9A	Q15858	1988 aa		27.66	■■■□□ 2.02
CPSF7-208	ENST00000450000	ASTN2	O75129	1339 aa	Predicted RBP	27.66	■■■□□ 2.02
CPSF7-208	ENST00000450000	SSH1	Q8WYL5	1049 aa		27.65	■■■□□ 2.02
CPSF7-208	ENST00000450000	CDCA5	Q96FF9	252 aa		27.65	■■■□□ 2.02
CPSF7-208	ENST00000450000	PCNT	O95613	3336 aa		27.64	■■■□□ 2.02
CPSF7-208	ENST00000450000	NOG	Q13253	232 aa		27.64	■■■□□ 2.02
CPSF7-208	ENST00000450000	RGMB	Q6NW40	437 aa		27.64	■■■□□ 2.02
CPSF7-208	ENST00000450000	KIAA0825	Q8IV33	1275 aa		27.64	■■■□□ 2.02
CPSF7-208	ENST00000450000	SUCLG2	Q96I99	432 aa		27.64	■■■□□ 2.02
CPSF7-208	ENST00000450000	SMC4	Q9NTJ3	1288 aa		27.64	■■■□□ 2.02
CPSF7-208	ENST00000450000	PITPNM2	Q9BZ72	1349 aa		27.64	■■■□□ 2.01
CPSF7-208	ENST00000450000	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.63	■■■□□ 2.01
CPSF7-208	ENST00000450000	HSPA8	P11142	646 aa	Known RBP	27.63	■■■□□ 2.01
CPSF7-208	ENST00000450000	SNAP23	O00161	211 aa		27.62	■■■□□ 2.01
CPSF7-208	ENST00000450000	ZNF157	P51786	506 aa	Predicted RBP	27.62	■■■□□ 2.01
CPSF7-208	ENST00000450000	ALDH1L2	Q3SY69	923 aa		27.62	■■■□□ 2.01
CPSF7-208	ENST00000450000	CCDC102A	Q96A19	550 aa		27.62	■■■□□ 2.01
CPSF7-208	ENST00000450000	CDCA7L	Q96GN5	454 aa		27.62	■■■□□ 2.01
CPSF7-208	ENST00000450000	CA12	O43570	354 aa		27.61	■■■□□ 2.01
CPSF7-208	ENST00000450000	NBPF9	Q3BBW0	867 aa		27.61	■■■□□ 2.01
CPSF7-208	ENST00000450000	C15orf52	Q6ZUT6	534 aa	Known RBP	27.61	■■■□□ 2.01
CPSF7-208	ENST00000450000	NF2	P35240	595 aa		27.6	■■■□□ 2.01
CPSF7-208	ENST00000450000	BRPF1	P55201	1214 aa	Predicted RBP	27.6	■■■□□ 2.01
CPSF7-208	ENST00000450000	WNT10B	O00744	389 aa		27.59	■■■□□ 2.01
CPSF7-208	ENST00000450000	TTLL12	Q14166	644 aa	Predicted RBP	27.59	■■■□□ 2.01
CPSF7-208	ENST00000450000	BICC1	Q9H694	974 aa	Known RBP	27.59	■■■□□ 2.01
CPSF7-208	ENST00000450000	SASH1	O94885	1247 aa		27.58	■■■□□ 2.01
CPSF7-208	ENST00000450000	UTY	O14607	1347 aa		27.58	■■■□□ 2.01
CPSF7-208	ENST00000450000	CT47B1	P0C2W7	299 aa	Predicted RBP	27.57	■■■□□ 2
CPSF7-208	ENST00000450000	FKBP1B	P68106	108 aa		27.57	■■■□□ 2
CPSF7-208	ENST00000450000	UBE4A	Q14139	1066 aa		27.57	■■■□□ 2
CPSF7-208	ENST00000450000	DLGAP5	Q15398	846 aa		27.57	■■■□□ 2
CPSF7-208	ENST00000450000		F8W031	263 aa	Predicted RBP	27.56	■■■□□ 2
CPSF7-208	ENST00000450000	IL1R1	P14778	569 aa		27.56	■■■□□ 2
CPSF7-208	ENST00000450000	VPS37D	Q86XT2	251 aa		27.56	■■■□□ 2
CPSF7-208	ENST00000450000	APOBEC3F	Q8IUX4	373 aa	Known RBP	27.56	■■■□□ 2
CPSF7-208	ENST00000450000	SCAF8	Q9UPN6	1271 aa	Known RBP	27.56	■■■□□ 2
CPSF7-208	ENST00000450000	MROH5	Q6ZUA9	1318 aa		27.56	■■■□□ 2
CPSF7-208	ENST00000450000	MYO1B	O43795	1136 aa		27.55	■■■□□ 2
CPSF7-208	ENST00000450000	TSKS	Q9UJT2	592 aa		27.55	■■■□□ 2
CPSF7-208	ENST00000450000	HIBADH	P31937	336 aa	Known RBP	27.54	■■■□□ 2
CPSF7-208	ENST00000450000	PSME4	Q14997	1843 aa		27.54	■■■□□ 2
CPSF7-208	ENST00000450000	METTL24	Q5JXM2	366 aa		27.54	■■■□□ 2
CPSF7-208	ENST00000450000	KAZALD1	Q96I82	304 aa		27.54	■■■□□ 2
CPSF7-208	ENST00000450000	PUS3	Q9BZE2	481 aa	Known RBP	27.54	■■■□□ 2
CPSF7-208	ENST00000450000	RBM5	P52756	815 aa	Known RBP eCLIP	27.53	■■■□□ 2
CPSF7-208	ENST00000450000	RABL6	Q3YEC7	729 aa	Predicted RBP	27.53	■■■□□ 2
CPSF7-208	ENST00000450000	JAG2	Q9Y219	1238 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms