RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 MXD3Q9BW11 206 aa19.74■□□□□ 0.75
SEC13-213ENST00000445064 SPEF2Q9C093 1822 aa19.74■□□□□ 0.75
SEC13-213ENST00000445064 MYH3P11055 1940 aa19.73■□□□□ 0.75
SEC13-213ENST00000445064 ITGA6P23229 1130 aa19.73■□□□□ 0.75
SEC13-213ENST00000445064 ZNF157P51786 506 aaPredicted RBP19.73■□□□□ 0.75
SEC13-213ENST00000445064 CASP7P55210 303 aa19.73■□□□□ 0.75
SEC13-213ENST00000445064 EXOSC9Q06265 439 aaKnown RBP19.73■□□□□ 0.75
SEC13-213ENST00000445064 TXNRD3Q86VQ6 643 aa19.73■□□□□ 0.75
SEC13-213ENST00000445064 WDR63Q8IWG1 891 aa19.73■□□□□ 0.75
SEC13-213ENST00000445064 CDCA5Q96FF9 252 aa19.73■□□□□ 0.75
SEC13-213ENST00000445064 PLA2G12BQ9BX93 195 aa19.73■□□□□ 0.75
SEC13-213ENST00000445064 SCAF8Q9UPN6 1271 aaKnown RBP19.73■□□□□ 0.75
SEC13-213ENST00000445064 MED23Q9ULK4 1368 aa19.72■□□□□ 0.75
SEC13-213ENST00000445064 ZNF609O15014 1411 aa19.72■□□□□ 0.75
SEC13-213ENST00000445064 CSF1RP07333 972 aa19.72■□□□□ 0.75
SEC13-213ENST00000445064 LINS1Q8NG48 757 aa19.72■□□□□ 0.75
SEC13-213ENST00000445064 FBXW7Q969H0 707 aa19.72■□□□□ 0.75
SEC13-213ENST00000445064 CCDC102AQ96A19 550 aa19.72■□□□□ 0.75
SEC13-213ENST00000445064 MYH16Q9H6N6 1097 aa19.72■□□□□ 0.75
SEC13-213ENST00000445064 LEMD3Q9Y2U8 911 aa19.72■□□□□ 0.75
SEC13-213ENST00000445064 PSME4Q14997 1843 aa19.72■□□□□ 0.75
SEC13-213ENST00000445064 KIF23Q02241 960 aaPredicted RBP19.71■□□□□ 0.75
SEC13-213ENST00000445064 FAM161AQ3B820 660 aa19.71■□□□□ 0.75
SEC13-213ENST00000445064 DACT2Q5SW24 774 aa19.71■□□□□ 0.75
SEC13-213ENST00000445064 MPHOSPH8Q99549 860 aa19.71■□□□□ 0.75
SEC13-213ENST00000445064 COA1Q9GZY4 146 aa19.71■□□□□ 0.75
SEC13-213ENST00000445064 ZNF316A6NFI3 1004 aaPredicted RBP19.7■□□□□ 0.74
SEC13-213ENST00000445064 NBPF9Q3BBW0 867 aa19.7■□□□□ 0.74
SEC13-213ENST00000445064 SPINK5Q9NQ38 1064 aaPredicted RBP19.7■□□□□ 0.74
SEC13-213ENST00000445064 ZNF804BA4D1E1 1349 aa19.7■□□□□ 0.74
SEC13-213ENST00000445064 CCDC85CA6NKD9 419 aa19.69■□□□□ 0.74
SEC13-213ENST00000445064 F6X3S4 739 aa19.69■□□□□ 0.74
SEC13-213ENST00000445064 KLRK1P26718 216 aa19.69■□□□□ 0.74
SEC13-213ENST00000445064 STRIP1Q5VSL9 837 aa19.69■□□□□ 0.74
SEC13-213ENST00000445064 ANKRD2Q9GZV1 360 aa19.69■□□□□ 0.74
SEC13-213ENST00000445064 ZEB1P37275 1124 aaPredicted RBP19.68■□□□□ 0.74
SEC13-213ENST00000445064 PRAMEF18Q5VWM3 479 aa19.68■□□□□ 0.74
SEC13-213ENST00000445064 OGFOD1Q8N543 542 aa19.68■□□□□ 0.74
SEC13-213ENST00000445064 CASP8AP2Q9UKL3 1982 aa19.67■□□□□ 0.74
SEC13-213ENST00000445064 ANKRD18BA2A2Z9 1011 aa19.67■□□□□ 0.74
SEC13-213ENST00000445064 FOXO4P98177 505 aa19.67■□□□□ 0.74
SEC13-213ENST00000445064 CHRNDQ07001 517 aa19.67■□□□□ 0.74
SEC13-213ENST00000445064 TTLL5Q6EMB2 1281 aa19.67■□□□□ 0.74
SEC13-213ENST00000445064 PITPNM2Q9BZ72 1349 aa19.67■□□□□ 0.74
SEC13-213ENST00000445064 SNAP23O00161 211 aa19.66■□□□□ 0.74
SEC13-213ENST00000445064 WNT10BO00744 389 aa19.66■□□□□ 0.74
SEC13-213ENST00000445064 SLC10A3P09131 477 aa19.66■□□□□ 0.74
SEC13-213ENST00000445064 KCNJ4P48050 445 aa19.66■□□□□ 0.74
SEC13-213ENST00000445064 GTF2IP78347 998 aa19.66■□□□□ 0.74
SEC13-213ENST00000445064 BEND3Q5T5X7 828 aa19.66■□□□□ 0.74
SEC13-213ENST00000445064 MOB2Q70IA6 237 aa19.66■□□□□ 0.74
SEC13-213ENST00000445064 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
SEC13-213ENST00000445064 HELBQ8NG08 1087 aaPredicted RBP19.66■□□□□ 0.74
SEC13-213ENST00000445064 CSRNP1Q96S65 589 aa19.66■□□□□ 0.74
SEC13-213ENST00000445064 MCOLN1Q9GZU1 580 aa19.66■□□□□ 0.74
SEC13-213ENST00000445064 TAF5LO75529 589 aa19.65■□□□□ 0.74
SEC13-213ENST00000445064 TRPA1O75762 1119 aa19.65■□□□□ 0.74
SEC13-213ENST00000445064 RNF186Q9NXI6 227 aa19.65■□□□□ 0.74
SEC13-213ENST00000445064 CHMP3Q9Y3E7 222 aa19.65■□□□□ 0.74
SEC13-213ENST00000445064 MYO3BQ8WXR4 1341 aa19.65■□□□□ 0.74
SEC13-213ENST00000445064 UBE2Q2LH0YL09 131 aa19.64■□□□□ 0.73
SEC13-213ENST00000445064 FKBP1BP68106 108 aa19.64■□□□□ 0.73
SEC13-213ENST00000445064 IFIT5Q13325 482 aaKnown RBP19.64■□□□□ 0.73
SEC13-213ENST00000445064 DGKZQ13574 1117 aa19.64■□□□□ 0.73
SEC13-213ENST00000445064 KIAA0825Q8IV33 1275 aa19.64■□□□□ 0.73
SEC13-213ENST00000445064 CACNA1FO60840 1977 aa19.64■□□□□ 0.73
SEC13-213ENST00000445064 ZNF646O15015 1829 aaPredicted RBP19.63■□□□□ 0.73
SEC13-213ENST00000445064 LMBR1LQ6UX01 489 aa19.63■□□□□ 0.73
SEC13-213ENST00000445064 RASAL3Q86YV0 1011 aa19.63■□□□□ 0.73
SEC13-213ENST00000445064 CD209Q9NNX6 404 aa19.63■□□□□ 0.73
SEC13-213ENST00000445064 SASH1O94885 1247 aa19.62■□□□□ 0.73
SEC13-213ENST00000445064 EPHA10Q5JZY3 1008 aa19.62■□□□□ 0.73
SEC13-213ENST00000445064 SAGE1Q9NXZ1 904 aa19.62■□□□□ 0.73
SEC13-213ENST00000445064 TTLL12Q14166 644 aaPredicted RBP19.61■□□□□ 0.73
SEC13-213ENST00000445064 ZNF594Q96JF6 807 aaPredicted RBP19.61■□□□□ 0.73
SEC13-213ENST00000445064 HDAC9Q9UKV0 1011 aa19.61■□□□□ 0.73
SEC13-213ENST00000445064 IRS2Q9Y4H2 1338 aa19.6■□□□□ 0.73
SEC13-213ENST00000445064 GRM8O00222 908 aa19.6■□□□□ 0.73
SEC13-213ENST00000445064 PLIN1O60240 522 aa19.6■□□□□ 0.73
SEC13-213ENST00000445064 MMP14P50281 582 aa19.6■□□□□ 0.73
SEC13-213ENST00000445064 CCDC57Q2TAC2 916 aa19.59■□□□□ 0.73
SEC13-213ENST00000445064 SLC4A10Q6U841 1118 aa19.59■□□□□ 0.73
SEC13-213ENST00000445064 LDHAL6AQ6ZMR3 332 aa19.59■□□□□ 0.73
SEC13-213ENST00000445064 C15orf52Q6ZUT6 534 aaKnown RBP19.59■□□□□ 0.73
SEC13-213ENST00000445064 C9orf78Q9NZ63 289 aaPredicted RBP19.59■□□□□ 0.73
SEC13-213ENST00000445064 PAPPA2Q9BXP8 1791 aa19.59■□□□□ 0.73
SEC13-213ENST00000445064 NF2P35240 595 aa19.58■□□□□ 0.72
SEC13-213ENST00000445064 PRKG1Q13976 671 aa19.58■□□□□ 0.72
SEC13-213ENST00000445064 TAF7LQ5H9L4 462 aa19.58■□□□□ 0.72
SEC13-213ENST00000445064 REM2Q8IYK8 340 aaPredicted RBP19.58■□□□□ 0.72
SEC13-213ENST00000445064 CERS5Q8N5B7 392 aa19.58■□□□□ 0.72
SEC13-213ENST00000445064 ZBED3Q96IU2 234 aaPredicted RBP19.58■□□□□ 0.72
SEC13-213ENST00000445064 AKAP11Q9UKA4 1901 aa19.57■□□□□ 0.72
SEC13-213ENST00000445064 CNNM1Q9NRU3 951 aa19.57■□□□□ 0.72
SEC13-213ENST00000445064 F8W031 263 aaPredicted RBP19.56■□□□□ 0.72
SEC13-213ENST00000445064 ALDH1L1O75891 902 aa19.56■□□□□ 0.72
SEC13-213ENST00000445064 IL1R1P14778 569 aa19.56■□□□□ 0.72
SEC13-213ENST00000445064 RGS19P49795 217 aa19.56■□□□□ 0.72
SEC13-213ENST00000445064 DLGAP5Q15398 846 aa19.56■□□□□ 0.72
SEC13-213ENST00000445064 ZNF804AQ7Z570 1209 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms