RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 MAP3K19Q56UN5 1328 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 RHPN1Q8TCX5 695 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 IFT74Q96LB3 600 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 AMOTL2Q9Y2J4 779 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 NDUFB9Q9Y6M9 179 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 INO80Q9ULG1 1556 aaPredicted RBP10.52□□□□□ -0.73
SMC6-207ENST00000448223 GJB2P29033 226 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 ZNF445P59923 1031 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 STX1AQ16623 288 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 PIK3R5Q8WYR1 880 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 PPP1R9BQ96SB3 815 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 BTBD11A6QL63 1104 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 CHL1O00533 1208 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 RIOK3O14730 519 aaKnown RBP10.51□□□□□ -0.73
SMC6-207ENST00000448223 RAB11FIP3O75154 756 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 EHBP1Q8NDI1 1231 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 SMC6Q96SB8 1091 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 SAMD15Q9P1V8 674 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 NRXN1Q9ULB1 1477 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 PTPRCP08575 1304 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 A6NNZ2 444 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 STX6O43752 255 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 AK2P54819 239 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 ZC3H6P61129 1189 aaKnown RBP10.51□□□□□ -0.73
SMC6-207ENST00000448223 MAP7Q14244 749 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 TUBB8Q3ZCM7 444 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 AMOTL1Q8IY63 956 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 TTC14Q96N46 770 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 NUP88Q99567 741 aaPredicted RBP10.51□□□□□ -0.73
SMC6-207ENST00000448223 SEPT11Q9NVA2 429 aaKnown RBP10.51□□□□□ -0.73
SMC6-207ENST00000448223 RABGAP1Q9Y3P9 1069 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 POGZQ7Z3K3 1410 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 CWF19L2Q2TBE0 894 aaKnown RBP10.51□□□□□ -0.73
SMC6-207ENST00000448223 KLHDC4Q8TBB5 520 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 LRRC59Q96AG4 307 aaKnown RBP10.51□□□□□ -0.73
SMC6-207ENST00000448223 DDX23Q9BUQ8 820 aaKnown RBP10.51□□□□□ -0.73
SMC6-207ENST00000448223 PPP1R12BO60237 982 aaPredicted RBP10.51□□□□□ -0.73
SMC6-207ENST00000448223 NBPF7P0C2Y1 421 aaPredicted RBP10.51□□□□□ -0.73
SMC6-207ENST00000448223 PIP4K2BP78356 416 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 RAB3IL1Q8TBN0 382 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 DEPDC5O75140 1603 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 MAP3K9P80192 1104 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 RAB11FIP4Q86YS3 637 aa10.51□□□□□ -0.73
SMC6-207ENST00000448223 CWC25Q9NXE8 425 aaPredicted RBP10.51□□□□□ -0.73
SMC6-207ENST00000448223 FAM135BQ49AJ0 1406 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 NCOA3Q9Y6Q9 1424 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 ADGRB1O14514 1584 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 LRRC23Q53EV4 343 aaPredicted RBP10.5□□□□□ -0.73
SMC6-207ENST00000448223 CCDC129Q6ZRS4 1044 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 JRKLQ9Y4A0 524 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 LRRC7Q96NW7 1537 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 GBP1P32455 592 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 CEP85LQ5SZL2 805 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 STMN2Q93045 179 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 ZBTB9Q96C00 473 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 KIF1BPQ96EK5 621 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 TRIM4Q9C037 500 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 CETN2P41208 172 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 SART3Q15020 963 aaKnown RBP10.5□□□□□ -0.73
SMC6-207ENST00000448223 WASHC4Q2M389 1173 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMC6-207ENST00000448223 LIMCH1Q9UPQ0 1083 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 RTL1A6NKG5 1358 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 UBE2HP62256 183 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 BLOC1S2Q6QNY1 142 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 GBP5Q96PP8 586 aa10.5□□□□□ -0.73
SMC6-207ENST00000448223 ATP8B2P98198 1209 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 WHAMMQ8TF30 809 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 NUCKS1Q9H1E3 243 aaKnown RBP10.49□□□□□ -0.73
SMC6-207ENST00000448223 PTCH1Q13635 1447 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 KRT18P05783 430 aaKnown RBP10.49□□□□□ -0.73
SMC6-207ENST00000448223 BIRC2Q13490 618 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 SETDB1Q15047 1291 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 PNMA8AQ86V59 439 aaPredicted RBP10.49□□□□□ -0.73
SMC6-207ENST00000448223 FAM200AQ8TCP9 573 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 VCX3BQ9H321 246 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 VWDEQ8N2E2 1590 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 ARAP3Q8WWN8 1544 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 FAM160A1Q05DH4 1040 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 TSPYL2Q9H2G4 693 aaPredicted RBP10.49□□□□□ -0.73
SMC6-207ENST00000448223 KCNQ3O43525 872 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 SYT1P21579 422 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 SLC39A6Q13433 755 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 KLHL10Q6JEL2 608 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 HOOK3Q86VS8 718 aa10.49□□□□□ -0.73
SMC6-207ENST00000448223 STMN4Q9H169 189 aaPredicted RBP10.49□□□□□ -0.73
SMC6-207ENST00000448223 AK9Q5TCS8 1911 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 ZBTB16Q05516 673 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 CCDC97Q96F63 343 aaPredicted RBP10.48□□□□□ -0.73
SMC6-207ENST00000448223 TPX2Q9ULW0 747 aaKnown RBP10.48□□□□□ -0.73
SMC6-207ENST00000448223 MAP3K2Q9Y2U5 619 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 YEATS2Q9ULM3 1422 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 CFAP74Q9C0B2 1584 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 CCDC196A0A1B0GTZ2 297 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 A0A1W2PRG0 241 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 CASQ2O14958 399 aaPredicted RBP10.48□□□□□ -0.73
SMC6-207ENST00000448223 CETN3O15182 167 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 CCDC174Q6PII3 467 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 LGR6Q9HBX8 967 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 ABCC3O15438 1527 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms