RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 CACTINQ8WUQ7 758 aaKnown RBP13.27□□□□□ -0.29
SYVN1-204ENST00000449943 C5P01031 1676 aa13.27□□□□□ -0.29
SYVN1-204ENST00000449943 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
SYVN1-204ENST00000449943 E7EWF7 191 aa13.26□□□□□ -0.29
SYVN1-204ENST00000449943 TNNT1P13805 278 aa13.26□□□□□ -0.29
SYVN1-204ENST00000449943 FILIP1Q7Z7B0 1213 aa13.26□□□□□ -0.29
SYVN1-204ENST00000449943 PDCL2Q8N4E4 241 aa13.26□□□□□ -0.29
SYVN1-204ENST00000449943 FSIP1Q8NA03 581 aa13.26□□□□□ -0.29
SYVN1-204ENST00000449943 PLBD2Q8NHP8 589 aa13.26□□□□□ -0.29
SYVN1-204ENST00000449943 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
SYVN1-204ENST00000449943 HMGB1P09429 215 aaKnown RBP13.26□□□□□ -0.29
SYVN1-204ENST00000449943 SMARCC2Q8TAQ2 1214 aa13.26□□□□□ -0.29
SYVN1-204ENST00000449943 HSPD1P10809 573 aaKnown RBP13.26□□□□□ -0.29
SYVN1-204ENST00000449943 GNL2Q13823 731 aaKnown RBP13.26□□□□□ -0.29
SYVN1-204ENST00000449943 CHMP4CQ96CF2 233 aa13.26□□□□□ -0.29
SYVN1-204ENST00000449943 MRC1P22897 1456 aa13.25□□□□□ -0.29
SYVN1-204ENST00000449943 WASHC4Q2M389 1173 aa13.25□□□□□ -0.29
SYVN1-204ENST00000449943 SH3TC1Q8TE82 1336 aa13.25□□□□□ -0.29
SYVN1-204ENST00000449943 FOXO4P98177 505 aa13.25□□□□□ -0.29
SYVN1-204ENST00000449943 STX1AQ16623 288 aa13.25□□□□□ -0.29
SYVN1-204ENST00000449943 ATG9AQ7Z3C6 839 aa13.25□□□□□ -0.29
SYVN1-204ENST00000449943 ADD1P35611 737 aaKnown RBP13.25□□□□□ -0.29
SYVN1-204ENST00000449943 ZNF396Q96N95 335 aaPredicted RBP13.25□□□□□ -0.29
SYVN1-204ENST00000449943 CWC25Q9NXE8 425 aaPredicted RBP13.25□□□□□ -0.29
SYVN1-204ENST00000449943 LLPHQ9BRT6 129 aaKnown RBP13.25□□□□□ -0.29
SYVN1-204ENST00000449943 PUS3Q9BZE2 481 aaKnown RBP13.25□□□□□ -0.29
SYVN1-204ENST00000449943 MAST3O60307 1309 aa13.25□□□□□ -0.29
SYVN1-204ENST00000449943 M0R2C6 588 aa13.24□□□□□ -0.29
SYVN1-204ENST00000449943 A1BGP04217 495 aa13.24□□□□□ -0.29
SYVN1-204ENST00000449943 CASP7P55210 303 aa13.24□□□□□ -0.29
SYVN1-204ENST00000449943 NAA16Q6N069 864 aaPredicted RBP13.24□□□□□ -0.29
SYVN1-204ENST00000449943 HELLSQ9NRZ9 838 aa13.24□□□□□ -0.29
SYVN1-204ENST00000449943 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
SYVN1-204ENST00000449943 NBPF26B4DH59 902 aa13.24□□□□□ -0.29
SYVN1-204ENST00000449943 NBPF14Q5TI25 921 aa13.24□□□□□ -0.29
SYVN1-204ENST00000449943 NBPF10Q6P3W6 841 aaKnown RBP13.24□□□□□ -0.29
SYVN1-204ENST00000449943 NBPF15Q8N660 670 aa13.24□□□□□ -0.29
SYVN1-204ENST00000449943 POLR3DP05423 398 aaPredicted RBP13.24□□□□□ -0.29
SYVN1-204ENST00000449943 SF3A1Q15459 793 aaKnown RBP13.24□□□□□ -0.29
SYVN1-204ENST00000449943 MEX3CQ5U5Q3 659 aaKnown RBP13.24□□□□□ -0.29
SYVN1-204ENST00000449943 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.24□□□□□ -0.29
SYVN1-204ENST00000449943 SDF4Q9BRK5 362 aa13.24□□□□□ -0.29
SYVN1-204ENST00000449943 RGPD5Q99666 1765 aa13.24□□□□□ -0.29
SYVN1-204ENST00000449943 PHRF1Q9P1Y6 1649 aaKnown RBP13.24□□□□□ -0.29
SYVN1-204ENST00000449943 PDIA3P30101 505 aaKnown RBP13.23□□□□□ -0.29
SYVN1-204ENST00000449943 ZMYM1Q5SVZ6 1142 aa13.23□□□□□ -0.29
SYVN1-204ENST00000449943 DSCC1Q9BVC3 393 aa13.23□□□□□ -0.29
SYVN1-204ENST00000449943 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
SYVN1-204ENST00000449943 RNF113AO15541 343 aaKnown RBP13.23□□□□□ -0.29
SYVN1-204ENST00000449943 ATP2B3Q16720 1220 aa13.23□□□□□ -0.29
SYVN1-204ENST00000449943 AOPEPQ8N6M6 819 aa13.23□□□□□ -0.29
SYVN1-204ENST00000449943 A0A1B0GVL5 298 aa13.23□□□□□ -0.29
SYVN1-204ENST00000449943 IQCB1Q15051 598 aa13.23□□□□□ -0.29
SYVN1-204ENST00000449943 RFX7Q2KHR2 1363 aa13.23□□□□□ -0.29
SYVN1-204ENST00000449943 U2AF2P26368 475 aaKnown RBP eCLIP13.23□□□□□ -0.29
SYVN1-204ENST00000449943 IL15P40933 162 aaPredicted RBP13.23□□□□□ -0.29
SYVN1-204ENST00000449943 SIPA1L3O60292 1781 aaPredicted RBP13.22□□□□□ -0.29
SYVN1-204ENST00000449943 EXOSC10Q01780 885 aaKnown RBP13.22□□□□□ -0.29
SYVN1-204ENST00000449943 TRMT1Q9NXH9 659 aaKnown RBP13.22□□□□□ -0.29
SYVN1-204ENST00000449943 FAM160A1Q05DH4 1040 aa13.22□□□□□ -0.29
SYVN1-204ENST00000449943 GJB4Q9NTQ9 266 aa13.22□□□□□ -0.29
SYVN1-204ENST00000449943 H7C1W4 665 aa13.22□□□□□ -0.29
SYVN1-204ENST00000449943 EYA2O00167 538 aa13.22□□□□□ -0.29
SYVN1-204ENST00000449943 CTAGE5O15320 804 aa13.22□□□□□ -0.29
SYVN1-204ENST00000449943 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
SYVN1-204ENST00000449943 NAA30Q147X3 362 aaPredicted RBP13.22□□□□□ -0.29
SYVN1-204ENST00000449943 STK38Q15208 465 aa13.22□□□□□ -0.29
SYVN1-204ENST00000449943 TTC39AQ5SRH9 613 aa13.22□□□□□ -0.29
SYVN1-204ENST00000449943 KIF6Q6ZMV9 814 aa13.22□□□□□ -0.29
SYVN1-204ENST00000449943 OSBP2Q969R2 916 aa13.22□□□□□ -0.29
SYVN1-204ENST00000449943 ANO10Q9NW15 660 aa13.21□□□□□ -0.29
SYVN1-204ENST00000449943 C1orf167Q5SNV9 1468 aa13.21□□□□□ -0.29
SYVN1-204ENST00000449943 CARMIL3Q8ND23 1372 aa13.21□□□□□ -0.29
SYVN1-204ENST00000449943 PALLDQ8WX93 1383 aa13.21□□□□□ -0.29
SYVN1-204ENST00000449943 USP27XA6NNY8 438 aa13.21□□□□□ -0.29
SYVN1-204ENST00000449943 BIN1O00499 593 aa13.21□□□□□ -0.29
SYVN1-204ENST00000449943 AEBP2Q6ZN18 517 aaPredicted RBP13.21□□□□□ -0.29
SYVN1-204ENST00000449943 CCDC112Q8NEF3 446 aa13.21□□□□□ -0.29
SYVN1-204ENST00000449943 ADORA1P30542 326 aa13.21□□□□□ -0.29
SYVN1-204ENST00000449943 ILDR1Q86SU0 546 aaPredicted RBP13.21□□□□□ -0.29
SYVN1-204ENST00000449943 CEP57L1Q8IYX8 460 aa13.21□□□□□ -0.29
SYVN1-204ENST00000449943 PCDHA7Q9UN72 937 aa13.21□□□□□ -0.29
SYVN1-204ENST00000449943 GOLGA8BA8MQT2 603 aa13.21□□□□□ -0.3
SYVN1-204ENST00000449943 SKILP12757 684 aa13.21□□□□□ -0.3
SYVN1-204ENST00000449943 LRRC8AQ8IWT6 810 aa13.21□□□□□ -0.3
SYVN1-204ENST00000449943 SMAP1Q8IYB5 467 aaPredicted RBP13.21□□□□□ -0.3
SYVN1-204ENST00000449943 C19orf44Q9H6X5 657 aa13.21□□□□□ -0.3
SYVN1-204ENST00000449943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.3
SYVN1-204ENST00000449943 CEP126Q9P2H0 1117 aa13.21□□□□□ -0.3
SYVN1-204ENST00000449943 CCDC69A6NI79 296 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 CAVIN2O95810 425 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
SYVN1-204ENST00000449943 KLF18A0A0U1RQI7 1052 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 SMTNL1A8MU46 457 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 DHX40Q8IX18 779 aaKnown RBP13.2□□□□□ -0.3
SYVN1-204ENST00000449943 C8orf76Q96K31 380 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 CPLX1O14810 134 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 CEP135Q66GS9 1140 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 CLIC4Q9Y696 253 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 AFDNP55196 1824 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms