RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 BABAM1Q9NWV8 329 aa12.98□□□□□ -0.33
UBE2D4-206ENST00000446008 RTL9Q8NET4 1388 aa12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 DDX60Q8IY21 1712 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 ANXA1P04083 346 aa12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 VIL1P09327 827 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 SF3B3Q15393 1217 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 PKN2Q16513 984 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 PNNQ9H307 717 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 POLLQ9UGP5 575 aa12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 TSPYL4Q9UJ04 414 aa12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 NSFL1CQ9UNZ2 370 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 SCN9AQ15858 1988 aa12.97□□□□□ -0.33
UBE2D4-206ENST00000446008 RIMBP2O15034 1052 aa12.96□□□□□ -0.33
UBE2D4-206ENST00000446008 ECE2O60344 883 aa12.96□□□□□ -0.33
UBE2D4-206ENST00000446008 FKBP1BP68106 108 aa12.96□□□□□ -0.33
UBE2D4-206ENST00000446008 AIMP1Q12904 312 aaKnown RBP12.96□□□□□ -0.33
UBE2D4-206ENST00000446008 KIF4BQ2VIQ3 1234 aa12.96□□□□□ -0.33
UBE2D4-206ENST00000446008 SULF1Q8IWU6 871 aa12.96□□□□□ -0.33
UBE2D4-206ENST00000446008 XAGE3Q8WTP9 111 aa12.96□□□□□ -0.33
UBE2D4-206ENST00000446008 CELF1Q92879 486 aaKnown RBP12.96□□□□□ -0.33
UBE2D4-206ENST00000446008 EYA3Q99504 573 aa12.96□□□□□ -0.33
UBE2D4-206ENST00000446008 HPS5Q9UPZ3 1129 aa12.96□□□□□ -0.33
UBE2D4-206ENST00000446008 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
UBE2D4-206ENST00000446008 GTPBP6O43824 516 aaPredicted RBP12.95□□□□□ -0.34
UBE2D4-206ENST00000446008 RASAL3Q86YV0 1011 aa12.95□□□□□ -0.34
UBE2D4-206ENST00000446008 CDCA5Q96FF9 252 aa12.95□□□□□ -0.34
UBE2D4-206ENST00000446008 GGA3Q9NZ52 723 aa12.95□□□□□ -0.34
UBE2D4-206ENST00000446008 GPSM2P81274 684 aa12.94□□□□□ -0.34
UBE2D4-206ENST00000446008 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
UBE2D4-206ENST00000446008 TBC1D16Q8TBP0 767 aa12.94□□□□□ -0.34
UBE2D4-206ENST00000446008 PODXL2Q9NZ53 605 aa12.94□□□□□ -0.34
UBE2D4-206ENST00000446008 ZNF609O15014 1411 aa12.94□□□□□ -0.34
UBE2D4-206ENST00000446008 PSME4Q14997 1843 aa12.93□□□□□ -0.34
UBE2D4-206ENST00000446008 ZNF280AP59817 542 aaPredicted RBP12.93□□□□□ -0.34
UBE2D4-206ENST00000446008 NOM1Q5C9Z4 860 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-206ENST00000446008 AGBL3Q8NEM8 1001 aa12.93□□□□□ -0.34
UBE2D4-206ENST00000446008 NECTIN2Q92692 538 aa12.93□□□□□ -0.34
UBE2D4-206ENST00000446008 ISCA1Q9BUE6 129 aa12.93□□□□□ -0.34
UBE2D4-206ENST00000446008 ZC3H12CQ9C0D7 883 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-206ENST00000446008 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
UBE2D4-206ENST00000446008 PAPPA2Q9BXP8 1791 aa12.93□□□□□ -0.34
UBE2D4-206ENST00000446008 ASTN2O75129 1339 aaPredicted RBP12.92□□□□□ -0.34
UBE2D4-206ENST00000446008 PITPNM2Q9BZ72 1349 aa12.92□□□□□ -0.34
UBE2D4-206ENST00000446008 MAPK8IP3Q9UPT6 1336 aa12.92□□□□□ -0.34
UBE2D4-206ENST00000446008 RPS8P62241 208 aaKnown RBP12.92□□□□□ -0.34
UBE2D4-206ENST00000446008 SCARF1Q14162 830 aa12.92□□□□□ -0.34
UBE2D4-206ENST00000446008 PLBD2Q8NHP8 589 aa12.92□□□□□ -0.34
UBE2D4-206ENST00000446008 ZNF296Q8WUU4 475 aaPredicted RBP12.92□□□□□ -0.34
UBE2D4-206ENST00000446008 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
UBE2D4-206ENST00000446008 HDAC9Q9UKV0 1011 aa12.92□□□□□ -0.34
UBE2D4-206ENST00000446008 MKI67P46013 3256 aaKnown RBP12.91□□□□□ -0.34
UBE2D4-206ENST00000446008 TM4SF4P48230 202 aa12.91□□□□□ -0.34
UBE2D4-206ENST00000446008 RIPK4P57078 832 aa12.91□□□□□ -0.34
UBE2D4-206ENST00000446008 ANGEL2Q5VTE6 544 aaKnown RBP12.91□□□□□ -0.34
UBE2D4-206ENST00000446008 RSBN1LQ6PCB5 846 aaPredicted RBP12.91□□□□□ -0.34
UBE2D4-206ENST00000446008 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
UBE2D4-206ENST00000446008 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
UBE2D4-206ENST00000446008 GMLQ99445 158 aa12.91□□□□□ -0.34
UBE2D4-206ENST00000446008 COL4A1P02462 1669 aa12.91□□□□□ -0.34
UBE2D4-206ENST00000446008 TBC1D8O95759 1140 aa12.9□□□□□ -0.34
UBE2D4-206ENST00000446008 TRIM28Q13263 835 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-206ENST00000446008 FBXO46Q6PJ61 603 aaPredicted RBP12.9□□□□□ -0.34
UBE2D4-206ENST00000446008 CFHR5Q9BXR6 569 aa12.89□□□□□ -0.35
UBE2D4-206ENST00000446008 MYOZ2Q9NPC6 264 aa12.89□□□□□ -0.35
UBE2D4-206ENST00000446008 ATP5J2-PTCD1G3V325 749 aa12.88□□□□□ -0.35
UBE2D4-206ENST00000446008 GPR25O00155 361 aa12.88□□□□□ -0.35
UBE2D4-206ENST00000446008 IRS4O14654 1257 aaPredicted RBP12.88□□□□□ -0.35
UBE2D4-206ENST00000446008 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
UBE2D4-206ENST00000446008 LMOD3Q0VAK6 560 aa12.88□□□□□ -0.35
UBE2D4-206ENST00000446008 MOB2Q70IA6 237 aa12.88□□□□□ -0.35
UBE2D4-206ENST00000446008 ZNF428Q96B54 188 aa12.88□□□□□ -0.35
UBE2D4-206ENST00000446008 CHPF2Q9P2E5 772 aa12.88□□□□□ -0.35
UBE2D4-206ENST00000446008 GGA1Q9UJY5 639 aa12.88□□□□□ -0.35
UBE2D4-206ENST00000446008 UBE2Q2LH0YL09 131 aa12.87□□□□□ -0.35
UBE2D4-206ENST00000446008 CHL1O00533 1208 aa12.87□□□□□ -0.35
UBE2D4-206ENST00000446008 UFL1O94874 794 aa12.87□□□□□ -0.35
UBE2D4-206ENST00000446008 HOXB7P09629 217 aa12.87□□□□□ -0.35
UBE2D4-206ENST00000446008 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
UBE2D4-206ENST00000446008 PODNQ7Z5L7 613 aa12.87□□□□□ -0.35
UBE2D4-206ENST00000446008 ANKIB1Q9P2G1 1089 aa12.87□□□□□ -0.35
UBE2D4-206ENST00000446008 HTTP42858 3142 aa12.86□□□□□ -0.35
UBE2D4-206ENST00000446008 FKTNO75072 461 aa12.86□□□□□ -0.35
UBE2D4-206ENST00000446008 HSP90B1P14625 803 aaKnown RBP12.86□□□□□ -0.35
UBE2D4-206ENST00000446008 KRT24Q2M2I5 525 aa12.86□□□□□ -0.35
UBE2D4-206ENST00000446008 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
UBE2D4-206ENST00000446008 ZBTB38Q8NAP3 1195 aaPredicted RBP12.86□□□□□ -0.35
UBE2D4-206ENST00000446008 SEC31BQ9NQW1 1179 aa12.86□□□□□ -0.35
UBE2D4-206ENST00000446008 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
UBE2D4-206ENST00000446008 CENPFP49454 3210 aa12.86□□□□□ -0.35
UBE2D4-206ENST00000446008 USP17L3A6NCW0 530 aa12.85□□□□□ -0.35
UBE2D4-206ENST00000446008 USP17L4A6NCW7 530 aa12.85□□□□□ -0.35
UBE2D4-206ENST00000446008 SREBF2Q12772 1141 aa12.85□□□□□ -0.35
UBE2D4-206ENST00000446008 HDGFL1Q5TGJ6 251 aa12.85□□□□□ -0.35
UBE2D4-206ENST00000446008 USP17L1Q7RTZ2 530 aa12.85□□□□□ -0.35
UBE2D4-206ENST00000446008 HYPKQ9NX55 129 aa12.85□□□□□ -0.35
UBE2D4-206ENST00000446008 ATP2B4P23634 1241 aa12.84□□□□□ -0.35
UBE2D4-206ENST00000446008 MMP14P50281 582 aa12.84□□□□□ -0.35
UBE2D4-206ENST00000446008 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms