RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 TAF7Q15545 349 aaPredicted RBP10.53□□□□□ -0.72
LINC02549-201ENST00000445346 CC2D2BQ6DHV5 1058 aa10.53□□□□□ -0.72
LINC02549-201ENST00000445346 NUTM1Q86Y26 1132 aa10.53□□□□□ -0.72
LINC02549-201ENST00000445346 LARGE2Q8N3Y3 721 aa10.53□□□□□ -0.72
LINC02549-201ENST00000445346 ZNF516Q92618 1163 aa10.53□□□□□ -0.72
LINC02549-201ENST00000445346 PSMD1Q99460 953 aa10.53□□□□□ -0.72
LINC02549-201ENST00000445346 SLC24A3Q9HC58 644 aa10.53□□□□□ -0.72
LINC02549-201ENST00000445346 TCERG1O14776 1098 aaKnown RBP10.52□□□□□ -0.73
LINC02549-201ENST00000445346 HTATSF1O43719 755 aaKnown RBP10.52□□□□□ -0.73
LINC02549-201ENST00000445346 HSPA8P11142 646 aaKnown RBP10.52□□□□□ -0.73
LINC02549-201ENST00000445346 ECE1P42892 770 aa10.52□□□□□ -0.73
LINC02549-201ENST00000445346 KIF6Q6ZMV9 814 aa10.52□□□□□ -0.73
LINC02549-201ENST00000445346 SLF2Q8IX21 1173 aa10.52□□□□□ -0.73
LINC02549-201ENST00000445346 ABHD8Q96I13 439 aa10.52□□□□□ -0.73
LINC02549-201ENST00000445346 RBM17Q96I25 401 aaKnown RBP10.52□□□□□ -0.73
LINC02549-201ENST00000445346 DDX21Q9NR30 783 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC02549-201ENST00000445346 MIS18AQ9NYP9 233 aa10.52□□□□□ -0.73
LINC02549-201ENST00000445346 DAXXQ9UER7 740 aaPredicted RBP10.52□□□□□ -0.73
LINC02549-201ENST00000445346 RRP7AQ9Y3A4 280 aaKnown RBP10.52□□□□□ -0.73
LINC02549-201ENST00000445346 CFHP08603 1231 aa10.51□□□□□ -0.73
LINC02549-201ENST00000445346 GRIPAP1Q4V328 841 aa10.51□□□□□ -0.73
LINC02549-201ENST00000445346 MTRQ99707 1265 aa10.51□□□□□ -0.73
LINC02549-201ENST00000445346 SIPA1L3O60292 1781 aaPredicted RBP10.51□□□□□ -0.73
LINC02549-201ENST00000445346 BCORQ6W2J9 1755 aa10.51□□□□□ -0.73
LINC02549-201ENST00000445346 ARFGEF2Q9Y6D5 1785 aa10.51□□□□□ -0.73
LINC02549-201ENST00000445346 CCDC85CA6NKD9 419 aa10.5□□□□□ -0.73
LINC02549-201ENST00000445346 ERVV-1B6SEH8 477 aa10.5□□□□□ -0.73
LINC02549-201ENST00000445346 GPTP24298 496 aa10.5□□□□□ -0.73
LINC02549-201ENST00000445346 EPS15P42566 896 aa10.5□□□□□ -0.73
LINC02549-201ENST00000445346 CRY2Q49AN0 593 aa10.5□□□□□ -0.73
LINC02549-201ENST00000445346 NIM1KQ8IY84 436 aa10.5□□□□□ -0.73
LINC02549-201ENST00000445346 PNISRQ8TF01 805 aaKnown RBP10.5□□□□□ -0.73
LINC02549-201ENST00000445346 CAPNS2Q96L46 248 aa10.5□□□□□ -0.73
LINC02549-201ENST00000445346 GPR101Q96P66 508 aaPredicted RBP10.5□□□□□ -0.73
LINC02549-201ENST00000445346 MAP3K15Q6ZN16 1313 aa10.5□□□□□ -0.73
LINC02549-201ENST00000445346 PPEF1O14829 653 aaPredicted RBP10.49□□□□□ -0.73
LINC02549-201ENST00000445346 TRIM66O15016 1216 aa10.49□□□□□ -0.73
LINC02549-201ENST00000445346 PPIP5K2O43314 1243 aa10.49□□□□□ -0.73
LINC02549-201ENST00000445346 MYL6BP14649 208 aa10.49□□□□□ -0.73
LINC02549-201ENST00000445346 FMR1Q06787 632 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC02549-201ENST00000445346 CYP4F22Q6NT55 531 aa10.49□□□□□ -0.73
LINC02549-201ENST00000445346 USP50Q70EL3 339 aaPredicted RBP10.49□□□□□ -0.73
LINC02549-201ENST00000445346 NKX2-3Q8TAU0 364 aa10.49□□□□□ -0.73
LINC02549-201ENST00000445346 ZBTB3Q9H5J0 574 aa10.49□□□□□ -0.73
LINC02549-201ENST00000445346 DDX11L8A8MPP1 907 aa10.48□□□□□ -0.73
LINC02549-201ENST00000445346 TRAF5O00463 557 aa10.48□□□□□ -0.73
LINC02549-201ENST00000445346 PPP2R1AP30153 589 aa10.48□□□□□ -0.73
LINC02549-201ENST00000445346 HOXA10P31260 410 aaPredicted RBP10.48□□□□□ -0.73
LINC02549-201ENST00000445346 SCNN1DP51172 638 aa10.48□□□□□ -0.73
LINC02549-201ENST00000445346 SUSD4Q5VX71 490 aa10.48□□□□□ -0.73
LINC02549-201ENST00000445346 BLOC1S3Q6QNY0 202 aa10.48□□□□□ -0.73
LINC02549-201ENST00000445346 PPP1R42Q7Z4L9 355 aa10.48□□□□□ -0.73
LINC02549-201ENST00000445346 CRAMP1Q96RY5 1269 aa10.48□□□□□ -0.73
LINC02549-201ENST00000445346 ABCC12Q96J65 1359 aa10.48□□□□□ -0.73
LINC02549-201ENST00000445346 AOC3Q16853 763 aa10.47□□□□□ -0.73
LINC02549-201ENST00000445346 CST9Q5W186 159 aa10.47□□□□□ -0.73
LINC02549-201ENST00000445346 TTLL7Q6ZT98 887 aa10.47□□□□□ -0.73
LINC02549-201ENST00000445346 NLRP3Q96P20 1036 aa10.47□□□□□ -0.73
LINC02549-201ENST00000445346 ADARB2Q9NS39 739 aaKnown RBP10.47□□□□□ -0.73
LINC02549-201ENST00000445346 TLL2Q9Y6L7 1015 aa10.47□□□□□ -0.73
LINC02549-201ENST00000445346 TLL1O43897 1013 aa10.46□□□□□ -0.73
LINC02549-201ENST00000445346 CELF2O95319 508 aaKnown RBP10.46□□□□□ -0.73
LINC02549-201ENST00000445346 CD46P15529 392 aa10.46□□□□□ -0.73
LINC02549-201ENST00000445346 MAP2K2P36507 400 aa10.46□□□□□ -0.73
LINC02549-201ENST00000445346 EIF4A1P60842 406 aaKnown RBP10.46□□□□□ -0.73
LINC02549-201ENST00000445346 COPS2P61201 443 aa10.46□□□□□ -0.73
LINC02549-201ENST00000445346 MLLT1Q03111 559 aaPredicted RBP10.46□□□□□ -0.73
LINC02549-201ENST00000445346 AMHR2Q16671 573 aa10.46□□□□□ -0.73
LINC02549-201ENST00000445346 PUS10Q3MIT2 529 aaKnown RBP10.46□□□□□ -0.73
LINC02549-201ENST00000445346 SUPT20HQ8NEM7 779 aa10.46□□□□□ -0.73
LINC02549-201ENST00000445346 HLA-CQ95604 372 aa10.46□□□□□ -0.73
LINC02549-201ENST00000445346 BCL2L13Q9BXK5 485 aa10.46□□□□□ -0.73
LINC02549-201ENST00000445346 VPS33BQ9H267 617 aa10.46□□□□□ -0.73
LINC02549-201ENST00000445346 ZNF408Q9H9D4 720 aa10.46□□□□□ -0.73
LINC02549-201ENST00000445346 FAM217BQ9NTX9 383 aaPredicted RBP10.46□□□□□ -0.73
LINC02549-201ENST00000445346 GPRC5DQ9NZD1 345 aa10.46□□□□□ -0.73
LINC02549-201ENST00000445346 ADAMTSL1Q8N6G6 1762 aa10.46□□□□□ -0.74
LINC02549-201ENST00000445346 UBN2Q6ZU65 1347 aa10.45□□□□□ -0.74
LINC02549-201ENST00000445346 ACTN4O43707 911 aaKnown RBP10.45□□□□□ -0.74
LINC02549-201ENST00000445346 AOC2O75106 756 aa10.45□□□□□ -0.74
LINC02549-201ENST00000445346 PARP10Q53GL7 1025 aa10.45□□□□□ -0.74
LINC02549-201ENST00000445346 GIGYF2Q6Y7W6 1299 aaKnown RBP10.45□□□□□ -0.74
LINC02549-201ENST00000445346 NYAP1Q6ZVC0 841 aa10.45□□□□□ -0.74
LINC02549-201ENST00000445346 PARP9Q8IXQ6 854 aa10.45□□□□□ -0.74
LINC02549-201ENST00000445346 ZNF34Q8IZ26 560 aa10.45□□□□□ -0.74
LINC02549-201ENST00000445346 KRI1Q8N9T8 703 aaKnown RBP10.45□□□□□ -0.74
LINC02549-201ENST00000445346 UTP14AQ9BVJ6 771 aaKnown RBP10.45□□□□□ -0.74
LINC02549-201ENST00000445346 ZNRF3Q9ULT6 936 aa10.45□□□□□ -0.74
LINC02549-201ENST00000445346 ATP6V0A2Q9Y487 856 aa10.45□□□□□ -0.74
LINC02549-201ENST00000445346 SNED1Q8TER0 1413 aa10.44□□□□□ -0.74
LINC02549-201ENST00000445346 IBTKQ9P2D0 1353 aaPredicted RBP10.44□□□□□ -0.74
LINC02549-201ENST00000445346 CA12O43570 354 aa10.44□□□□□ -0.74
LINC02549-201ENST00000445346 NTSR2O95665 410 aa10.44□□□□□ -0.74
LINC02549-201ENST00000445346 EIF2S2P20042 333 aaKnown RBP10.44□□□□□ -0.74
LINC02549-201ENST00000445346 CXCL9Q07325 125 aa10.44□□□□□ -0.74
LINC02549-201ENST00000445346 TNIP1Q15025 636 aa10.44□□□□□ -0.74
LINC02549-201ENST00000445346 DPP8Q6V1X1 898 aaPredicted RBP10.44□□□□□ -0.74
LINC02549-201ENST00000445346 SAPCD2Q86UD0 394 aa10.44□□□□□ -0.74
LINC02549-201ENST00000445346 PNNQ9H307 717 aaKnown RBP10.44□□□□□ -0.74
LINC02549-201ENST00000445346 MAPK8IP3Q9UPT6 1336 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms