RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 FER1L6Q2WGJ9 1857 aa18.55■□□□□ 0.56
CCNE1-203ENST00000444983 MX1P20591 662 aa18.55■□□□□ 0.56
CCNE1-203ENST00000444983 PDE1AP54750 535 aa18.55■□□□□ 0.56
CCNE1-203ENST00000444983 NEUROD6Q96NK8 337 aa18.55■□□□□ 0.56
CCNE1-203ENST00000444983 SLC5A1P13866 664 aa18.54■□□□□ 0.56
CCNE1-203ENST00000444983 KLRK1P26718 216 aa18.54■□□□□ 0.56
CCNE1-203ENST00000444983 TMX4Q9H1E5 349 aaPredicted RBP18.54■□□□□ 0.56
CCNE1-203ENST00000444983 GGA1Q9UJY5 639 aa18.54■□□□□ 0.56
CCNE1-203ENST00000444983 TTC41PQ6P2S7 1318 aa18.54■□□□□ 0.56
CCNE1-203ENST00000444983 IFIT1P09914 478 aaKnown RBP18.54■□□□□ 0.56
CCNE1-203ENST00000444983 SOGA3Q5TF21 947 aa18.54■□□□□ 0.56
CCNE1-203ENST00000444983 DPP8Q6V1X1 898 aaPredicted RBP18.54■□□□□ 0.56
CCNE1-203ENST00000444983 TXNRD3Q86VQ6 643 aa18.54■□□□□ 0.56
CCNE1-203ENST00000444983 BCL11AQ9H165 835 aa18.54■□□□□ 0.56
CCNE1-203ENST00000444983 ZNF219Q9P2Y4 722 aaPredicted RBP18.54■□□□□ 0.56
CCNE1-203ENST00000444983 ZBTB22O15209 634 aa18.53■□□□□ 0.56
CCNE1-203ENST00000444983 UFL1O94874 794 aa18.53■□□□□ 0.56
CCNE1-203ENST00000444983 CCDC93Q567U6 631 aa18.53■□□□□ 0.56
CCNE1-203ENST00000444983 RTKN2Q8IZC4 609 aa18.53■□□□□ 0.56
CCNE1-203ENST00000444983 PI4K2BQ8TCG2 481 aa18.53■□□□□ 0.56
CCNE1-203ENST00000444983 ZNF512BQ96KM6 892 aaPredicted RBP18.53■□□□□ 0.56
CCNE1-203ENST00000444983 FAM84BQ96KN1 310 aaPredicted RBP18.53■□□□□ 0.56
CCNE1-203ENST00000444983 ECHDC1Q9NTX5 307 aa18.53■□□□□ 0.56
CCNE1-203ENST00000444983 BCS1LQ9Y276 419 aa18.53■□□□□ 0.56
CCNE1-203ENST00000444983 MED23Q9ULK4 1368 aa18.52■□□□□ 0.56
CCNE1-203ENST00000444983 KCNJ4P48050 445 aa18.52■□□□□ 0.56
CCNE1-203ENST00000444983 FBXO33Q7Z6M2 555 aa18.52■□□□□ 0.56
CCNE1-203ENST00000444983 PSMD1Q99460 953 aa18.52■□□□□ 0.56
CCNE1-203ENST00000444983 WWC3Q9ULE0 1092 aa18.52■□□□□ 0.56
CCNE1-203ENST00000444983 AOX1Q06278 1338 aa18.52■□□□□ 0.55
CCNE1-203ENST00000444983 RGS3P49796 1198 aa18.51■□□□□ 0.55
CCNE1-203ENST00000444983 CCDC102BQ68D86 513 aa18.51■□□□□ 0.55
CCNE1-203ENST00000444983 AKAP11Q9UKA4 1901 aa18.51■□□□□ 0.55
CCNE1-203ENST00000444983 ATP5JP18859 108 aa18.5■□□□□ 0.55
CCNE1-203ENST00000444983 BCAMP50895 628 aa18.5■□□□□ 0.55
CCNE1-203ENST00000444983 TSHZ3Q63HK5 1081 aa18.5■□□□□ 0.55
CCNE1-203ENST00000444983 GPR101Q96P66 508 aaPredicted RBP18.5■□□□□ 0.55
CCNE1-203ENST00000444983 C6orf229H3BNL8 230 aa18.5■□□□□ 0.55
CCNE1-203ENST00000444983 ARID4AP29374 1257 aaPredicted RBP18.5■□□□□ 0.55
CCNE1-203ENST00000444983 PHKA1P46020 1223 aa18.5■□□□□ 0.55
CCNE1-203ENST00000444983 GYG1P46976 350 aa18.5■□□□□ 0.55
CCNE1-203ENST00000444983 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.5■□□□□ 0.55
CCNE1-203ENST00000444983 UTRNP46939 3433 aa18.49■□□□□ 0.55
CCNE1-203ENST00000444983 CCDC158Q5M9N0 1113 aa18.49■□□□□ 0.55
CCNE1-203ENST00000444983 FKBP4Q02790 459 aaKnown RBP eCLIP18.48■□□□□ 0.55
CCNE1-203ENST00000444983 WASHC4Q2M389 1173 aa18.48■□□□□ 0.55
CCNE1-203ENST00000444983 CAVIN4Q5BKX8 364 aa18.48■□□□□ 0.55
CCNE1-203ENST00000444983 GPATCH3Q96I76 525 aa18.48■□□□□ 0.55
CCNE1-203ENST00000444983 LTBP3Q9NS15 1303 aa18.48■□□□□ 0.55
CCNE1-203ENST00000444983 NFKBIEO00221 500 aa18.47■□□□□ 0.55
CCNE1-203ENST00000444983 GLRX3O76003 335 aaKnown RBP18.47■□□□□ 0.55
CCNE1-203ENST00000444983 HIBADHP31937 336 aaKnown RBP18.47■□□□□ 0.55
CCNE1-203ENST00000444983 GORABQ5T7V8 394 aa18.47■□□□□ 0.55
CCNE1-203ENST00000444983 SUPT20HQ8NEM7 779 aa18.47■□□□□ 0.55
CCNE1-203ENST00000444983 EYA3Q99504 573 aa18.47■□□□□ 0.55
CCNE1-203ENST00000444983 VPS33BQ9H267 617 aa18.47■□□□□ 0.55
CCNE1-203ENST00000444983 ERC2O15083 957 aa18.47■□□□□ 0.55
CCNE1-203ENST00000444983 GSPT1P15170 499 aaKnown RBP18.47■□□□□ 0.55
CCNE1-203ENST00000444983 MCAMP43121 646 aa18.47■□□□□ 0.55
CCNE1-203ENST00000444983 KIAA2012Q0VF49 1180 aa18.47■□□□□ 0.55
CCNE1-203ENST00000444983 SCARF1Q14162 830 aa18.47■□□□□ 0.55
CCNE1-203ENST00000444983 TTC22Q5TAA0 569 aa18.47■□□□□ 0.55
CCNE1-203ENST00000444983 ZC3H12CQ9C0D7 883 aaKnown RBP18.47■□□□□ 0.55
CCNE1-203ENST00000444983 IL1R1P14778 569 aa18.46■□□□□ 0.55
CCNE1-203ENST00000444983 YBX3P16989 372 aaKnown RBP eCLIP18.46■□□□□ 0.55
CCNE1-203ENST00000444983 TTC39AQ5SRH9 613 aa18.46■□□□□ 0.55
CCNE1-203ENST00000444983 TDRD7Q8NHU6 1098 aaKnown RBP18.46■□□□□ 0.55
CCNE1-203ENST00000444983 CHD4Q14839 1912 aa18.46■□□□□ 0.55
CCNE1-203ENST00000444983 UQCRFS1P1P0C7P4 283 aa18.45■□□□□ 0.54
CCNE1-203ENST00000444983 RASGRF1Q13972 1273 aa18.45■□□□□ 0.54
CCNE1-203ENST00000444983 HAUS7Q99871 368 aa18.45■□□□□ 0.54
CCNE1-203ENST00000444983 CD209Q9NNX6 404 aa18.45■□□□□ 0.54
CCNE1-203ENST00000444983 RIMBP2O15034 1052 aa18.44■□□□□ 0.54
CCNE1-203ENST00000444983 SEMA3EO15041 775 aa18.44■□□□□ 0.54
CCNE1-203ENST00000444983 BMP2KLQ5H9B9 411 aa18.44■□□□□ 0.54
CCNE1-203ENST00000444983 ZNF804AQ7Z570 1209 aa18.44■□□□□ 0.54
CCNE1-203ENST00000444983 COA1Q9GZY4 146 aa18.44■□□□□ 0.54
CCNE1-203ENST00000444983 TAOK3Q9H2K8 898 aa18.44■□□□□ 0.54
CCNE1-203ENST00000444983 BOLA2Q9H3K6 86 aa18.44■□□□□ 0.54
CCNE1-203ENST00000444983 HMG20BQ9P0W2 317 aa18.44■□□□□ 0.54
CCNE1-203ENST00000444983 COL1A1P02452 1464 aaPredicted RBP18.44■□□□□ 0.54
CCNE1-203ENST00000444983 COL4A5P29400 1685 aa18.44■□□□□ 0.54
CCNE1-203ENST00000444983 MYH13Q9UKX3 1938 aa18.44■□□□□ 0.54
CCNE1-203ENST00000444983 PDS5AQ29RF7 1337 aaKnown RBP18.44■□□□□ 0.54
CCNE1-203ENST00000444983 VPS37DQ86XT2 251 aa18.44■□□□□ 0.54
CCNE1-203ENST00000444983 GNL3LQ9NVN8 582 aaKnown RBP18.44■□□□□ 0.54
CCNE1-203ENST00000444983 PRELPP51888 382 aa18.43■□□□□ 0.54
CCNE1-203ENST00000444983 AOC3Q16853 763 aa18.43■□□□□ 0.54
CCNE1-203ENST00000444983 PI16Q6UXB8 463 aa18.43■□□□□ 0.54
CCNE1-203ENST00000444983 ZNF277Q9NRM2 450 aaPredicted RBP18.43■□□□□ 0.54
CCNE1-203ENST00000444983 PODNQ7Z5L7 613 aa18.42■□□□□ 0.54
CCNE1-203ENST00000444983 SPATA5Q8NB90 893 aa18.42■□□□□ 0.54
CCNE1-203ENST00000444983 NDUFB9Q9Y6M9 179 aa18.42■□□□□ 0.54
CCNE1-203ENST00000444983 ZNF646O15015 1829 aaPredicted RBP18.42■□□□□ 0.54
CCNE1-203ENST00000444983 IARSP41252 1262 aaKnown RBP18.41■□□□□ 0.54
CCNE1-203ENST00000444983 DENND2AQ9ULE3 1009 aa18.41■□□□□ 0.54
CCNE1-203ENST00000444983 IQSEC3Q9UPP2 1182 aaPredicted RBP18.41■□□□□ 0.54
CCNE1-203ENST00000444983 SCN9AQ15858 1988 aa18.41■□□□□ 0.54
CCNE1-203ENST00000444983 SBF1O95248 1867 aa18.41■□□□□ 0.54
CCNE1-203ENST00000444983 PPIP5K2O43314 1243 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms