RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 AKAP2Q9Y2D5 859 aa22.15■■□□□ 1.14
TRAPPC4-203ENST00000447216 SBF1O95248 1867 aa22.14■■□□□ 1.13
TRAPPC4-203ENST00000447216 SLC5A1P13866 664 aa22.14■■□□□ 1.13
TRAPPC4-203ENST00000447216 CHD1LQ86WJ1 897 aa22.14■■□□□ 1.13
TRAPPC4-203ENST00000447216 TLR7Q9NYK1 1049 aaKnown RBP22.14■■□□□ 1.13
TRAPPC4-203ENST00000447216 MYH13Q9UKX3 1938 aa22.14■■□□□ 1.13
TRAPPC4-203ENST00000447216 NFKBIEO00221 500 aa22.13■■□□□ 1.13
TRAPPC4-203ENST00000447216 LPIN2Q92539 896 aa22.13■■□□□ 1.13
TRAPPC4-203ENST00000447216 DBNDD2Q9BQY9 259 aa22.13■■□□□ 1.13
TRAPPC4-203ENST00000447216 CHD4Q14839 1912 aa22.13■■□□□ 1.13
TRAPPC4-203ENST00000447216 RIMBP2O15034 1052 aa22.12■■□□□ 1.13
TRAPPC4-203ENST00000447216 IFIT1P09914 478 aaKnown RBP22.12■■□□□ 1.13
TRAPPC4-203ENST00000447216 RASSF7Q02833 373 aa22.12■■□□□ 1.13
TRAPPC4-203ENST00000447216 GPR162Q16538 588 aa22.12■■□□□ 1.13
TRAPPC4-203ENST00000447216 ARHGAP27Q6ZUM4 889 aa22.12■■□□□ 1.13
TRAPPC4-203ENST00000447216 TXNRD3Q86VQ6 643 aa22.12■■□□□ 1.13
TRAPPC4-203ENST00000447216 SKAP1Q86WV1 359 aa22.12■■□□□ 1.13
TRAPPC4-203ENST00000447216 OTUD7AQ8TE49 926 aaPredicted RBP22.12■■□□□ 1.13
TRAPPC4-203ENST00000447216 RTFDC1Q9BY42 306 aaPredicted RBP22.12■■□□□ 1.13
TRAPPC4-203ENST00000447216 IRS2Q9Y4H2 1338 aa22.11■■□□□ 1.13
TRAPPC4-203ENST00000447216 IFIT2P09913 472 aaKnown RBP22.11■■□□□ 1.13
TRAPPC4-203ENST00000447216 FKBP4Q02790 459 aaKnown RBP eCLIP22.11■■□□□ 1.13
TRAPPC4-203ENST00000447216 GRIPAP1Q4V328 841 aa22.11■■□□□ 1.13
TRAPPC4-203ENST00000447216 XAGE2Q96GT9 111 aa22.11■■□□□ 1.13
TRAPPC4-203ENST00000447216 ZNF277Q9NRM2 450 aaPredicted RBP22.11■■□□□ 1.13
TRAPPC4-203ENST00000447216 DBNLQ9UJU6 430 aaKnown RBP22.11■■□□□ 1.13
TRAPPC4-203ENST00000447216 GYG1P46976 350 aa22.1■■□□□ 1.13
TRAPPC4-203ENST00000447216 PSMD1Q99460 953 aa22.1■■□□□ 1.13
TRAPPC4-203ENST00000447216 PDE4AP27815 886 aa22.09■■□□□ 1.13
TRAPPC4-203ENST00000447216 SUPT20HQ8NEM7 779 aa22.09■■□□□ 1.13
TRAPPC4-203ENST00000447216 TAOK3Q9H2K8 898 aa22.09■■□□□ 1.13
TRAPPC4-203ENST00000447216 DICER1Q9UPY3 1922 aaKnown RBP22.09■■□□□ 1.13
TRAPPC4-203ENST00000447216 MED23Q9ULK4 1368 aa22.09■■□□□ 1.13
TRAPPC4-203ENST00000447216 BCAMP50895 628 aa22.08■■□□□ 1.13
TRAPPC4-203ENST00000447216 AOC3Q16853 763 aa22.08■■□□□ 1.13
TRAPPC4-203ENST00000447216 WASHC4Q2M389 1173 aa22.08■■□□□ 1.13
TRAPPC4-203ENST00000447216 GORABQ5T7V8 394 aa22.08■■□□□ 1.13
TRAPPC4-203ENST00000447216 EYA3Q99504 573 aa22.08■■□□□ 1.13
TRAPPC4-203ENST00000447216 AKAP11Q9UKA4 1901 aa22.08■■□□□ 1.12
TRAPPC4-203ENST00000447216 PPIP5K2O43314 1243 aa22.07■■□□□ 1.12
TRAPPC4-203ENST00000447216 PHKA1P46020 1223 aa22.07■■□□□ 1.12
TRAPPC4-203ENST00000447216 TSHZ3Q63HK5 1081 aa22.07■■□□□ 1.12
TRAPPC4-203ENST00000447216 C15orf52Q6ZUT6 534 aaKnown RBP22.07■■□□□ 1.12
TRAPPC4-203ENST00000447216 FAM84BQ96KN1 310 aaPredicted RBP22.07■■□□□ 1.12
TRAPPC4-203ENST00000447216 ZC3H12CQ9C0D7 883 aaKnown RBP22.07■■□□□ 1.12
TRAPPC4-203ENST00000447216 COL4A5P29400 1685 aa22.07■■□□□ 1.12
TRAPPC4-203ENST00000447216 SCN9AQ15858 1988 aa22.07■■□□□ 1.12
TRAPPC4-203ENST00000447216 PRELPP51888 382 aa22.06■■□□□ 1.12
TRAPPC4-203ENST00000447216 DOK7Q18PE1 504 aa22.06■■□□□ 1.12
TRAPPC4-203ENST00000447216 LTBP3Q9NS15 1303 aa22.06■■□□□ 1.12
TRAPPC4-203ENST00000447216 HIBADHP31937 336 aaKnown RBP22.05■■□□□ 1.12
TRAPPC4-203ENST00000447216 IARSP41252 1262 aaKnown RBP22.05■■□□□ 1.12
TRAPPC4-203ENST00000447216 KIAA2012Q0VF49 1180 aa22.05■■□□□ 1.12
TRAPPC4-203ENST00000447216 CAVIN4Q5BKX8 364 aa22.05■■□□□ 1.12
TRAPPC4-203ENST00000447216 CCDC102BQ68D86 513 aa22.05■■□□□ 1.12
TRAPPC4-203ENST00000447216 FBXO33Q7Z6M2 555 aa22.05■■□□□ 1.12
TRAPPC4-203ENST00000447216 IQSEC3Q9UPP2 1182 aaPredicted RBP22.05■■□□□ 1.12
TRAPPC4-203ENST00000447216 SALL3Q9BXA9 1300 aa22.05■■□□□ 1.12
TRAPPC4-203ENST00000447216 ZNF804AQ7Z570 1209 aa22.04■■□□□ 1.12
TRAPPC4-203ENST00000447216 LARGE2Q8N3Y3 721 aa22.04■■□□□ 1.12
TRAPPC4-203ENST00000447216 DBNDD1Q9H9R9 158 aa22.04■■□□□ 1.12
TRAPPC4-203ENST00000447216 MYO5AQ9Y4I1 1855 aaKnown RBP22.04■■□□□ 1.12
TRAPPC4-203ENST00000447216 MX1P20591 662 aa22.03■■□□□ 1.12
TRAPPC4-203ENST00000447216 TTC39AQ5SRH9 613 aa22.03■■□□□ 1.12
TRAPPC4-203ENST00000447216 VPS37DQ86XT2 251 aa22.03■■□□□ 1.12
TRAPPC4-203ENST00000447216 PLEKHM2Q8IWE5 1019 aa22.03■■□□□ 1.12
TRAPPC4-203ENST00000447216 PSME4Q14997 1843 aa22.02■■□□□ 1.12
TRAPPC4-203ENST00000447216 G3V3G9 751 aa22.02■■□□□ 1.12
TRAPPC4-203ENST00000447216 CCDC158Q5M9N0 1113 aa22.02■■□□□ 1.12
TRAPPC4-203ENST00000447216 DCAF8Q5TAQ9 597 aa22.02■■□□□ 1.12
TRAPPC4-203ENST00000447216 CD209Q9NNX6 404 aa22.02■■□□□ 1.12
TRAPPC4-203ENST00000447216 ECE2O60344 883 aa22.01■■□□□ 1.11
TRAPPC4-203ENST00000447216 GRIN3BO60391 1043 aa22.01■■□□□ 1.11
TRAPPC4-203ENST00000447216 RGS3P49796 1198 aa22.01■■□□□ 1.11
TRAPPC4-203ENST00000447216 PDE1AP54750 535 aa22.01■■□□□ 1.11
TRAPPC4-203ENST00000447216 SCARF1Q14162 830 aa22.01■■□□□ 1.11
TRAPPC4-203ENST00000447216 GPATCH3Q96I76 525 aa22.01■■□□□ 1.11
TRAPPC4-203ENST00000447216 ECHDC1Q9NTX5 307 aa22.01■■□□□ 1.11
TRAPPC4-203ENST00000447216 ZNF646O15015 1829 aaPredicted RBP22.01■■□□□ 1.11
TRAPPC4-203ENST00000447216 TIAM2Q8IVF5 1701 aa22■■□□□ 1.11
TRAPPC4-203ENST00000447216 AK9Q5TCS8 1911 aa22■■□□□ 1.11
TRAPPC4-203ENST00000447216 COA1Q9GZY4 146 aa22■■□□□ 1.11
TRAPPC4-203ENST00000447216 VPS33BQ9H267 617 aa22■■□□□ 1.11
TRAPPC4-203ENST00000447216 STAP2Q9UGK3 403 aa22■■□□□ 1.11
TRAPPC4-203ENST00000447216 COL1A1P02452 1464 aaPredicted RBP22■■□□□ 1.11
TRAPPC4-203ENST00000447216 LMNB1P20700 586 aa21.99■■□□□ 1.11
TRAPPC4-203ENST00000447216 ARID4AP29374 1257 aaPredicted RBP21.99■■□□□ 1.11
TRAPPC4-203ENST00000447216 PI16Q6UXB8 463 aa21.99■■□□□ 1.11
TRAPPC4-203ENST00000447216 NIM1KQ8IY84 436 aa21.99■■□□□ 1.11
TRAPPC4-203ENST00000447216 TDRD7Q8NHU6 1098 aaKnown RBP21.99■■□□□ 1.11
TRAPPC4-203ENST00000447216 SNRKQ9NRH2 765 aa21.99■■□□□ 1.11
TRAPPC4-203ENST00000447216 GNL3LQ9NVN8 582 aaKnown RBP21.99■■□□□ 1.11
TRAPPC4-203ENST00000447216 JAG2Q9Y219 1238 aa21.99■■□□□ 1.11
TRAPPC4-203ENST00000447216 NDUFB9Q9Y6M9 179 aa21.99■■□□□ 1.11
TRAPPC4-203ENST00000447216 FRAT2O75474 233 aaPredicted RBP21.98■■□□□ 1.11
TRAPPC4-203ENST00000447216 UQCRFS1P1P0C7P4 283 aa21.98■■□□□ 1.11
TRAPPC4-203ENST00000447216 IL1R1P14778 569 aa21.98■■□□□ 1.11
TRAPPC4-203ENST00000447216 MCAMP43121 646 aa21.98■■□□□ 1.11
TRAPPC4-203ENST00000447216 RASGRF1Q13972 1273 aa21.98■■□□□ 1.11
TRAPPC4-203ENST00000447216 PI4K2BQ8TCG2 481 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 432 ms