RNA–Protein interactions for RNA: ENST00000448246.1

SP4-204, Transcript of Sp4 transcription factor, humanhuman

TSL 5

Gene SP4, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-204ENST00000448246 LRRC2Q9BYS8 371 aa12.15□□□□□ -0.46
SP4-204ENST00000448246 CEP131Q9UPN4 1083 aa12.15□□□□□ -0.46
SP4-204ENST00000448246 KLF18A0A0U1RQI7 1052 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 PDE6BP35913 854 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 PRDM10Q9NQV6 1147 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 TNS3Q68CZ2 1445 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
SP4-204ENST00000448246 PPFIA3O75145 1194 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 NF2P35240 595 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 HOMER1Q86YM7 354 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 PPP1R9BQ96SB3 815 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.14□□□□□ -0.47
SP4-204ENST00000448246 PCCAP05165 728 aaPredicted RBP12.14□□□□□ -0.47
SP4-204ENST00000448246 TNMDQ9H2S6 317 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 C1orf167Q5SNV9 1468 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 LMOD1P29536 600 aaPredicted RBP12.14□□□□□ -0.47
SP4-204ENST00000448246 CTSWP56202 376 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 TNIP1Q15025 636 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
SP4-204ENST00000448246 CDK12Q9NYV4 1490 aaPredicted RBP12.13□□□□□ -0.47
SP4-204ENST00000448246 ZBTB43O43298 467 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 CCDC178Q5BJE1 867 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 BEND3Q5T5X7 828 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 IFIT1BQ5T764 474 aaKnown RBP12.13□□□□□ -0.47
SP4-204ENST00000448246 CCDC12Q8WUD4 166 aaPredicted RBP12.13□□□□□ -0.47
SP4-204ENST00000448246 TRPM1Q7Z4N2 1603 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 JCADQ9P266 1359 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 A0A0U1RQG5 324 aaPredicted RBP12.13□□□□□ -0.47
SP4-204ENST00000448246 PRAMEF22A3QJZ6 481 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 STIM1Q13586 685 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 PPP4R3BQ5MIZ7 849 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 WWC2Q6AWC2 1192 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 ABCA6Q8N139 1617 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 SETD1BQ9UPS6 1966 aaKnown RBP12.13□□□□□ -0.47
SP4-204ENST00000448246 TERF1P54274 439 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 LRSAM1Q6UWE0 723 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 TTC6Q86TZ1 520 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 MROH5Q6ZUA9 1318 aa12.13□□□□□ -0.47
SP4-204ENST00000448246 MBD4O95243 580 aa12.12□□□□□ -0.47
SP4-204ENST00000448246 TEX11Q8IYF3 940 aa12.12□□□□□ -0.47
SP4-204ENST00000448246 OTUD7AQ8TE49 926 aaPredicted RBP12.12□□□□□ -0.47
SP4-204ENST00000448246 ARHGEF40Q8TER5 1519 aa12.12□□□□□ -0.47
SP4-204ENST00000448246 E9PCH4 1651 aa12.12□□□□□ -0.47
SP4-204ENST00000448246 SUPT20HQ8NEM7 779 aa12.12□□□□□ -0.47
SP4-204ENST00000448246 SLC26A6Q9BXS9 759 aa12.12□□□□□ -0.47
SP4-204ENST00000448246 SCAND2PQ9GZW5 306 aaPredicted RBP12.12□□□□□ -0.47
SP4-204ENST00000448246 BCS1LQ9Y276 419 aa12.12□□□□□ -0.47
SP4-204ENST00000448246 KIDINS220Q9ULH0 1771 aa12.12□□□□□ -0.47
SP4-204ENST00000448246 ANAPC15P60006 121 aa12.12□□□□□ -0.47
SP4-204ENST00000448246 RBM6P78332 1123 aaKnown RBP12.12□□□□□ -0.47
SP4-204ENST00000448246 TRIM5Q9C035 493 aa12.12□□□□□ -0.47
SP4-204ENST00000448246 RBSNQ9H1K0 784 aa12.12□□□□□ -0.47
SP4-204ENST00000448246 MAGEC2Q9UBF1 373 aaPredicted RBP12.12□□□□□ -0.47
SP4-204ENST00000448246 CHMLP26374 656 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 ZNF445P59923 1031 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 FILIP1LQ4L180 1135 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 CROCC2H7BZ55 1655 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 CAMSAP1Q5T5Y3 1602 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 GNAQP50148 359 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 EIF6P56537 245 aaKnown RBP12.11□□□□□ -0.47
SP4-204ENST00000448246 CNKSR2Q8WXI2 1034 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 RAB34Q9BZG1 259 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 KDRP35968 1356 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 PPRC1Q5VV67 1664 aaKnown RBP12.11□□□□□ -0.47
SP4-204ENST00000448246 TNNI2P48788 182 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 GRM1Q13255 1194 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 ABCC4O15439 1325 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 TULP4Q9NRJ4 1543 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 CCDC192P0DO97 292 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 ZNF771Q7L3S4 317 aaPredicted RBP12.11□□□□□ -0.47
SP4-204ENST00000448246 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
SP4-204ENST00000448246 CCDC171Q6TFL3 1326 aa12.11□□□□□ -0.47
SP4-204ENST00000448246 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 ADAMTS13Q76LX8 1427 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 HSPA1LP34931 641 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 BRPF1P55201 1214 aaPredicted RBP12.1□□□□□ -0.47
SP4-204ENST00000448246 CEP57L1Q8IYX8 460 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 SSH3Q8TE77 659 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 PPIP5K2O43314 1243 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 C2CD5Q86YS7 1000 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 NECAB1Q8N987 351 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 PRC1O43663 620 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 CHMP4BP1P59074 171 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 TRAF1Q13077 416 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 PDILTQ8N807 584 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 APPBP2Q92624 585 aa12.1□□□□□ -0.47
SP4-204ENST00000448246 GJB2P29033 226 aa12.09□□□□□ -0.47
SP4-204ENST00000448246 RTN1Q16799 776 aa12.09□□□□□ -0.47
SP4-204ENST00000448246 KBTBD3Q8NAB2 608 aa12.09□□□□□ -0.47
SP4-204ENST00000448246 RAD50Q92878 1312 aa12.09□□□□□ -0.47
SP4-204ENST00000448246 CDC42BPGQ6DT37 1551 aa12.09□□□□□ -0.47
SP4-204ENST00000448246 USP31Q70CQ4 1352 aa12.09□□□□□ -0.47
SP4-204ENST00000448246 ZNF853P0CG23 659 aa12.09□□□□□ -0.47
SP4-204ENST00000448246 DHX8Q14562 1220 aaKnown RBP12.09□□□□□ -0.47
SP4-204ENST00000448246 NIM1KQ8IY84 436 aa12.09□□□□□ -0.47
SP4-204ENST00000448246 MAST3O60307 1309 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms