RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 DACT2Q5SW24 774 aa17.77■□□□□ 0.44
CPSF7-207ENST00000449811 DUSP27Q5VZP5 1158 aa17.77■□□□□ 0.44
CPSF7-207ENST00000449811 INTS3Q68E01 1043 aaKnown RBP17.77■□□□□ 0.44
CPSF7-207ENST00000449811 FBXW7Q969H0 707 aa17.77■□□□□ 0.44
CPSF7-207ENST00000449811 MYD88Q99836 296 aa17.77■□□□□ 0.44
CPSF7-207ENST00000449811 MED23Q9ULK4 1368 aa17.77■□□□□ 0.43
CPSF7-207ENST00000449811 MYO3BQ8WXR4 1341 aa17.76■□□□□ 0.43
CPSF7-207ENST00000449811 SASH1O94885 1247 aa17.76■□□□□ 0.43
CPSF7-207ENST00000449811 SPRYD7Q5W111 196 aa17.76■□□□□ 0.43
CPSF7-207ENST00000449811 CCDC146Q8IYE0 955 aa17.76■□□□□ 0.43
CPSF7-207ENST00000449811 CCDC191Q8NCU4 936 aa17.76■□□□□ 0.43
CPSF7-207ENST00000449811 BRCA2P51587 3418 aa17.75■□□□□ 0.43
CPSF7-207ENST00000449811 WTIPA6NIX2 430 aaPredicted RBP17.75■□□□□ 0.43
CPSF7-207ENST00000449811 LDLRAD1Q5T700 205 aa17.75■□□□□ 0.43
CPSF7-207ENST00000449811 OTOP1Q7RTM1 612 aa17.75■□□□□ 0.43
CPSF7-207ENST00000449811 APOBEC3FQ8IUX4 373 aaKnown RBP17.75■□□□□ 0.43
CPSF7-207ENST00000449811 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
CPSF7-207ENST00000449811 ANGEL1Q9UNK9 670 aaKnown RBP17.75■□□□□ 0.43
CPSF7-207ENST00000449811 TRIM35Q9UPQ4 493 aa17.75■□□□□ 0.43
CPSF7-207ENST00000449811 MANSC4A6NHS7 340 aaPredicted RBP17.74■□□□□ 0.43
CPSF7-207ENST00000449811 STRIP1Q5VSL9 837 aa17.74■□□□□ 0.43
CPSF7-207ENST00000449811 CDC5LQ99459 802 aaKnown RBP17.74■□□□□ 0.43
CPSF7-207ENST00000449811 PHAXQ9H814 394 aaKnown RBP17.74■□□□□ 0.43
CPSF7-207ENST00000449811 CWC25Q9NXE8 425 aaPredicted RBP17.74■□□□□ 0.43
CPSF7-207ENST00000449811 MMP14P50281 582 aa17.73■□□□□ 0.43
CPSF7-207ENST00000449811 INHBEP58166 350 aa17.73■□□□□ 0.43
CPSF7-207ENST00000449811 IFNL1Q8IU54 200 aa17.73■□□□□ 0.43
CPSF7-207ENST00000449811 COA1Q9GZY4 146 aa17.73■□□□□ 0.43
CPSF7-207ENST00000449811 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.72■□□□□ 0.43
CPSF7-207ENST00000449811 MINPP1Q9UNW1 487 aa17.72■□□□□ 0.43
CPSF7-207ENST00000449811 FZD1Q9UP38 647 aa17.72■□□□□ 0.43
CPSF7-207ENST00000449811 CCT4P50991 539 aaKnown RBP17.71■□□□□ 0.43
CPSF7-207ENST00000449811 CTSWP56202 376 aa17.71■□□□□ 0.43
CPSF7-207ENST00000449811 SLC10A4Q96EP9 437 aa17.71■□□□□ 0.43
CPSF7-207ENST00000449811 MBIPQ9NS73 344 aa17.71■□□□□ 0.43
CPSF7-207ENST00000449811 BSDC1Q9NW68 430 aaPredicted RBP17.71■□□□□ 0.43
CPSF7-207ENST00000449811 ZNF646O15015 1829 aaPredicted RBP17.7■□□□□ 0.42
CPSF7-207ENST00000449811 COL1A1P02452 1464 aaPredicted RBP17.7■□□□□ 0.42
CPSF7-207ENST00000449811 IGF2BP3O00425 579 aaKnown RBP eCLIP17.7■□□□□ 0.42
CPSF7-207ENST00000449811 ZBTB48P10074 688 aaPredicted RBP17.7■□□□□ 0.42
CPSF7-207ENST00000449811 FXR1P51114 621 aaKnown RBP eCLIP17.7■□□□□ 0.42
CPSF7-207ENST00000449811 TTLL5Q6EMB2 1281 aa17.7■□□□□ 0.42
CPSF7-207ENST00000449811 KIAA0825Q8IV33 1275 aa17.7■□□□□ 0.42
CPSF7-207ENST00000449811 ERO1AQ96HE7 468 aa17.7■□□□□ 0.42
CPSF7-207ENST00000449811 PTPN22Q9Y2R2 807 aa17.7■□□□□ 0.42
CPSF7-207ENST00000449811 TXNRD3Q86VQ6 643 aa17.69■□□□□ 0.42
CPSF7-207ENST00000449811 TTLL11Q8NHH1 800 aa17.69■□□□□ 0.42
CPSF7-207ENST00000449811 RUNDC1Q96C34 613 aa17.69■□□□□ 0.42
CPSF7-207ENST00000449811 ZBED3Q96IU2 234 aaPredicted RBP17.69■□□□□ 0.42
CPSF7-207ENST00000449811 WNK4Q96J92 1243 aa17.69■□□□□ 0.42
CPSF7-207ENST00000449811 METTL22Q9BUU2 404 aaPredicted RBP17.69■□□□□ 0.42
CPSF7-207ENST00000449811 DEFB129Q9H1M3 183 aa17.69■□□□□ 0.42
CPSF7-207ENST00000449811 GREM2Q9H772 168 aa17.69■□□□□ 0.42
CPSF7-207ENST00000449811 DDX58O95786 925 aaKnown RBP17.68■□□□□ 0.42
CPSF7-207ENST00000449811 EN2P19622 333 aaPredicted RBP17.68■□□□□ 0.42
CPSF7-207ENST00000449811 RALBP1Q15311 655 aa17.68■□□□□ 0.42
CPSF7-207ENST00000449811 MAP3K11Q16584 847 aa17.68■□□□□ 0.42
CPSF7-207ENST00000449811 CD99L2Q8TCZ2 262 aa17.68■□□□□ 0.42
CPSF7-207ENST00000449811 ARMC5Q96C12 935 aa17.68■□□□□ 0.42
CPSF7-207ENST00000449811 CLMNQ96JQ2 1002 aa17.68■□□□□ 0.42
CPSF7-207ENST00000449811 LEMD3Q9Y2U8 911 aa17.68■□□□□ 0.42
CPSF7-207ENST00000449811 RBBP6Q7Z6E9 1792 aaKnown RBP17.68■□□□□ 0.42
CPSF7-207ENST00000449811 PPP1R12BO60237 982 aaPredicted RBP17.67■□□□□ 0.42
CPSF7-207ENST00000449811 EFCC1Q9HA90 598 aa17.67■□□□□ 0.42
CPSF7-207ENST00000449811 ELL2O00472 640 aaPredicted RBP17.66■□□□□ 0.42
CPSF7-207ENST00000449811 KLRK1P26718 216 aa17.66■□□□□ 0.42
CPSF7-207ENST00000449811 GTF2IP78347 998 aa17.66■□□□□ 0.42
CPSF7-207ENST00000449811 CRHR2Q13324 411 aa17.66■□□□□ 0.42
CPSF7-207ENST00000449811 DLGAP5Q15398 846 aa17.66■□□□□ 0.42
CPSF7-207ENST00000449811 OTUD7BQ6GQQ9 843 aa17.66■□□□□ 0.42
CPSF7-207ENST00000449811 SSC5DA1L4H1 1573 aa17.66■□□□□ 0.42
CPSF7-207ENST00000449811 SPEF2Q9C093 1822 aa17.65■□□□□ 0.42
CPSF7-207ENST00000449811 UNCXA6NJT0 531 aa17.65■□□□□ 0.42
CPSF7-207ENST00000449811 IGHMBP2P38935 993 aaKnown RBP17.65■□□□□ 0.42
CPSF7-207ENST00000449811 TMEM106CQ9BVX2 250 aa17.65■□□□□ 0.42
CPSF7-207ENST00000449811 MAP3K2Q9Y2U5 619 aa17.65■□□□□ 0.42
CPSF7-207ENST00000449811 PPP2R3BQ9Y5P8 575 aa17.65■□□□□ 0.42
CPSF7-207ENST00000449811 ZNF804BA4D1E1 1349 aa17.65■□□□□ 0.42
CPSF7-207ENST00000449811 SP3Q02447 781 aa17.64■□□□□ 0.41
CPSF7-207ENST00000449811 WDR43Q15061 677 aaKnown RBP eCLIP17.64■□□□□ 0.41
CPSF7-207ENST00000449811 KIAA0100Q14667 2235 aaKnown RBP17.63■□□□□ 0.41
CPSF7-207ENST00000449811 IGKV5-2P06315 115 aa17.63■□□□□ 0.41
CPSF7-207ENST00000449811 ZNF853P0CG23 659 aa17.63■□□□□ 0.41
CPSF7-207ENST00000449811 SUPT20HL1Q3ZLR7 823 aa17.63■□□□□ 0.41
CPSF7-207ENST00000449811 ANKRD2Q9GZV1 360 aa17.63■□□□□ 0.41
CPSF7-207ENST00000449811 COLQQ9Y215 455 aaPredicted RBP17.63■□□□□ 0.41
CPSF7-207ENST00000449811 LAMB1P07942 1786 aa17.63■□□□□ 0.41
CPSF7-207ENST00000449811 MYO1BO43795 1136 aa17.62■□□□□ 0.41
CPSF7-207ENST00000449811 GJA5P36382 358 aa17.62■□□□□ 0.41
CPSF7-207ENST00000449811 IREB2P48200 963 aaKnown RBP17.62■□□□□ 0.41
CPSF7-207ENST00000449811 MTMR14Q8NCE2 650 aa17.62■□□□□ 0.41
CPSF7-207ENST00000449811 ZNF333Q96JL9 665 aa17.62■□□□□ 0.41
CPSF7-207ENST00000449811 IFT57Q9NWB7 429 aa17.62■□□□□ 0.41
CPSF7-207ENST00000449811 MYH3P11055 1940 aa17.61■□□□□ 0.41
CPSF7-207ENST00000449811 CLRN2A0PK11 232 aa17.61■□□□□ 0.41
CPSF7-207ENST00000449811 TESPA1A2RU30 521 aaPredicted RBP17.61■□□□□ 0.41
CPSF7-207ENST00000449811 KCNJ4P48050 445 aa17.61■□□□□ 0.41
CPSF7-207ENST00000449811 CAP1Q01518 475 aa17.61■□□□□ 0.41
CPSF7-207ENST00000449811 CCDC30Q5VVM6 783 aa17.61■□□□□ 0.41
CPSF7-207ENST00000449811 KSR2Q6VAB6 950 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms