RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 G3BP1Q13283 466 aaKnown RBP eCLIP16.23■□□□□ 0.19
ERGIC3-209ENST00000447986 UBE4AQ14139 1066 aa16.23■□□□□ 0.19
ERGIC3-209ENST00000447986 GPR101Q96P66 508 aaPredicted RBP16.23■□□□□ 0.19
ERGIC3-209ENST00000447986 CEP126Q9P2H0 1117 aa16.23■□□□□ 0.19
ERGIC3-209ENST00000447986 DICER1Q9UPY3 1922 aaKnown RBP16.22■□□□□ 0.19
ERGIC3-209ENST00000447986 GLTPD2A6NH11 291 aa16.22■□□□□ 0.19
ERGIC3-209ENST00000447986 ECE2O60344 883 aa16.21■□□□□ 0.19
ERGIC3-209ENST00000447986 ATG9AQ7Z3C6 839 aa16.21■□□□□ 0.19
ERGIC3-209ENST00000447986 DBNDD1Q9H9R9 158 aa16.21■□□□□ 0.19
ERGIC3-209ENST00000447986 GPBP1L1Q9HC44 474 aaPredicted RBP16.21■□□□□ 0.19
ERGIC3-209ENST00000447986 IFIT1P09914 478 aaKnown RBP16.2■□□□□ 0.18
ERGIC3-209ENST00000447986 OS9Q13438 667 aaPredicted RBP16.2■□□□□ 0.18
ERGIC3-209ENST00000447986 TNIP1Q15025 636 aa16.2■□□□□ 0.18
ERGIC3-209ENST00000447986 PUM3Q15397 648 aaKnown RBP16.2■□□□□ 0.18
ERGIC3-209ENST00000447986 DOK7Q18PE1 504 aa16.2■□□□□ 0.18
ERGIC3-209ENST00000447986 C15orf52Q6ZUT6 534 aaKnown RBP16.2■□□□□ 0.18
ERGIC3-209ENST00000447986 ZNF804AQ7Z570 1209 aa16.2■□□□□ 0.18
ERGIC3-209ENST00000447986 PODNQ7Z5L7 613 aa16.2■□□□□ 0.18
ERGIC3-209ENST00000447986 ZNF526Q8TF50 670 aaPredicted RBP16.2■□□□□ 0.18
ERGIC3-209ENST00000447986 COA1Q9GZY4 146 aa16.2■□□□□ 0.18
ERGIC3-209ENST00000447986 SURF6O75683 361 aaKnown RBP16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 AAMPQ13685 434 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 GPC2Q8N158 579 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 VGLL2Q8N8G2 317 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 ZNF784Q8NCA9 323 aaPredicted RBP16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 CRBNQ96SW2 442 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 WTIPA6NIX2 430 aaPredicted RBP16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 SNAP23O00161 211 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 SLC5A1P13866 664 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 HSP90AB4PQ58FF6 505 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 CAVIN4Q5BKX8 364 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 CIAPIN1Q6FI81 312 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 AKAP2Q9Y2D5 859 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 COL4A5P29400 1685 aa16.19■□□□□ 0.18
ERGIC3-209ENST00000447986 DDNO94850 711 aaPredicted RBP16.18■□□□□ 0.18
ERGIC3-209ENST00000447986 PRKCSHP14314 528 aaPredicted RBP16.18■□□□□ 0.18
ERGIC3-209ENST00000447986 VPS37DQ86XT2 251 aa16.18■□□□□ 0.18
ERGIC3-209ENST00000447986 LPIN2Q92539 896 aa16.18■□□□□ 0.18
ERGIC3-209ENST00000447986 GJA3Q9Y6H8 435 aa16.18■□□□□ 0.18
ERGIC3-209ENST00000447986 RAD17O75943 681 aa16.17■□□□□ 0.18
ERGIC3-209ENST00000447986 CXCL9Q07325 125 aa16.17■□□□□ 0.18
ERGIC3-209ENST00000447986 ATP2B3Q16720 1220 aa16.17■□□□□ 0.18
ERGIC3-209ENST00000447986 TXNRD3Q86VQ6 643 aa16.17■□□□□ 0.18
ERGIC3-209ENST00000447986 ERC1Q8IUD2 1116 aa16.17■□□□□ 0.18
ERGIC3-209ENST00000447986 NOP58Q9Y2X3 529 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-209ENST00000447986 A0A1B0GUL6 1792 aa16.16■□□□□ 0.18
ERGIC3-209ENST00000447986 YDJCA8MPS7 323 aa16.16■□□□□ 0.18
ERGIC3-209ENST00000447986 KLRK1P26718 216 aa16.16■□□□□ 0.18
ERGIC3-209ENST00000447986 IQCA1LA6NCM1 817 aa16.16■□□□□ 0.18
ERGIC3-209ENST00000447986 CENPBP07199 599 aaPredicted RBP16.16■□□□□ 0.18
ERGIC3-209ENST00000447986 FGFR2P21802 821 aa16.16■□□□□ 0.18
ERGIC3-209ENST00000447986 HIBADHP31937 336 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-209ENST00000447986 TFCP2Q12800 502 aa16.16■□□□□ 0.18
ERGIC3-209ENST00000447986 CD209Q9NNX6 404 aa16.16■□□□□ 0.18
ERGIC3-209ENST00000447986 IRS2Q9Y4H2 1338 aa16.15■□□□□ 0.18
ERGIC3-209ENST00000447986 USP17L3A6NCW0 530 aa16.15■□□□□ 0.18
ERGIC3-209ENST00000447986 USP17L4A6NCW7 530 aa16.15■□□□□ 0.18
ERGIC3-209ENST00000447986 VEGFAP15692 232 aaPredicted RBP16.15■□□□□ 0.18
ERGIC3-209ENST00000447986 LMOD1P29536 600 aaPredicted RBP16.15■□□□□ 0.18
ERGIC3-209ENST00000447986 USP17L1Q7RTZ2 530 aa16.15■□□□□ 0.18
ERGIC3-209ENST00000447986 L3MBTL3Q96JM7 780 aaPredicted RBP16.15■□□□□ 0.18
ERGIC3-209ENST00000447986 GYG1P46976 350 aa16.14■□□□□ 0.17
ERGIC3-209ENST00000447986 FBXW7Q969H0 707 aa16.14■□□□□ 0.17
ERGIC3-209ENST00000447986 FAM84BQ96KN1 310 aaPredicted RBP16.14■□□□□ 0.17
ERGIC3-209ENST00000447986 RRAGCQ9HB90 399 aa16.14■□□□□ 0.17
ERGIC3-209ENST00000447986 EXOC6BQ9Y2D4 811 aa16.14■□□□□ 0.17
ERGIC3-209ENST00000447986 PSMD14O00487 310 aa16.13■□□□□ 0.17
ERGIC3-209ENST00000447986 FRAT2O75474 233 aaPredicted RBP16.13■□□□□ 0.17
ERGIC3-209ENST00000447986 SASH1O94885 1247 aa16.13■□□□□ 0.17
ERGIC3-209ENST00000447986 IL1R1P14778 569 aa16.13■□□□□ 0.17
ERGIC3-209ENST00000447986 STRIP1Q5VSL9 837 aa16.13■□□□□ 0.17
ERGIC3-209ENST00000447986 SIRT2Q8IXJ6 389 aa16.13■□□□□ 0.17
ERGIC3-209ENST00000447986 C16orf71Q8IYS4 520 aaPredicted RBP16.13■□□□□ 0.17
ERGIC3-209ENST00000447986 A0A1B0GUL7 405 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 RAB11FIP3O75154 756 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 RPS12P25398 132 aaKnown RBP16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 NEUROD6Q96NK8 337 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 NMRK2Q9NPI5 230 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 GPR108Q9NPR9 543 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 GNL3LQ9NVN8 582 aaKnown RBP16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 HACL1Q9UJ83 578 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 MYO3BQ8WXR4 1341 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 WDR90Q96KV7 1748 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 VIL1P09327 827 aaKnown RBP16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 GORABQ5T7V8 394 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 TTLL5Q6EMB2 1281 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 FBXO33Q7Z6M2 555 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 KIF1BPQ96EK5 621 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 KCNQ5Q9NR82 932 aa16.12■□□□□ 0.17
ERGIC3-209ENST00000447986 GMPSP49915 693 aaPredicted RBP16.11■□□□□ 0.17
ERGIC3-209ENST00000447986 BCAMP50895 628 aa16.11■□□□□ 0.17
ERGIC3-209ENST00000447986 TIMM10P62072 90 aa16.11■□□□□ 0.17
ERGIC3-209ENST00000447986 GTF2IP78347 998 aa16.11■□□□□ 0.17
ERGIC3-209ENST00000447986 RSBN1LQ6PCB5 846 aaPredicted RBP16.11■□□□□ 0.17
ERGIC3-209ENST00000447986 AGBL3Q8NEM8 1001 aa16.11■□□□□ 0.17
ERGIC3-209ENST00000447986 TDRD7Q8NHU6 1098 aaKnown RBP16.11■□□□□ 0.17
ERGIC3-209ENST00000447986 EXOC6Q8TAG9 804 aa16.11■□□□□ 0.17
ERGIC3-209ENST00000447986 SCNN1DP51172 638 aa16.1■□□□□ 0.17
ERGIC3-209ENST00000447986 TNNI3KQ59H18 835 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms