RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 LRRC24Q50LG9 513 aa10.8□□□□□ -0.68
FXR1-203ENST00000445140 RTL5Q5HYW3 569 aaPredicted RBP10.8□□□□□ -0.68
FXR1-203ENST00000445140 PA2G4Q9UQ80 394 aaKnown RBP10.8□□□□□ -0.68
FXR1-203ENST00000445140 CCDC93Q567U6 631 aa10.79□□□□□ -0.68
FXR1-203ENST00000445140 CLASRPQ8N2M8 674 aaKnown RBP10.79□□□□□ -0.68
FXR1-203ENST00000445140 CNNM1Q9NRU3 951 aa10.79□□□□□ -0.68
FXR1-203ENST00000445140 ARID4AP29374 1257 aaPredicted RBP10.79□□□□□ -0.68
FXR1-203ENST00000445140 PUS3Q9BZE2 481 aaKnown RBP10.79□□□□□ -0.68
FXR1-203ENST00000445140 CCDC88AQ3V6T2 1871 aa10.78□□□□□ -0.68
FXR1-203ENST00000445140 FKBP1AP62942 108 aaKnown RBP10.78□□□□□ -0.68
FXR1-203ENST00000445140 DALRD3Q5D0E6 543 aaKnown RBP10.78□□□□□ -0.68
FXR1-203ENST00000445140 ZNF594Q96JF6 807 aaPredicted RBP10.78□□□□□ -0.68
FXR1-203ENST00000445140 EXOC6BQ9Y2D4 811 aa10.78□□□□□ -0.68
FXR1-203ENST00000445140 CHMP3Q9Y3E7 222 aa10.78□□□□□ -0.68
FXR1-203ENST00000445140 EIF5BO60841 1220 aaKnown RBP10.78□□□□□ -0.68
FXR1-203ENST00000445140 SLC5A1P13866 664 aa10.78□□□□□ -0.68
FXR1-203ENST00000445140 TFCP2Q12800 502 aa10.78□□□□□ -0.68
FXR1-203ENST00000445140 METTL24Q5JXM2 366 aa10.78□□□□□ -0.68
FXR1-203ENST00000445140 SALL1Q9NSC2 1324 aa10.77□□□□□ -0.68
FXR1-203ENST00000445140 ZC3H4Q9UPT8 1303 aaKnown RBP10.77□□□□□ -0.68
FXR1-203ENST00000445140 MMP14P50281 582 aa10.77□□□□□ -0.69
FXR1-203ENST00000445140 ATP2B3Q16720 1220 aa10.77□□□□□ -0.69
FXR1-203ENST00000445140 FBXO33Q7Z6M2 555 aa10.77□□□□□ -0.69
FXR1-203ENST00000445140 EYA3Q99504 573 aa10.77□□□□□ -0.69
FXR1-203ENST00000445140 IFIT1P09914 478 aaKnown RBP10.77□□□□□ -0.69
FXR1-203ENST00000445140 CHRNA5P30532 468 aa10.77□□□□□ -0.69
FXR1-203ENST00000445140 UQCRFS1P1P0C7P4 283 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 ATP5JP18859 108 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 GPSM2P81274 684 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 FKBP4Q02790 459 aaKnown RBP eCLIP10.76□□□□□ -0.69
FXR1-203ENST00000445140 KLHDC4Q8TBB5 520 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 TBC1D16Q8TBP0 767 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 EAF2Q96CJ1 260 aaPredicted RBP10.76□□□□□ -0.69
FXR1-203ENST00000445140 GPATCH3Q96I76 525 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 TMX4Q9H1E5 349 aaPredicted RBP10.76□□□□□ -0.69
FXR1-203ENST00000445140 GGA1Q9UJY5 639 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 CHD4Q14839 1912 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 IL1R1P14778 569 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 SYT17Q9BSW7 474 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 FHDC1Q9C0D6 1143 aaPredicted RBP10.76□□□□□ -0.69
FXR1-203ENST00000445140 ECM29Q5VYK3 1845 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 FAM205AQ6ZU69 1335 aa10.76□□□□□ -0.69
FXR1-203ENST00000445140 A0A1B0GUL7 405 aa10.75□□□□□ -0.69
FXR1-203ENST00000445140 OS9Q13438 667 aaPredicted RBP10.75□□□□□ -0.69
FXR1-203ENST00000445140 CCDC24Q8N4L8 307 aa10.75□□□□□ -0.69
FXR1-203ENST00000445140 MPNDQ8N594 471 aa10.75□□□□□ -0.69
FXR1-203ENST00000445140 PDE4AP27815 886 aa10.75□□□□□ -0.69
FXR1-203ENST00000445140 KIAA2012Q0VF49 1180 aa10.75□□□□□ -0.69
FXR1-203ENST00000445140 B4GALNT3Q6L9W6 998 aa10.75□□□□□ -0.69
FXR1-203ENST00000445140 PLEKHM2Q8IWE5 1019 aa10.75□□□□□ -0.69
FXR1-203ENST00000445140 ZNF622Q969S3 477 aaKnown RBP eCLIP10.75□□□□□ -0.697e-7■□□□□ 9.9
FXR1-203ENST00000445140 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
FXR1-203ENST00000445140 A0A0G2JLW4 131 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 ANKRD45Q5TZF3 282 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 PI4K2BQ8TCG2 481 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 COA1Q9GZY4 146 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 ECHDC1Q9NTX5 307 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 SUGT1Q9Y2Z0 365 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 FOCADQ5VW36 1801 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 SCN9AQ15858 1988 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 ERC2O15083 957 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 GLRX3O76003 335 aaKnown RBP10.74□□□□□ -0.69
FXR1-203ENST00000445140 MX1P20591 662 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 PDE1AP54750 535 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 SIL1Q9H173 461 aa10.74□□□□□ -0.69
FXR1-203ENST00000445140 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
FXR1-203ENST00000445140 BMP2KLQ5H9B9 411 aa10.73□□□□□ -0.69
FXR1-203ENST00000445140 TDRD7Q8NHU6 1098 aaKnown RBP10.73□□□□□ -0.69
FXR1-203ENST00000445140 XAGE2Q96GT9 111 aa10.73□□□□□ -0.69
FXR1-203ENST00000445140 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.73□□□□□ -0.69
FXR1-203ENST00000445140 IFIT2P09913 472 aaKnown RBP10.73□□□□□ -0.69
FXR1-203ENST00000445140 DPP8Q6V1X1 898 aaPredicted RBP10.73□□□□□ -0.69
FXR1-203ENST00000445140 ZNF804AQ7Z570 1209 aa10.73□□□□□ -0.69
FXR1-203ENST00000445140 AACSQ86V21 672 aa10.73□□□□□ -0.69
FXR1-203ENST00000445140 NLGN2Q8NFZ4 835 aa10.73□□□□□ -0.69
FXR1-203ENST00000445140 CCDC85AQ96PX6 553 aaPredicted RBP10.73□□□□□ -0.69
FXR1-203ENST00000445140 POLLQ9UGP5 575 aa10.73□□□□□ -0.69
FXR1-203ENST00000445140 COL1A1P02452 1464 aaPredicted RBP10.73□□□□□ -0.69
FXR1-203ENST00000445140 COL4A5P29400 1685 aa10.73□□□□□ -0.69
FXR1-203ENST00000445140 HAUS7Q99871 368 aa10.72□□□□□ -0.69
FXR1-203ENST00000445140 GNL3LQ9NVN8 582 aaKnown RBP10.72□□□□□ -0.69
FXR1-203ENST00000445140 PODNQ7Z5L7 613 aa10.72□□□□□ -0.69
FXR1-203ENST00000445140 FAM84BQ96KN1 310 aaPredicted RBP10.72□□□□□ -0.69
FXR1-203ENST00000445140 NFKBIEO00221 500 aa10.71□□□□□ -0.69
FXR1-203ENST00000445140 UFL1O94874 794 aa10.71□□□□□ -0.69
FXR1-203ENST00000445140 CAVIN4Q5BKX8 364 aa10.71□□□□□ -0.69
FXR1-203ENST00000445140 CCDC158Q5M9N0 1113 aa10.71□□□□□ -0.69
FXR1-203ENST00000445140 TTC22Q5TAA0 569 aa10.71□□□□□ -0.69
FXR1-203ENST00000445140 PPP1R1BQ9UD71 204 aaPredicted RBP10.71□□□□□ -0.69
FXR1-203ENST00000445140 DENND2AQ9ULE3 1009 aa10.71□□□□□ -0.69
FXR1-203ENST00000445140 WDR90Q96KV7 1748 aa10.71□□□□□ -0.69
FXR1-203ENST00000445140 CCDC102BQ68D86 513 aa10.71□□□□□ -0.69
FXR1-203ENST00000445140 DBNDD2Q9BQY9 259 aa10.71□□□□□ -0.69
FXR1-203ENST00000445140 SNRKQ9NRH2 765 aa10.71□□□□□ -0.69
FXR1-203ENST00000445140 MYO5AQ9Y4I1 1855 aaKnown RBP10.71□□□□□ -0.7
FXR1-203ENST00000445140 DDX60LQ5H9U9 1706 aaKnown RBP10.71□□□□□ -0.7
FXR1-203ENST00000445140 GRIN3BO60391 1043 aa10.71□□□□□ -0.7
FXR1-203ENST00000445140 SPOCK2Q92563 424 aa10.71□□□□□ -0.7
FXR1-203ENST00000445140 MRIQ9BWK5 157 aa10.71□□□□□ -0.7
FXR1-203ENST00000445140 LNPKQ9C0E8 428 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms