RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 FRAT1Q92837 279 aaPredicted RBP19.25■□□□□ 0.67
SEC22C-208ENST00000445388 MXD3Q9BW11 206 aa19.25■□□□□ 0.67
SEC22C-208ENST00000445388 COA1Q9GZY4 146 aa19.25■□□□□ 0.67
SEC22C-208ENST00000445388 ZBED9Q6R2W3 1325 aa19.25■□□□□ 0.67
SEC22C-208ENST00000445388 KIF16BQ96L93 1317 aa19.25■□□□□ 0.67
SEC22C-208ENST00000445388 IRS2Q9Y4H2 1338 aa19.25■□□□□ 0.67
SEC22C-208ENST00000445388 USP17L3A6NCW0 530 aa19.24■□□□□ 0.67
SEC22C-208ENST00000445388 USP17L4A6NCW7 530 aa19.24■□□□□ 0.67
SEC22C-208ENST00000445388 USP17L1Q7RTZ2 530 aa19.24■□□□□ 0.67
SEC22C-208ENST00000445388 KLHDC4Q8TBB5 520 aa19.24■□□□□ 0.67
SEC22C-208ENST00000445388 KLRG1Q96E93 195 aa19.24■□□□□ 0.67
SEC22C-208ENST00000445388 TRAF5O00463 557 aa19.23■□□□□ 0.67
SEC22C-208ENST00000445388 LRRC24Q50LG9 513 aa19.23■□□□□ 0.67
SEC22C-208ENST00000445388 FBXW7Q969H0 707 aa19.23■□□□□ 0.67
SEC22C-208ENST00000445388 CREBZFQ9NS37 354 aa19.23■□□□□ 0.67
SEC22C-208ENST00000445388 PGAP2Q9UHJ9 254 aa19.23■□□□□ 0.67
SEC22C-208ENST00000445388 RIPOR2Q9Y4F9 1068 aa19.23■□□□□ 0.67
SEC22C-208ENST00000445388 A0A1B0GUL6 1792 aa19.23■□□□□ 0.67
SEC22C-208ENST00000445388 UBTFL1P0CB47 393 aaPredicted RBP19.22■□□□□ 0.67
SEC22C-208ENST00000445388 TRIM27P14373 513 aa19.22■□□□□ 0.67
SEC22C-208ENST00000445388 GMLQ99445 158 aa19.22■□□□□ 0.67
SEC22C-208ENST00000445388 IPO8O15397 1037 aaKnown RBP19.21■□□□□ 0.67
SEC22C-208ENST00000445388 DACT2Q5SW24 774 aa19.21■□□□□ 0.67
SEC22C-208ENST00000445388 INTS3Q68E01 1043 aaKnown RBP19.21■□□□□ 0.67
SEC22C-208ENST00000445388 C15orf52Q6ZUT6 534 aaKnown RBP19.21■□□□□ 0.67
SEC22C-208ENST00000445388 AGBL3Q8NEM8 1001 aa19.21■□□□□ 0.67
SEC22C-208ENST00000445388 CLUAP1Q96AJ1 413 aa19.21■□□□□ 0.67
SEC22C-208ENST00000445388 MEIS3Q99687 375 aa19.21■□□□□ 0.67
SEC22C-208ENST00000445388 GLIS2Q9BZE0 524 aaPredicted RBP19.21■□□□□ 0.67
SEC22C-208ENST00000445388 CD209Q9NNX6 404 aa19.21■□□□□ 0.67
SEC22C-208ENST00000445388 TMEM88BA6NKF7 163 aa19.2■□□□□ 0.66
SEC22C-208ENST00000445388 RFX5P48382 616 aaPredicted RBP19.2■□□□□ 0.66
SEC22C-208ENST00000445388 ATF7IPQ6VMQ6 1270 aa19.2■□□□□ 0.66
SEC22C-208ENST00000445388 LRRFIP2Q9Y608 721 aaKnown RBP19.2■□□□□ 0.66
SEC22C-208ENST00000445388 PSME4Q14997 1843 aa19.2■□□□□ 0.66
SEC22C-208ENST00000445388 ZNF280AP59817 542 aaPredicted RBP19.19■□□□□ 0.66
SEC22C-208ENST00000445388 GTF2IP78347 998 aa19.19■□□□□ 0.66
SEC22C-208ENST00000445388 KIF4BQ2VIQ3 1234 aa19.19■□□□□ 0.66
SEC22C-208ENST00000445388 STRIP1Q5VSL9 837 aa19.19■□□□□ 0.66
SEC22C-208ENST00000445388 TTLL5Q6EMB2 1281 aa19.19■□□□□ 0.66
SEC22C-208ENST00000445388 DLK2Q6UY11 383 aa19.19■□□□□ 0.66
SEC22C-208ENST00000445388 ZC3H15Q8WU90 426 aaKnown RBP19.19■□□□□ 0.66
SEC22C-208ENST00000445388 MKRN1Q9UHC7 482 aaKnown RBP19.19■□□□□ 0.66
SEC22C-208ENST00000445388 USP17L8P0C7I0 530 aa19.18■□□□□ 0.66
SEC22C-208ENST00000445388 ASTN2O75129 1339 aaPredicted RBP19.18■□□□□ 0.66
SEC22C-208ENST00000445388 MROH5Q6ZUA9 1318 aa19.18■□□□□ 0.66
SEC22C-208ENST00000445388 ZNF646O15015 1829 aaPredicted RBP19.18■□□□□ 0.66
SEC22C-208ENST00000445388 ZNF609O15014 1411 aa19.17■□□□□ 0.66
SEC22C-208ENST00000445388 PTPN12Q05209 780 aaKnown RBP19.17■□□□□ 0.66
SEC22C-208ENST00000445388 UBE4AQ14139 1066 aa19.17■□□□□ 0.66
SEC22C-208ENST00000445388 METTL24Q5JXM2 366 aa19.17■□□□□ 0.66
SEC22C-208ENST00000445388 CST9Q5W186 159 aa19.17■□□□□ 0.66
SEC22C-208ENST00000445388 ZNF804AQ7Z570 1209 aa19.17■□□□□ 0.66
SEC22C-208ENST00000445388 USP48Q86UV5 1035 aa19.17■□□□□ 0.66
SEC22C-208ENST00000445388 IL1R1P14778 569 aa19.16■□□□□ 0.66
SEC22C-208ENST00000445388 GYG1P46976 350 aa19.16■□□□□ 0.66
SEC22C-208ENST00000445388 ZKSCAN2Q63HK3 967 aa19.16■□□□□ 0.66
SEC22C-208ENST00000445388 CDC37L1Q7L3B6 337 aa19.16■□□□□ 0.66
SEC22C-208ENST00000445388 JMYQ8N9B5 988 aa19.16■□□□□ 0.66
SEC22C-208ENST00000445388 MYOZ2Q9NPC6 264 aa19.16■□□□□ 0.66
SEC22C-208ENST00000445388 SCARF1Q14162 830 aa19.15■□□□□ 0.66
SEC22C-208ENST00000445388 TMEM57Q8N5G2 664 aa19.15■□□□□ 0.66
SEC22C-208ENST00000445388 VGLL2Q8N8G2 317 aa19.15■□□□□ 0.66
SEC22C-208ENST00000445388 FAM84BQ96KN1 310 aaPredicted RBP19.15■□□□□ 0.66
SEC22C-208ENST00000445388 JAG2Q9Y219 1238 aa19.15■□□□□ 0.66
SEC22C-208ENST00000445388 EYA2O00167 538 aa19.14■□□□□ 0.65
SEC22C-208ENST00000445388 PDE8BO95263 885 aa19.14■□□□□ 0.65
SEC22C-208ENST00000445388 ATG9AQ7Z3C6 839 aa19.14■□□□□ 0.65
SEC22C-208ENST00000445388 KIAA0825Q8IV33 1275 aa19.14■□□□□ 0.65
SEC22C-208ENST00000445388 CERS5Q8N5B7 392 aa19.14■□□□□ 0.65
SEC22C-208ENST00000445388 DCPSQ96C86 337 aaKnown RBP19.14■□□□□ 0.65
SEC22C-208ENST00000445388 SIL1Q9H173 461 aa19.14■□□□□ 0.65
SEC22C-208ENST00000445388 ADM5C9JUS6 153 aa19.13■□□□□ 0.65
SEC22C-208ENST00000445388 CELF2O95319 508 aaKnown RBP19.13■□□□□ 0.65
SEC22C-208ENST00000445388 GNAI3P08754 354 aa19.13■□□□□ 0.65
SEC22C-208ENST00000445388 HIBADHP31937 336 aaKnown RBP19.13■□□□□ 0.65
SEC22C-208ENST00000445388 KRT26Q7Z3Y9 468 aa19.13■□□□□ 0.65
SEC22C-208ENST00000445388 ZNF408Q9H9D4 720 aa19.13■□□□□ 0.65
SEC22C-208ENST00000445388 GGA3Q9NZ52 723 aa19.13■□□□□ 0.65
SEC22C-208ENST00000445388 ABT1Q9ULW3 272 aaKnown RBP19.13■□□□□ 0.65
SEC22C-208ENST00000445388 PA2G4Q9UQ80 394 aaKnown RBP19.13■□□□□ 0.65
SEC22C-208ENST00000445388 MYO3BQ8WXR4 1341 aa19.13■□□□□ 0.65
SEC22C-208ENST00000445388 CNTNAP1P78357 1384 aa19.13■□□□□ 0.65
SEC22C-208ENST00000445388 NBPF9Q3BBW0 867 aa19.12■□□□□ 0.65
SEC22C-208ENST00000445388 ANGEL2Q5VTE6 544 aaKnown RBP19.12■□□□□ 0.65
SEC22C-208ENST00000445388 OGFOD1Q8N543 542 aa19.12■□□□□ 0.65
SEC22C-208ENST00000445388 TDRD7Q8NHU6 1098 aaKnown RBP19.12■□□□□ 0.65
SEC22C-208ENST00000445388 SCAF8Q9UPN6 1271 aaKnown RBP19.12■□□□□ 0.65
SEC22C-208ENST00000445388 HDAC5Q9UQL6 1122 aa19.12■□□□□ 0.65
SEC22C-208ENST00000445388 SASH1O94885 1247 aa19.11■□□□□ 0.65
SEC22C-208ENST00000445388 VEGFBP49765 207 aa19.11■□□□□ 0.65
SEC22C-208ENST00000445388 DEFB115Q30KQ5 88 aa19.11■□□□□ 0.65
SEC22C-208ENST00000445388 FBXO33Q7Z6M2 555 aa19.11■□□□□ 0.65
SEC22C-208ENST00000445388 IQSEC3Q9UPP2 1182 aaPredicted RBP19.11■□□□□ 0.65
SEC22C-208ENST00000445388 POLR2AP24928 1970 aaKnown RBP19.11■□□□□ 0.65
SEC22C-208ENST00000445388 TRPM7Q96QT4 1865 aa19.1■□□□□ 0.65
SEC22C-208ENST00000445388 RASSF10A6NK89 507 aa19.1■□□□□ 0.65
SEC22C-208ENST00000445388 F8W031 263 aaPredicted RBP19.1■□□□□ 0.65
SEC22C-208ENST00000445388 RLBP1P12271 317 aa19.1■□□□□ 0.65
SEC22C-208ENST00000445388 FGFR2P21802 821 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms