RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 CACNA1SQ13698 1873 aa30.19■■■□□ 2.42
RFFL-206ENST00000447669 KCNJ4P48050 445 aa30.19■■■□□ 2.42
RFFL-206ENST00000447669 C2CD5Q86YS7 1000 aa30.19■■■□□ 2.42
RFFL-206ENST00000447669 ZNF622Q969S3 477 aaKnown RBP eCLIP30.19■■■□□ 2.42
RFFL-206ENST00000447669 FAM227BQ96M60 508 aa30.19■■■□□ 2.42
RFFL-206ENST00000447669 GPSM2P81274 684 aa30.18■■■□□ 2.42
RFFL-206ENST00000447669 UBE4AQ14139 1066 aa30.18■■■□□ 2.42
RFFL-206ENST00000447669 TXNRD3Q86VQ6 643 aa30.18■■■□□ 2.42
RFFL-206ENST00000447669 UPF2Q9HAU5 1272 aaKnown RBP30.18■■■□□ 2.42
RFFL-206ENST00000447669 ANKRD2Q9GZV1 360 aa30.18■■■□□ 2.42
RFFL-206ENST00000447669 NPR1P16066 1061 aa30.17■■■□□ 2.42
RFFL-206ENST00000447669 SLC16A10Q8TF71 515 aa30.17■■■□□ 2.42
RFFL-206ENST00000447669 TBC1D32Q96NH3 1257 aa30.17■■■□□ 2.42
RFFL-206ENST00000447669 C22orf23Q9BZE7 217 aa30.17■■■□□ 2.42
RFFL-206ENST00000447669 DIAPH3Q9NSV4 1193 aa30.17■■■□□ 2.42
RFFL-206ENST00000447669 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.17■■■□□ 2.42
RFFL-206ENST00000447669 NSFL1CQ9UNZ2 370 aaKnown RBP30.17■■■□□ 2.42
RFFL-206ENST00000447669 MYO5AQ9Y4I1 1855 aaKnown RBP30.16■■■□□ 2.42
RFFL-206ENST00000447669 ZNF804BA4D1E1 1349 aa30.16■■■□□ 2.42
RFFL-206ENST00000447669 BBOX1O75936 387 aa30.16■■■□□ 2.42
RFFL-206ENST00000447669 ARID4AP29374 1257 aaPredicted RBP30.16■■■□□ 2.42
RFFL-206ENST00000447669 NMIQ13287 307 aaPredicted RBP30.15■■■□□ 2.42
RFFL-206ENST00000447669 RASGRF1Q13972 1273 aa30.15■■■□□ 2.42
RFFL-206ENST00000447669 PPEF1O14829 653 aaPredicted RBP30.15■■■□□ 2.42
RFFL-206ENST00000447669 ILDR2Q71H61 639 aa30.15■■■□□ 2.42
RFFL-206ENST00000447669 MASTLQ96GX5 879 aa30.15■■■□□ 2.42
RFFL-206ENST00000447669 FAM84BQ96KN1 310 aaPredicted RBP30.15■■■□□ 2.42
RFFL-206ENST00000447669 HMG20BQ9P0W2 317 aa30.15■■■□□ 2.42
RFFL-206ENST00000447669 A0A0D9SFI3 127 aa30.14■■■□□ 2.42
RFFL-206ENST00000447669 KBTBD3Q8NAB2 608 aa30.14■■■□□ 2.42
RFFL-206ENST00000447669 CYP2E1P05181 493 aaPredicted RBP30.13■■■□□ 2.41
RFFL-206ENST00000447669 H0YIN7 160 aa30.13■■■□□ 2.41
RFFL-206ENST00000447669 ZNF512BQ96KM6 892 aaPredicted RBP30.13■■■□□ 2.41
RFFL-206ENST00000447669 USP26Q9BXU7 913 aa30.13■■■□□ 2.41
RFFL-206ENST00000447669 SGSM2O43147 1006 aa30.12■■■□□ 2.41
RFFL-206ENST00000447669 XDHP47989 1333 aa30.12■■■□□ 2.41
RFFL-206ENST00000447669 SEC62Q99442 399 aaKnown RBP30.12■■■□□ 2.41
RFFL-206ENST00000447669 ANO2Q9NQ90 1003 aa30.12■■■□□ 2.41
RFFL-206ENST00000447669 ZNF219Q9P2Y4 722 aaPredicted RBP30.12■■■□□ 2.41
RFFL-206ENST00000447669 UQCRFS1P1P0C7P4 283 aa30.11■■■□□ 2.41
RFFL-206ENST00000447669 SPATA5Q8NB90 893 aa30.11■■■□□ 2.41
RFFL-206ENST00000447669 PIH1D3Q9NQM4 214 aaKnown RBP30.11■■■□□ 2.41
RFFL-206ENST00000447669 ALDH1B1P30837 517 aa30.1■■■□□ 2.41
RFFL-206ENST00000447669 VPS37DQ86XT2 251 aa30.1■■■□□ 2.41
RFFL-206ENST00000447669 IRS2Q9Y4H2 1338 aa30.09■■■□□ 2.41
RFFL-206ENST00000447669 SLX4Q8IY92 1834 aa30.09■■■□□ 2.41
RFFL-206ENST00000447669 CAVIN4Q5BKX8 364 aa30.09■■■□□ 2.41
RFFL-206ENST00000447669 POLLQ9UGP5 575 aa30.09■■■□□ 2.41
RFFL-206ENST00000447669 ATP6V0A2Q9Y487 856 aa30.09■■■□□ 2.41
RFFL-206ENST00000447669 UFL1O94874 794 aa30.08■■■□□ 2.41
RFFL-206ENST00000447669 SP8Q8IXZ3 490 aa30.08■■■□□ 2.41
RFFL-206ENST00000447669 FBXO33Q7Z6M2 555 aa30.08■■■□□ 2.41
RFFL-206ENST00000447669 REC8O95072 547 aa30.07■■■□□ 2.4
RFFL-206ENST00000447669 CCDC129Q6ZRS4 1044 aa30.07■■■□□ 2.4
RFFL-206ENST00000447669 ZNF589Q86UQ0 364 aaPredicted RBP30.07■■■□□ 2.4
RFFL-206ENST00000447669 MTFR1LQ9H019 292 aa30.07■■■□□ 2.4
RFFL-206ENST00000447669 LEMD3Q9Y2U8 911 aa30.07■■■□□ 2.4
RFFL-206ENST00000447669 COL1A1P02452 1464 aaPredicted RBP30.07■■■□□ 2.4
RFFL-206ENST00000447669 C10orf71Q711Q0 1435 aa30.07■■■□□ 2.4
RFFL-206ENST00000447669 A0A0G2JLW4 131 aa30.06■■■□□ 2.4
RFFL-206ENST00000447669 JAG2Q9Y219 1238 aa30.06■■■□□ 2.4
RFFL-206ENST00000447669 LRRC37AA6NMS7 1700 aa30.06■■■□□ 2.4
RFFL-206ENST00000447669 ANP32AP39687 249 aaKnown RBP30.06■■■□□ 2.4
RFFL-206ENST00000447669 PRPF40BQ6NWY9 871 aaKnown RBP30.06■■■□□ 2.4
RFFL-206ENST00000447669 GGA1Q9UJY5 639 aa30.06■■■□□ 2.4
RFFL-206ENST00000447669 WWC3Q9ULE0 1092 aa30.06■■■□□ 2.4
RFFL-206ENST00000447669 HIBADHP31937 336 aaKnown RBP30.05■■■□□ 2.4
RFFL-206ENST00000447669 TBC1D16Q8TBP0 767 aa30.05■■■□□ 2.4
RFFL-206ENST00000447669 PTH1RQ03431 593 aa30.05■■■□□ 2.4
RFFL-206ENST00000447669 STYK1Q6J9G0 422 aa30.05■■■□□ 2.4
RFFL-206ENST00000447669 HIP1O00291 1037 aa30.04■■■□□ 2.4
RFFL-206ENST00000447669 IDH1O75874 414 aaKnown RBP30.04■■■□□ 2.4
RFFL-206ENST00000447669 RBM25P49756 843 aaKnown RBP30.04■■■□□ 2.4
RFFL-206ENST00000447669 RUFY2Q8WXA3 655 aa30.04■■■□□ 2.4
RFFL-206ENST00000447669 SRCAPQ6ZRS2 3230 aa30.04■■■□□ 2.4
RFFL-206ENST00000447669 C6orf229H3BNL8 230 aa30.03■■■□□ 2.4
RFFL-206ENST00000447669 LSG1Q9H089 658 aaKnown RBP30.03■■■□□ 2.4
RFFL-206ENST00000447669 PODXL2Q9NZ53 605 aa30.03■■■□□ 2.4
RFFL-206ENST00000447669 LTBP1Q14766 1721 aa30.03■■■□□ 2.4
RFFL-206ENST00000447669 RNF113AO15541 343 aaKnown RBP30.02■■■□□ 2.4
RFFL-206ENST00000447669 FRAT2O75474 233 aaPredicted RBP30.02■■■□□ 2.4
RFFL-206ENST00000447669 ATP2B4P23634 1241 aa30.02■■■□□ 2.4
RFFL-206ENST00000447669 KIF2CQ99661 725 aa30.02■■■□□ 2.4
RFFL-206ENST00000447669 GNL3LQ9NVN8 582 aaKnown RBP30.02■■■□□ 2.4
RFFL-206ENST00000447669 PPP1R1BQ9UD71 204 aaPredicted RBP30.02■■■□□ 2.4
RFFL-206ENST00000447669 MYH7P12883 1935 aa30.02■■■□□ 2.4
RFFL-206ENST00000447669 DPEP1P16444 411 aa30.01■■■□□ 2.4
RFFL-206ENST00000447669 RIMBP2O15034 1052 aa30■■■□□ 2.39
RFFL-206ENST00000447669 KCNA3P22001 575 aa30■■■□□ 2.39
RFFL-206ENST00000447669 TMC4Q7Z404 712 aa30■■■□□ 2.39
RFFL-206ENST00000447669 MPNDQ8N594 471 aa30■■■□□ 2.39
RFFL-206ENST00000447669 MYH13Q9UKX3 1938 aa30■■■□□ 2.39
RFFL-206ENST00000447669 POLD1P28340 1107 aa30■■■□□ 2.39
RFFL-206ENST00000447669 CHAF1AQ13111 956 aaPredicted RBP30■■■□□ 2.39
RFFL-206ENST00000447669 OSBP2Q969R2 916 aa30■■■□□ 2.39
RFFL-206ENST00000447669 TTF1Q15361 905 aaPredicted RBP29.99■■■□□ 2.39
RFFL-206ENST00000447669 ZMYM1Q5SVZ6 1142 aa29.99■■■□□ 2.39
RFFL-206ENST00000447669 SLC9C2Q5TAH2 1124 aa29.99■■■□□ 2.39
RFFL-206ENST00000447669 ABCF2Q9UG63 623 aa29.99■■■□□ 2.39
RFFL-206ENST00000447669 RFX7Q2KHR2 1363 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms