RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 KRTAP9-2Q9BYQ4 174 aa7.89□□□□□ -1.15
LINC00440-201ENST00000446579 RNF112Q9ULX5 631 aa7.89□□□□□ -1.15
LINC00440-201ENST00000446579 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.88□□□□□ -1.15
LINC00440-201ENST00000446579 ABL1P00519 1130 aa7.88□□□□□ -1.15
LINC00440-201ENST00000446579 MZF1P28698 734 aaPredicted RBP7.88□□□□□ -1.15
LINC00440-201ENST00000446579 TTC39BQ5VTQ0 682 aaPredicted RBP7.88□□□□□ -1.15
LINC00440-201ENST00000446579 PDE12Q6L8Q7 609 aaKnown RBP7.88□□□□□ -1.15
LINC00440-201ENST00000446579 EDEM1Q92611 657 aa7.88□□□□□ -1.15
LINC00440-201ENST00000446579 TRIM33Q9UPN9 1127 aa7.88□□□□□ -1.15
LINC00440-201ENST00000446579 UNCXA6NJT0 531 aa7.87□□□□□ -1.15
LINC00440-201ENST00000446579 F8W735 103 aaPredicted RBP7.87□□□□□ -1.15
LINC00440-201ENST00000446579 GLB1P16278 677 aa7.87□□□□□ -1.15
LINC00440-201ENST00000446579 DNM1Q05193 864 aaKnown RBP7.87□□□□□ -1.15
LINC00440-201ENST00000446579 MTMR3Q13615 1198 aa7.87□□□□□ -1.15
LINC00440-201ENST00000446579 AGGF1Q8N302 714 aaeCLIP7.87□□□□□ -1.15
LINC00440-201ENST00000446579 OR13H1Q8NG92 308 aa7.87□□□□□ -1.15
LINC00440-201ENST00000446579 DCAF11Q8TEB1 546 aa7.87□□□□□ -1.15
LINC00440-201ENST00000446579 PDGFAP04085 211 aa7.86□□□□□ -1.15
LINC00440-201ENST00000446579 AAMPQ13685 434 aa7.86□□□□□ -1.15
LINC00440-201ENST00000446579 DZIP1LQ8IYY4 767 aaKnown RBP7.86□□□□□ -1.15
LINC00440-201ENST00000446579 SPACA7Q96KW9 195 aa7.86□□□□□ -1.15
LINC00440-201ENST00000446579 SRA1Q9HD15 236 aaKnown RBP7.86□□□□□ -1.15
LINC00440-201ENST00000446579 PCMTD2Q9NV79 361 aa7.86□□□□□ -1.15
LINC00440-201ENST00000446579 ABI2Q9NYB9 513 aaPredicted RBP7.86□□□□□ -1.15
LINC00440-201ENST00000446579 KRTAP9-6A0A140TA67 174 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 ICMTO60725 284 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 FSTP19883 344 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 CDC25BP30305 580 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 SETDB1Q15047 1291 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 XKR5Q6UX68 686 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 ZNF438Q7Z4V0 828 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 MAP4K3Q8IVH8 894 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 TMEM130Q8N3G9 435 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 LACRTQ9GZZ8 138 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 ELP3Q9H9T3 547 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 PPME1Q9Y570 386 aa7.85□□□□□ -1.15
LINC00440-201ENST00000446579 LINC01387J3KSC0 135 aa7.84□□□□□ -1.15
LINC00440-201ENST00000446579 SSTR4P31391 388 aa7.84□□□□□ -1.15
LINC00440-201ENST00000446579 USP5P45974 858 aa7.84□□□□□ -1.15
LINC00440-201ENST00000446579 HYAL2Q12891 473 aa7.84□□□□□ -1.15
LINC00440-201ENST00000446579 ZNF211Q13398 564 aaPredicted RBP7.84□□□□□ -1.15
LINC00440-201ENST00000446579 CEP135Q66GS9 1140 aa7.84□□□□□ -1.15
LINC00440-201ENST00000446579 TXNDC11Q6PKC3 985 aa7.84□□□□□ -1.15
LINC00440-201ENST00000446579 MUC3BQ9H195 1237 aa7.84□□□□□ -1.15
LINC00440-201ENST00000446579 ANO2Q9NQ90 1003 aa7.84□□□□□ -1.15
LINC00440-201ENST00000446579 IGSF5Q9NSI5 407 aa7.84□□□□□ -1.15
LINC00440-201ENST00000446579 ECM1Q16610 540 aa7.83□□□□□ -1.16
LINC00440-201ENST00000446579 C8orf34Q49A92 452 aa7.83□□□□□ -1.16
LINC00440-201ENST00000446579 CACTIN-AS1Q8N1I8 211 aa7.83□□□□□ -1.16
LINC00440-201ENST00000446579 POLIQ9UNA4 740 aa7.83□□□□□ -1.16
LINC00440-201ENST00000446579 ATP11AP98196 1134 aa7.82□□□□□ -1.16
LINC00440-201ENST00000446579 EHHADHQ08426 723 aa7.82□□□□□ -1.16
LINC00440-201ENST00000446579 NPAS4Q8IUM7 802 aa7.82□□□□□ -1.16
LINC00440-201ENST00000446579 GGNBP2Q9H3C7 697 aa7.82□□□□□ -1.16
LINC00440-201ENST00000446579 TMEM63CQ9P1W3 806 aa7.82□□□□□ -1.16
LINC00440-201ENST00000446579 BIN2Q9UBW5 565 aaPredicted RBP7.82□□□□□ -1.16
LINC00440-201ENST00000446579 H3BRB1 525 aa7.81□□□□□ -1.16
LINC00440-201ENST00000446579 FZD6O60353 706 aa7.81□□□□□ -1.16
LINC00440-201ENST00000446579 SMNDC1O75940 238 aaKnown RBP eCLIP7.81□□□□□ -1.16
LINC00440-201ENST00000446579 KIF4AO95239 1232 aa7.81□□□□□ -1.16
LINC00440-201ENST00000446579 ZNF16P17020 682 aaPredicted RBP7.81□□□□□ -1.16
LINC00440-201ENST00000446579 COL13A1Q5TAT6 717 aaPredicted RBP7.81□□□□□ -1.16
LINC00440-201ENST00000446579 ACAD11Q709F0 780 aa7.81□□□□□ -1.16
LINC00440-201ENST00000446579 GLYCTKQ8IVS8 523 aa7.81□□□□□ -1.16
LINC00440-201ENST00000446579 PMEPA1Q969W9 287 aa7.81□□□□□ -1.16
LINC00440-201ENST00000446579 TUT1Q9H6E5 874 aaKnown RBP7.81□□□□□ -1.16
LINC00440-201ENST00000446579 RAXQ9Y2V3 346 aa7.81□□□□□ -1.16
LINC00440-201ENST00000446579 ANKRD33BA6NCL7 494 aa7.8□□□□□ -1.16
LINC00440-201ENST00000446579 FAM177BA6PVY3 158 aa7.8□□□□□ -1.16
LINC00440-201ENST00000446579 CDC27P30260 824 aa7.8□□□□□ -1.16
LINC00440-201ENST00000446579 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.8□□□□□ -1.16
LINC00440-201ENST00000446579 SLC51AQ86UW1 340 aa7.8□□□□□ -1.16
LINC00440-201ENST00000446579 GALNT11Q8NCW6 608 aa7.8□□□□□ -1.16
LINC00440-201ENST00000446579 KIAA1522Q9P206 1035 aaPredicted RBP7.8□□□□□ -1.16
LINC00440-201ENST00000446579 STOML1Q9UBI4 398 aa7.8□□□□□ -1.16
LINC00440-201ENST00000446579 CES1P23141 567 aa7.79□□□□□ -1.16
LINC00440-201ENST00000446579 CD68P34810 354 aaPredicted RBP7.79□□□□□ -1.16
LINC00440-201ENST00000446579 FAM117BQ6P1L5 589 aa7.79□□□□□ -1.16
LINC00440-201ENST00000446579 NCAPG2Q86XI2 1143 aa7.79□□□□□ -1.16
LINC00440-201ENST00000446579 UBL7Q96S82 380 aaPredicted RBP7.79□□□□□ -1.16
LINC00440-201ENST00000446579 CARD10Q9BWT7 1032 aa7.79□□□□□ -1.16
LINC00440-201ENST00000446579 BCL2L13Q9BXK5 485 aa7.79□□□□□ -1.16
LINC00440-201ENST00000446579 RASSF4Q9H2L5 321 aa7.79□□□□□ -1.16
LINC00440-201ENST00000446579 CNTN3Q9P232 1028 aa7.79□□□□□ -1.16
LINC00440-201ENST00000446579 A6NHS1 94 aa7.78□□□□□ -1.16
LINC00440-201ENST00000446579 WISP1O95388 367 aa7.78□□□□□ -1.16
LINC00440-201ENST00000446579 CYP2E1P05181 493 aaPredicted RBP7.78□□□□□ -1.16
LINC00440-201ENST00000446579 ARHGAP4P98171 946 aa7.78□□□□□ -1.16
LINC00440-201ENST00000446579 COL19A1Q14993 1142 aa7.78□□□□□ -1.16
LINC00440-201ENST00000446579 GJD3Q8N144 294 aa7.78□□□□□ -1.16
LINC00440-201ENST00000446579 C1orf127Q8N9H9 656 aa7.78□□□□□ -1.16
LINC00440-201ENST00000446579 ASB16Q96NS5 453 aa7.78□□□□□ -1.16
LINC00440-201ENST00000446579 CEP41Q9BYV8 373 aa7.78□□□□□ -1.16
LINC00440-201ENST00000446579 CCDC87Q9NVE4 849 aa7.78□□□□□ -1.16
LINC00440-201ENST00000446579 DCTN4Q9UJW0 460 aa7.78□□□□□ -1.16
LINC00440-201ENST00000446579 BRPF3Q9ULD4 1205 aa7.78□□□□□ -1.16
LINC00440-201ENST00000446579 GSC2O15499 205 aa7.77□□□□□ -1.17
LINC00440-201ENST00000446579 DHX15O43143 795 aaKnown RBP7.77□□□□□ -1.17
LINC00440-201ENST00000446579 IGLV1-40P01703 118 aa7.77□□□□□ -1.17
LINC00440-201ENST00000446579 Q6ZS46 218 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms