RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 CASZ1Q86V15 1759 aa10.79□□□□□ -0.68
LINC00578-204ENST00000446548 PDE1AP54750 535 aa10.78□□□□□ -0.68
LINC00578-204ENST00000446548 ITPK1Q13572 414 aa10.78□□□□□ -0.68
LINC00578-204ENST00000446548 RABL6Q3YEC7 729 aaPredicted RBP10.78□□□□□ -0.68
LINC00578-204ENST00000446548 MEX3CQ5U5Q3 659 aaKnown RBP10.78□□□□□ -0.68
LINC00578-204ENST00000446548 UBE3BQ7Z3V4 1068 aa10.78□□□□□ -0.68
LINC00578-204ENST00000446548 RHPN1Q8TCX5 695 aa10.78□□□□□ -0.68
LINC00578-204ENST00000446548 IPO9Q96P70 1041 aaKnown RBP10.78□□□□□ -0.68
LINC00578-204ENST00000446548 MTRQ99707 1265 aa10.78□□□□□ -0.68
LINC00578-204ENST00000446548 CWC25Q9NXE8 425 aaPredicted RBP10.78□□□□□ -0.68
LINC00578-204ENST00000446548 STAP2Q9UGK3 403 aa10.78□□□□□ -0.68
LINC00578-204ENST00000446548 PA2G4Q9UQ80 394 aaKnown RBP10.78□□□□□ -0.68
LINC00578-204ENST00000446548 SCN7AQ01118 1682 aa10.78□□□□□ -0.68
LINC00578-204ENST00000446548 MAP3K15Q6ZN16 1313 aa10.78□□□□□ -0.68
LINC00578-204ENST00000446548 A0A087WZG4 1122 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 LOC102724428A0A0B4J2F2 783 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 ACTN4O43707 911 aaKnown RBP10.77□□□□□ -0.69
LINC00578-204ENST00000446548 RFX5P48382 616 aaPredicted RBP10.77□□□□□ -0.69
LINC00578-204ENST00000446548 SIK1P57059 783 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 FOXO4P98177 505 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 TCIRG1Q13488 830 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 INTS5Q6P9B9 1019 aaKnown RBP10.77□□□□□ -0.69
LINC00578-204ENST00000446548 KIF6Q6ZMV9 814 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 CCDC191Q8NCU4 936 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 KIF1BPQ96EK5 621 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 GJD4Q96KN9 370 aaPredicted RBP10.77□□□□□ -0.69
LINC00578-204ENST00000446548 TBC1D32Q96NH3 1257 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 IL1RAPL2Q9NP60 686 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 GPCPD1Q9NPB8 672 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 DDX60Q8IY21 1712 aaKnown RBP10.77□□□□□ -0.69
LINC00578-204ENST00000446548 AOX1Q06278 1338 aa10.77□□□□□ -0.69
LINC00578-204ENST00000446548 CDC45O75419 566 aa10.76□□□□□ -0.69
LINC00578-204ENST00000446548 SDSP20132 328 aa10.76□□□□□ -0.69
LINC00578-204ENST00000446548 MX1P20591 662 aa10.76□□□□□ -0.69
LINC00578-204ENST00000446548 IL6STP40189 918 aaPredicted RBP10.76□□□□□ -0.69
LINC00578-204ENST00000446548 TRIM28Q13263 835 aaKnown RBP10.76□□□□□ -0.69
LINC00578-204ENST00000446548 HSP90AB4PQ58FF6 505 aa10.76□□□□□ -0.69
LINC00578-204ENST00000446548 TJAP1Q5JTD0 557 aa10.76□□□□□ -0.69
LINC00578-204ENST00000446548 TBC1D9Q6ZT07 1266 aa10.76□□□□□ -0.69
LINC00578-204ENST00000446548 PTF1AQ7RTS3 328 aa10.76□□□□□ -0.69
LINC00578-204ENST00000446548 SMARCC1Q92922 1105 aaPredicted RBP10.76□□□□□ -0.69
LINC00578-204ENST00000446548 AK7Q96M32 723 aa10.76□□□□□ -0.69
LINC00578-204ENST00000446548 BCL11AQ9H165 835 aa10.76□□□□□ -0.69
LINC00578-204ENST00000446548 USP42Q9H9J4 1324 aaKnown RBP10.76□□□□□ -0.69
LINC00578-204ENST00000446548 A0A0G2JS52 829 aa10.75□□□□□ -0.69
LINC00578-204ENST00000446548 SASH1O94885 1247 aa10.75□□□□□ -0.69
LINC00578-204ENST00000446548 ATP6V1AP38606 617 aa10.75□□□□□ -0.69
LINC00578-204ENST00000446548 CRKLP46109 303 aaKnown RBP10.75□□□□□ -0.69
LINC00578-204ENST00000446548 EIF5P55010 431 aaKnown RBP10.75□□□□□ -0.69
LINC00578-204ENST00000446548 MFAP1P55081 439 aaKnown RBP10.75□□□□□ -0.69
LINC00578-204ENST00000446548 TTLL12Q14166 644 aaPredicted RBP10.75□□□□□ -0.69
LINC00578-204ENST00000446548 HLFQ16534 295 aa10.75□□□□□ -0.69
LINC00578-204ENST00000446548 TSHZ3Q63HK5 1081 aa10.75□□□□□ -0.69
LINC00578-204ENST00000446548 GIGYF2Q6Y7W6 1299 aaKnown RBP10.75□□□□□ -0.69
LINC00578-204ENST00000446548 CCDC87Q9NVE4 849 aa10.75□□□□□ -0.69
LINC00578-204ENST00000446548 ZNF330Q9Y3S2 320 aaPredicted RBP10.75□□□□□ -0.69
LINC00578-204ENST00000446548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.75□□□□□ -0.69
LINC00578-204ENST00000446548 COPS2P61201 443 aa10.74□□□□□ -0.69
LINC00578-204ENST00000446548 PTPN12Q05209 780 aaKnown RBP10.74□□□□□ -0.69
LINC00578-204ENST00000446548 NUTM1Q86Y26 1132 aa10.74□□□□□ -0.69
LINC00578-204ENST00000446548 PI4K2BQ8TCG2 481 aa10.74□□□□□ -0.69
LINC00578-204ENST00000446548 COPRSQ9NQ92 184 aa10.74□□□□□ -0.69
LINC00578-204ENST00000446548 TRPC5Q9UL62 973 aaPredicted RBP10.74□□□□□ -0.69
LINC00578-204ENST00000446548 C4AP0C0L4 1744 aa10.74□□□□□ -0.69
LINC00578-204ENST00000446548 C4BP0C0L5 1744 aa10.74□□□□□ -0.69
LINC00578-204ENST00000446548 LRP5O75197 1615 aa10.73□□□□□ -0.69
LINC00578-204ENST00000446548 COL24A1Q17RW2 1714 aa10.73□□□□□ -0.69
LINC00578-204ENST00000446548 ERVV-1B6SEH8 477 aa10.73□□□□□ -0.69
LINC00578-204ENST00000446548 PCCAP05165 728 aaPredicted RBP10.73□□□□□ -0.69
LINC00578-204ENST00000446548 MYT1Q01538 1121 aa10.73□□□□□ -0.69
LINC00578-204ENST00000446548 LMBR1LQ6UX01 489 aa10.73□□□□□ -0.69
LINC00578-204ENST00000446548 NLRP10Q86W26 655 aa10.73□□□□□ -0.69
LINC00578-204ENST00000446548 ERC1Q8IUD2 1116 aa10.73□□□□□ -0.69
LINC00578-204ENST00000446548 LINC00116Q8NCU8 138 aa10.73□□□□□ -0.69
LINC00578-204ENST00000446548 KLHDC4Q8TBB5 520 aa10.73□□□□□ -0.69
LINC00578-204ENST00000446548 DDRGK1Q96HY6 314 aa10.73□□□□□ -0.69
LINC00578-204ENST00000446548 OS9Q13438 667 aaPredicted RBP10.72□□□□□ -0.69
LINC00578-204ENST00000446548 AMHR2Q16671 573 aa10.72□□□□□ -0.69
LINC00578-204ENST00000446548 HSP90AB3PQ58FF7 597 aa10.72□□□□□ -0.69
LINC00578-204ENST00000446548 RTL5Q5HYW3 569 aaPredicted RBP10.72□□□□□ -0.69
LINC00578-204ENST00000446548 FAM182BQ5T319 152 aa10.72□□□□□ -0.69
LINC00578-204ENST00000446548 DZIP3Q86Y13 1208 aaKnown RBP10.72□□□□□ -0.69
LINC00578-204ENST00000446548 PLA2G12BQ9BX93 195 aa10.72□□□□□ -0.69
LINC00578-204ENST00000446548 SIL1Q9H173 461 aa10.72□□□□□ -0.69
LINC00578-204ENST00000446548 UPF2Q9HAU5 1272 aaKnown RBP10.72□□□□□ -0.69
LINC00578-204ENST00000446548 TBC1D2BQ9UPU7 963 aa10.72□□□□□ -0.69
LINC00578-204ENST00000446548 UBN2Q6ZU65 1347 aa10.72□□□□□ -0.69
LINC00578-204ENST00000446548 CDHR2Q9BYE9 1310 aa10.72□□□□□ -0.69
LINC00578-204ENST00000446548 SPEF2Q9C093 1822 aa10.72□□□□□ -0.69
LINC00578-204ENST00000446548 CAMTA2O94983 1202 aa10.71□□□□□ -0.69
LINC00578-204ENST00000446548 GPTP24298 496 aa10.71□□□□□ -0.69
LINC00578-204ENST00000446548 GCGRP47871 477 aa10.71□□□□□ -0.69
LINC00578-204ENST00000446548 G3BP1Q13283 466 aaKnown RBP eCLIP10.71□□□□□ -0.69
LINC00578-204ENST00000446548 BLOC1S3Q6QNY0 202 aa10.71□□□□□ -0.69
LINC00578-204ENST00000446548 SEPT12Q8IYM1 358 aa10.71□□□□□ -0.69
LINC00578-204ENST00000446548 ZNF34Q8IZ26 560 aa10.71□□□□□ -0.69
LINC00578-204ENST00000446548 C22orf23Q9BZE7 217 aa10.71□□□□□ -0.69
LINC00578-204ENST00000446548 CNTNAP4Q9C0A0 1308 aa10.71□□□□□ -0.69
LINC00578-204ENST00000446548 UBR3Q6ZT12 1888 aa10.7□□□□□ -0.7
LINC00578-204ENST00000446548 A0A1B0GUL6 1792 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms