RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 EYA2O00167 538 aa25.47■■□□□ 1.67
SKIDA1-201ENST00000444772 ATF3P18847 181 aa25.47■■□□□ 1.67
SKIDA1-201ENST00000444772 APOBRQ0VD83 1088 aa25.47■■□□□ 1.67
SKIDA1-201ENST00000444772 CCAR1Q8IX12 1150 aaKnown RBP25.46■■□□□ 1.67
SKIDA1-201ENST00000444772 ZSCAN25Q6NSZ9 544 aa25.46■■□□□ 1.67
SKIDA1-201ENST00000444772 NBPF26B4DH59 902 aa25.45■■□□□ 1.67
SKIDA1-201ENST00000444772 IFIT1P09914 478 aaKnown RBP25.45■■□□□ 1.67
SKIDA1-201ENST00000444772 NBPF14Q5TI25 921 aa25.45■■□□□ 1.67
SKIDA1-201ENST00000444772 NBPF10Q6P3W6 841 aaKnown RBP25.45■■□□□ 1.67
SKIDA1-201ENST00000444772 ZNF710Q8N1W2 664 aa25.45■■□□□ 1.67
SKIDA1-201ENST00000444772 NBPF15Q8N660 670 aa25.45■■□□□ 1.67
SKIDA1-201ENST00000444772 CLIP2Q9UDT6 1046 aa25.45■■□□□ 1.67
SKIDA1-201ENST00000444772 CPDO75976 1380 aa25.45■■□□□ 1.66
SKIDA1-201ENST00000444772 EVCP57679 992 aa25.45■■□□□ 1.66
SKIDA1-201ENST00000444772 IQCB1Q15051 598 aa25.45■■□□□ 1.66
SKIDA1-201ENST00000444772 NUP188Q5SRE5 1749 aa25.45■■□□□ 1.66
SKIDA1-201ENST00000444772 NEMFO60524 1076 aa25.44■■□□□ 1.66
SKIDA1-201ENST00000444772 TIMM10P62072 90 aa25.44■■□□□ 1.66
SKIDA1-201ENST00000444772 MRFAP1L1Q96HT8 127 aa25.44■■□□□ 1.66
SKIDA1-201ENST00000444772 TNS3Q68CZ2 1445 aa25.44■■□□□ 1.66
SKIDA1-201ENST00000444772 PDIA3P30101 505 aaKnown RBP25.44■■□□□ 1.66
SKIDA1-201ENST00000444772 FAM160A1Q05DH4 1040 aa25.44■■□□□ 1.66
SKIDA1-201ENST00000444772 CTNNA3Q9UI47 895 aa25.44■■□□□ 1.66
SKIDA1-201ENST00000444772 MAST3O60307 1309 aa25.44■■□□□ 1.66
SKIDA1-201ENST00000444772 KINO60870 393 aaKnown RBP25.43■■□□□ 1.66
SKIDA1-201ENST00000444772 FBXO3Q9UK99 471 aa25.43■■□□□ 1.66
SKIDA1-201ENST00000444772 RIOK3O14730 519 aaKnown RBP25.42■■□□□ 1.66
SKIDA1-201ENST00000444772 CTIFO43310 598 aaKnown RBP25.42■■□□□ 1.66
SKIDA1-201ENST00000444772 USP28Q96RU2 1077 aa25.42■■□□□ 1.66
SKIDA1-201ENST00000444772 BCL2L12Q9HB09 334 aa25.42■■□□□ 1.66
SKIDA1-201ENST00000444772 TJP1Q07157 1748 aa25.42■■□□□ 1.66
SKIDA1-201ENST00000444772 SNW1Q13573 536 aaKnown RBP25.42■■□□□ 1.66
SKIDA1-201ENST00000444772 ENGASEQ8NFI3 743 aa25.42■■□□□ 1.66
SKIDA1-201ENST00000444772 ANO10Q9NW15 660 aa25.42■■□□□ 1.66
SKIDA1-201ENST00000444772 A0A1B0GUL7 405 aa25.41■■□□□ 1.66
SKIDA1-201ENST00000444772 ZFYP08048 801 aaPredicted RBP25.41■■□□□ 1.66
SKIDA1-201ENST00000444772 CEBPZQ03701 1054 aaKnown RBP25.41■■□□□ 1.66
SKIDA1-201ENST00000444772 ERVV-2B6SEH9 535 aa25.41■■□□□ 1.66
SKIDA1-201ENST00000444772 CCT2P78371 535 aaKnown RBP25.41■■□□□ 1.66
SKIDA1-201ENST00000444772 NRBP1Q9UHY1 535 aa25.4■■□□□ 1.66
SKIDA1-201ENST00000444772 CCDC9Q9Y3X0 531 aaKnown RBP25.4■■□□□ 1.66
SKIDA1-201ENST00000444772 PCDH11XQ9BZA7 1347 aa25.4■■□□□ 1.66
SKIDA1-201ENST00000444772 PCDH11YQ9BZA8 1340 aa25.4■■□□□ 1.66
SKIDA1-201ENST00000444772 UBR2Q8IWV8 1755 aa25.4■■□□□ 1.66
SKIDA1-201ENST00000444772 CARMIL3Q8ND23 1372 aa25.4■■□□□ 1.66
SKIDA1-201ENST00000444772 TTLL7Q6ZT98 887 aa25.4■■□□□ 1.66
SKIDA1-201ENST00000444772 LRMPQ12912 555 aa25.4■■□□□ 1.66
SKIDA1-201ENST00000444772 SMAP1Q8IYB5 467 aaPredicted RBP25.4■■□□□ 1.66
SKIDA1-201ENST00000444772 GOLPH3LQ9H4A5 285 aa25.4■■□□□ 1.66
SKIDA1-201ENST00000444772 CEP126Q9P2H0 1117 aa25.4■■□□□ 1.66
SKIDA1-201ENST00000444772 DHX16O60231 1041 aaKnown RBP25.39■■□□□ 1.66
SKIDA1-201ENST00000444772 CHRNA2Q15822 529 aa25.39■■□□□ 1.66
SKIDA1-201ENST00000444772 RTEL1Q9NZ71 1219 aa25.39■■□□□ 1.66
SKIDA1-201ENST00000444772 AKAP2Q9Y2D5 859 aa25.39■■□□□ 1.66
SKIDA1-201ENST00000444772 PAXBP1Q9Y5B6 917 aa25.39■■□□□ 1.66
SKIDA1-201ENST00000444772 SYCP1Q15431 976 aa25.39■■□□□ 1.65
SKIDA1-201ENST00000444772 LRRC24Q50LG9 513 aa25.39■■□□□ 1.65
SKIDA1-201ENST00000444772 NAT10Q9H0A0 1025 aaKnown RBP25.39■■□□□ 1.65
SKIDA1-201ENST00000444772 A0A1W2PQ27 194 aa25.38■■□□□ 1.65
SKIDA1-201ENST00000444772 A0A1W2PQ64 194 aa25.38■■□□□ 1.65
SKIDA1-201ENST00000444772 A0A1W2PQD8 194 aa25.38■■□□□ 1.65
SKIDA1-201ENST00000444772 BECN2A8MW95 431 aa25.38■■□□□ 1.65
SKIDA1-201ENST00000444772 ME1P48163 572 aa25.38■■□□□ 1.65
SKIDA1-201ENST00000444772 CCDC158Q5M9N0 1113 aa25.38■■□□□ 1.65
SKIDA1-201ENST00000444772 RGS22Q8NE09 1264 aa25.38■■□□□ 1.65
SKIDA1-201ENST00000444772 TSC1Q92574 1164 aa25.38■■□□□ 1.65
SKIDA1-201ENST00000444772 SMTNL1A8MU46 457 aa25.38■■□□□ 1.65
SKIDA1-201ENST00000444772 C11orf57Q6ZUT1 292 aaPredicted RBP25.38■■□□□ 1.65
SKIDA1-201ENST00000444772 NCOA5Q9HCD5 579 aaKnown RBP25.38■■□□□ 1.65
SKIDA1-201ENST00000444772 ABCC12Q96J65 1359 aa25.37■■□□□ 1.65
SKIDA1-201ENST00000444772 ADALQ6DHV7 355 aa25.37■■□□□ 1.65
SKIDA1-201ENST00000444772 CEP57L1Q8IYX8 460 aa25.37■■□□□ 1.65
SKIDA1-201ENST00000444772 FSIP1Q8NA03 581 aa25.37■■□□□ 1.65
SKIDA1-201ENST00000444772 CACTINQ8WUQ7 758 aaKnown RBP25.37■■□□□ 1.65
SKIDA1-201ENST00000444772 IMMTQ16891 758 aaKnown RBP25.37■■□□□ 1.65
SKIDA1-201ENST00000444772 CABLES1Q8TDN4 633 aa25.37■■□□□ 1.65
SKIDA1-201ENST00000444772 ANKRD7Q92527 254 aa25.37■■□□□ 1.65
SKIDA1-201ENST00000444772 NAP1L2Q9ULW6 460 aaPredicted RBP25.37■■□□□ 1.65
SKIDA1-201ENST00000444772 SLFNL1Q499Z3 407 aa25.36■■□□□ 1.65
SKIDA1-201ENST00000444772 MRPS27Q92552 414 aaKnown RBP25.36■■□□□ 1.65
SKIDA1-201ENST00000444772 M0R2C6 588 aa25.36■■□□□ 1.65
SKIDA1-201ENST00000444772 ILDR1Q86SU0 546 aaPredicted RBP25.36■■□□□ 1.65
SKIDA1-201ENST00000444772 FTOQ9C0B1 505 aaKnown RBP eCLIP25.36■■□□□ 1.65
SKIDA1-201ENST00000444772 RBM6P78332 1123 aaKnown RBP25.35■■□□□ 1.65
SKIDA1-201ENST00000444772 LRRC8AQ8IWT6 810 aa25.35■■□□□ 1.65
SKIDA1-201ENST00000444772 SPATA31A3Q5VYP0 1347 aa25.35■■□□□ 1.65
SKIDA1-201ENST00000444772 KCPQ6ZWJ8 1503 aa25.35■■□□□ 1.65
SKIDA1-201ENST00000444772 CCDC57Q2TAC2 916 aa25.35■■□□□ 1.65
SKIDA1-201ENST00000444772 ZCRB1Q8TBF4 217 aaKnown RBP25.35■■□□□ 1.65
SKIDA1-201ENST00000444772 OSBP2Q969R2 916 aa25.35■■□□□ 1.65
SKIDA1-201ENST00000444772 WDR19Q8NEZ3 1342 aa25.35■■□□□ 1.65
SKIDA1-201ENST00000444772 FOSBP53539 338 aa25.34■■□□□ 1.65
SKIDA1-201ENST00000444772 FMR1NBQ8N0W7 255 aaPredicted RBP25.34■■□□□ 1.65
SKIDA1-201ENST00000444772 KCNG4Q8TDN1 519 aa25.34■■□□□ 1.65
SKIDA1-201ENST00000444772 ZNF594Q96JF6 807 aaPredicted RBP25.34■■□□□ 1.65
SKIDA1-201ENST00000444772 TNNT1P13805 278 aa25.34■■□□□ 1.65
SKIDA1-201ENST00000444772 FDPSP14324 419 aaKnown RBP25.34■■□□□ 1.65
SKIDA1-201ENST00000444772 NKX1-1Q15270 411 aaPredicted RBP25.34■■□□□ 1.65
SKIDA1-201ENST00000444772 CCDC144BQ3MJ40 725 aa25.34■■□□□ 1.65
SKIDA1-201ENST00000444772 TTC39AQ5SRH9 613 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms