RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 AGBL3Q8NEM8 1001 aa17.72■□□□□ 0.43
RTFDC1-204ENST00000449062 CREBZFQ9NS37 354 aa17.72■□□□□ 0.43
RTFDC1-204ENST00000449062 PCNTO95613 3336 aa17.72■□□□□ 0.43
RTFDC1-204ENST00000449062 ZNF609O15014 1411 aa17.72■□□□□ 0.43
RTFDC1-204ENST00000449062 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
RTFDC1-204ENST00000449062 USP17L3A6NCW0 530 aa17.71■□□□□ 0.43
RTFDC1-204ENST00000449062 USP17L4A6NCW7 530 aa17.71■□□□□ 0.43
RTFDC1-204ENST00000449062 G3V3G9 751 aa17.71■□□□□ 0.43
RTFDC1-204ENST00000449062 RFX5P48382 616 aaPredicted RBP17.71■□□□□ 0.43
RTFDC1-204ENST00000449062 ZNF280AP59817 542 aaPredicted RBP17.71■□□□□ 0.43
RTFDC1-204ENST00000449062 DACT2Q5SW24 774 aa17.71■□□□□ 0.43
RTFDC1-204ENST00000449062 DCAF8Q5TAQ9 597 aa17.71■□□□□ 0.43
RTFDC1-204ENST00000449062 USP17L1Q7RTZ2 530 aa17.71■□□□□ 0.43
RTFDC1-204ENST00000449062 STRIP1Q5VSL9 837 aa17.7■□□□□ 0.42
RTFDC1-204ENST00000449062 TNNQ9UQP3 1299 aa17.7■□□□□ 0.42
RTFDC1-204ENST00000449062 KIF16BQ96L93 1317 aa17.7■□□□□ 0.42
RTFDC1-204ENST00000449062 TRIM27P14373 513 aa17.69■□□□□ 0.42
RTFDC1-204ENST00000449062 CST9Q5W186 159 aa17.69■□□□□ 0.42
RTFDC1-204ENST00000449062 CD209Q9NNX6 404 aa17.69■□□□□ 0.42
RTFDC1-204ENST00000449062 CNNM1Q9NRU3 951 aa17.69■□□□□ 0.42
RTFDC1-204ENST00000449062 TMEM88BA6NKF7 163 aa17.68■□□□□ 0.42
RTFDC1-204ENST00000449062 TRAF5O00463 557 aa17.68■□□□□ 0.42
RTFDC1-204ENST00000449062 IPO8O15397 1037 aaKnown RBP17.68■□□□□ 0.42
RTFDC1-204ENST00000449062 TBC1D10BQ4KMP7 808 aaPredicted RBP17.68■□□□□ 0.42
RTFDC1-204ENST00000449062 LRRC24Q50LG9 513 aa17.68■□□□□ 0.42
RTFDC1-204ENST00000449062 TAF7LQ5H9L4 462 aa17.68■□□□□ 0.42
RTFDC1-204ENST00000449062 ATF7IPQ6VMQ6 1270 aa17.68■□□□□ 0.42
RTFDC1-204ENST00000449062 MXD3Q9BW11 206 aa17.68■□□□□ 0.42
RTFDC1-204ENST00000449062 IL1R1P14778 569 aa17.67■□□□□ 0.42
RTFDC1-204ENST00000449062 PTPN12Q05209 780 aaKnown RBP17.67■□□□□ 0.42
RTFDC1-204ENST00000449062 UBE4AQ14139 1066 aa17.67■□□□□ 0.42
RTFDC1-204ENST00000449062 VGLL2Q8N8G2 317 aa17.67■□□□□ 0.42
RTFDC1-204ENST00000449062 KLHDC4Q8TBB5 520 aa17.67■□□□□ 0.42
RTFDC1-204ENST00000449062 MEIS3Q99687 375 aa17.67■□□□□ 0.42
RTFDC1-204ENST00000449062 GLIS2Q9BZE0 524 aaPredicted RBP17.67■□□□□ 0.42
RTFDC1-204ENST00000449062 SPEF2Q9C093 1822 aa17.67■□□□□ 0.42
RTFDC1-204ENST00000449062 PLIN1O60240 522 aa17.66■□□□□ 0.42
RTFDC1-204ENST00000449062 USP17L8P0C7I0 530 aa17.66■□□□□ 0.42
RTFDC1-204ENST00000449062 UBTFL1P0CB47 393 aaPredicted RBP17.66■□□□□ 0.42
RTFDC1-204ENST00000449062 KCNJ4P48050 445 aa17.66■□□□□ 0.42
RTFDC1-204ENST00000449062 RBM26Q5T8P6 1007 aaKnown RBP17.66■□□□□ 0.42
RTFDC1-204ENST00000449062 TTLL5Q6EMB2 1281 aa17.66■□□□□ 0.42
RTFDC1-204ENST00000449062 FAM84BQ96KN1 310 aaPredicted RBP17.66■□□□□ 0.42
RTFDC1-204ENST00000449062 MROH5Q6ZUA9 1318 aa17.66■□□□□ 0.42
RTFDC1-204ENST00000449062 DLK2Q6UY11 383 aa17.65■□□□□ 0.42
RTFDC1-204ENST00000449062 CDC37L1Q7L3B6 337 aa17.65■□□□□ 0.42
RTFDC1-204ENST00000449062 GTF2IP78347 998 aa17.64■□□□□ 0.41
RTFDC1-204ENST00000449062 KIF4BQ2VIQ3 1234 aa17.64■□□□□ 0.41
RTFDC1-204ENST00000449062 ATG9AQ7Z3C6 839 aa17.64■□□□□ 0.41
RTFDC1-204ENST00000449062 FBXO33Q7Z6M2 555 aa17.64■□□□□ 0.41
RTFDC1-204ENST00000449062 USP48Q86UV5 1035 aa17.64■□□□□ 0.41
RTFDC1-204ENST00000449062 CERS5Q8N5B7 392 aa17.64■□□□□ 0.41
RTFDC1-204ENST00000449062 TDRD7Q8NHU6 1098 aaKnown RBP17.64■□□□□ 0.41
RTFDC1-204ENST00000449062 LRRFIP2Q9Y608 721 aaKnown RBP17.64■□□□□ 0.41
RTFDC1-204ENST00000449062 ASTN2O75129 1339 aaPredicted RBP17.64■□□□□ 0.41
RTFDC1-204ENST00000449062 RASSF10A6NK89 507 aa17.63■□□□□ 0.41
RTFDC1-204ENST00000449062 EYA2O00167 538 aa17.63■□□□□ 0.41
RTFDC1-204ENST00000449062 SASH1O94885 1247 aa17.63■□□□□ 0.41
RTFDC1-204ENST00000449062 PDE8BO95263 885 aa17.63■□□□□ 0.41
RTFDC1-204ENST00000449062 FGFR2P21802 821 aa17.63■□□□□ 0.41
RTFDC1-204ENST00000449062 MMP14P50281 582 aa17.63■□□□□ 0.41
RTFDC1-204ENST00000449062 SCARF1Q14162 830 aa17.63■□□□□ 0.41
RTFDC1-204ENST00000449062 FRAT1Q92837 279 aaPredicted RBP17.63■□□□□ 0.41
RTFDC1-204ENST00000449062 MYOZ2Q9NPC6 264 aa17.63■□□□□ 0.41
RTFDC1-204ENST00000449062 MKRN1Q9UHC7 482 aaKnown RBP17.63■□□□□ 0.41
RTFDC1-204ENST00000449062 PSME4Q14997 1843 aa17.63■□□□□ 0.41
RTFDC1-204ENST00000449062 ZKSCAN2Q63HK3 967 aa17.62■□□□□ 0.41
RTFDC1-204ENST00000449062 ZNF804AQ7Z570 1209 aa17.62■□□□□ 0.41
RTFDC1-204ENST00000449062 CLUAP1Q96AJ1 413 aa17.62■□□□□ 0.41
RTFDC1-204ENST00000449062 ZBED3Q96IU2 234 aaPredicted RBP17.62■□□□□ 0.41
RTFDC1-204ENST00000449062 HDAC5Q9UQL6 1122 aa17.62■□□□□ 0.41
RTFDC1-204ENST00000449062 MYO3BQ8WXR4 1341 aa17.62■□□□□ 0.41
RTFDC1-204ENST00000449062 CNTNAP1P78357 1384 aa17.62■□□□□ 0.41
RTFDC1-204ENST00000449062 GNAI3P08754 354 aa17.61■□□□□ 0.41
RTFDC1-204ENST00000449062 GYG1P46976 350 aa17.61■□□□□ 0.41
RTFDC1-204ENST00000449062 MTX1Q13505 466 aa17.61■□□□□ 0.41
RTFDC1-204ENST00000449062 FBXO3Q9UK99 471 aa17.61■□□□□ 0.41
RTFDC1-204ENST00000449062 FAM205AQ6ZU69 1335 aa17.61■□□□□ 0.41
RTFDC1-204ENST00000449062 ZNF646O15015 1829 aaPredicted RBP17.61■□□□□ 0.41
RTFDC1-204ENST00000449062 HIBADHP31937 336 aaKnown RBP17.6■□□□□ 0.41
RTFDC1-204ENST00000449062 VEGFBP49765 207 aa17.6■□□□□ 0.41
RTFDC1-204ENST00000449062 FKBP1AP62942 108 aaKnown RBP17.6■□□□□ 0.41
RTFDC1-204ENST00000449062 NBPF9Q3BBW0 867 aa17.6■□□□□ 0.41
RTFDC1-204ENST00000449062 METTL24Q5JXM2 366 aa17.6■□□□□ 0.41
RTFDC1-204ENST00000449062 KRT26Q7Z3Y9 468 aa17.6■□□□□ 0.41
RTFDC1-204ENST00000449062 TMEM57Q8N5G2 664 aa17.6■□□□□ 0.41
RTFDC1-204ENST00000449062 COPRSQ9NQ92 184 aa17.6■□□□□ 0.41
RTFDC1-204ENST00000449062 POLR2AP24928 1970 aaKnown RBP17.59■□□□□ 0.41
RTFDC1-204ENST00000449062 A0A1B0GUL6 1792 aa17.59■□□□□ 0.41
RTFDC1-204ENST00000449062 CIAO1O76071 339 aa17.59■□□□□ 0.41
RTFDC1-204ENST00000449062 RLBP1P12271 317 aa17.59■□□□□ 0.41
RTFDC1-204ENST00000449062 DEFB115Q30KQ5 88 aa17.59■□□□□ 0.41
RTFDC1-204ENST00000449062 DCPSQ96C86 337 aaKnown RBP17.59■□□□□ 0.41
RTFDC1-204ENST00000449062 TLL2Q9Y6L7 1015 aa17.59■□□□□ 0.41
RTFDC1-204ENST00000449062 WNT10BO00744 389 aa17.58■□□□□ 0.4
RTFDC1-204ENST00000449062 CELF2O95319 508 aaKnown RBP17.58■□□□□ 0.4
RTFDC1-204ENST00000449062 ANGEL2Q5VTE6 544 aaKnown RBP17.58■□□□□ 0.4
RTFDC1-204ENST00000449062 SAPCD2Q86UD0 394 aa17.58■□□□□ 0.4
RTFDC1-204ENST00000449062 KIAA0825Q8IV33 1275 aa17.58■□□□□ 0.4
RTFDC1-204ENST00000449062 OGFOD1Q8N543 542 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms