RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 BRPF1P55201 1214 aaPredicted RBP28.06■■■□□ 2.08
LMBR1-211ENST00000444719 RSBN1LQ6PCB5 846 aaPredicted RBP28.06■■■□□ 2.08
LMBR1-211ENST00000444719 USP17L1Q7RTZ2 530 aa28.06■■■□□ 2.08
LMBR1-211ENST00000444719 FBXW7Q969H0 707 aa28.06■■■□□ 2.08
LMBR1-211ENST00000444719 TRPM7Q96QT4 1865 aa28.06■■■□□ 2.08
LMBR1-211ENST00000444719 ANKRD44Q8N8A2 993 aa28.05■■■□□ 2.08
LMBR1-211ENST00000444719 API5Q9BZZ5 524 aaKnown RBP28.05■■■□□ 2.08
LMBR1-211ENST00000444719 COA1Q9GZY4 146 aa28.05■■■□□ 2.08
LMBR1-211ENST00000444719 MKRN1Q9UHC7 482 aaKnown RBP28.05■■■□□ 2.08
LMBR1-211ENST00000444719 PUS3Q9BZE2 481 aaKnown RBP28.04■■■□□ 2.08
LMBR1-211ENST00000444719 RABL6Q3YEC7 729 aaPredicted RBP28.03■■■□□ 2.08
LMBR1-211ENST00000444719 MXD3Q9BW11 206 aa28.03■■■□□ 2.08
LMBR1-211ENST00000444719 AGBL3Q8NEM8 1001 aa28.02■■■□□ 2.08
LMBR1-211ENST00000444719 ZC3H15Q8WU90 426 aaKnown RBP28.02■■■□□ 2.08
LMBR1-211ENST00000444719 GLIS2Q9BZE0 524 aaPredicted RBP28.02■■■□□ 2.08
LMBR1-211ENST00000444719 PGAP2Q9UHJ9 254 aa28.02■■■□□ 2.08
LMBR1-211ENST00000444719 ZNF646O15015 1829 aaPredicted RBP28.02■■■□□ 2.08
LMBR1-211ENST00000444719 BCAR3O75815 825 aa28.01■■■□□ 2.07
LMBR1-211ENST00000444719 KIF16BQ96L93 1317 aa28■■■□□ 2.07
LMBR1-211ENST00000444719 JMYQ8N9B5 988 aa28■■■□□ 2.07
LMBR1-211ENST00000444719 GMLQ99445 158 aa28■■■□□ 2.07
LMBR1-211ENST00000444719 KIF4BQ2VIQ3 1234 aa27.99■■■□□ 2.07
LMBR1-211ENST00000444719 DACT2Q5SW24 774 aa27.99■■■□□ 2.07
LMBR1-211ENST00000444719 KLHDC4Q8TBB5 520 aa27.99■■■□□ 2.07
LMBR1-211ENST00000444719 FRAT1Q92837 279 aaPredicted RBP27.99■■■□□ 2.07
LMBR1-211ENST00000444719 IRS2Q9Y4H2 1338 aa27.98■■■□□ 2.07
LMBR1-211ENST00000444719 TTLL5Q6EMB2 1281 aa27.98■■■□□ 2.07
LMBR1-211ENST00000444719 CD209Q9NNX6 404 aa27.98■■■□□ 2.07
LMBR1-211ENST00000444719 ABT1Q9ULW3 272 aaKnown RBP27.98■■■□□ 2.07
LMBR1-211ENST00000444719 RIPOR2Q9Y4F9 1068 aa27.98■■■□□ 2.07
LMBR1-211ENST00000444719 USP17L8P0C7I0 530 aa27.97■■■□□ 2.07
LMBR1-211ENST00000444719 UBTFL1P0CB47 393 aaPredicted RBP27.97■■■□□ 2.07
LMBR1-211ENST00000444719 GTF2IP78347 998 aa27.97■■■□□ 2.07
LMBR1-211ENST00000444719 LRRC24Q50LG9 513 aa27.97■■■□□ 2.07
LMBR1-211ENST00000444719 STRIP1Q5VSL9 837 aa27.97■■■□□ 2.07
LMBR1-211ENST00000444719 CST9Q5W186 159 aa27.97■■■□□ 2.07
LMBR1-211ENST00000444719 USP48Q86UV5 1035 aa27.97■■■□□ 2.07
LMBR1-211ENST00000444719 ARHGAP45Q92619 1136 aa27.97■■■□□ 2.07
LMBR1-211ENST00000444719 ZNF280AP59817 542 aaPredicted RBP27.96■■■□□ 2.07
LMBR1-211ENST00000444719 DLK2Q6UY11 383 aa27.96■■■□□ 2.07
LMBR1-211ENST00000444719 C15orf52Q6ZUT6 534 aaKnown RBP27.96■■■□□ 2.07
LMBR1-211ENST00000444719 CDC37L1Q7L3B6 337 aa27.96■■■□□ 2.07
LMBR1-211ENST00000444719 TNNQ9UQP3 1299 aa27.96■■■□□ 2.07
LMBR1-211ENST00000444719 ZNF609O15014 1411 aa27.95■■■□□ 2.07
LMBR1-211ENST00000444719 PCNTO95613 3336 aa27.95■■■□□ 2.06
LMBR1-211ENST00000444719 ZNF408Q9H9D4 720 aa27.95■■■□□ 2.06
LMBR1-211ENST00000444719 CNTNAP1P78357 1384 aa27.95■■■□□ 2.06
LMBR1-211ENST00000444719 ASTN2O75129 1339 aaPredicted RBP27.94■■■□□ 2.06
LMBR1-211ENST00000444719 IPO8O15397 1037 aaKnown RBP27.94■■■□□ 2.06
LMBR1-211ENST00000444719 ZNF804AQ7Z570 1209 aa27.94■■■□□ 2.06
LMBR1-211ENST00000444719 DCPSQ96C86 337 aaKnown RBP27.94■■■□□ 2.06
LMBR1-211ENST00000444719 MYOZ2Q9NPC6 264 aa27.94■■■□□ 2.06
LMBR1-211ENST00000444719 ZBED9Q6R2W3 1325 aa27.93■■■□□ 2.06
LMBR1-211ENST00000444719 MROH5Q6ZUA9 1318 aa27.93■■■□□ 2.06
LMBR1-211ENST00000444719 CELF2O95319 508 aaKnown RBP27.93■■■□□ 2.06
LMBR1-211ENST00000444719 DEFB115Q30KQ5 88 aa27.93■■■□□ 2.06
LMBR1-211ENST00000444719 METTL24Q5JXM2 366 aa27.93■■■□□ 2.06
LMBR1-211ENST00000444719 KRT26Q7Z3Y9 468 aa27.93■■■□□ 2.06
LMBR1-211ENST00000444719 MEIS3Q99687 375 aa27.93■■■□□ 2.06
LMBR1-211ENST00000444719 TRIM27P14373 513 aa27.92■■■□□ 2.06
LMBR1-211ENST00000444719 UBE4AQ14139 1066 aa27.92■■■□□ 2.06
LMBR1-211ENST00000444719 SCARF1Q14162 830 aa27.92■■■□□ 2.06
LMBR1-211ENST00000444719 INTS3Q68E01 1043 aaKnown RBP27.92■■■□□ 2.06
LMBR1-211ENST00000444719 CLUAP1Q96AJ1 413 aa27.92■■■□□ 2.06
LMBR1-211ENST00000444719 GGA3Q9NZ52 723 aa27.92■■■□□ 2.06
LMBR1-211ENST00000444719 LRRFIP2Q9Y608 721 aaKnown RBP27.92■■■□□ 2.06
LMBR1-211ENST00000444719 VEGFBP49765 207 aa27.91■■■□□ 2.06
LMBR1-211ENST00000444719 ATF7IPQ6VMQ6 1270 aa27.91■■■□□ 2.06
LMBR1-211ENST00000444719 JAG2Q9Y219 1238 aa27.91■■■□□ 2.06
LMBR1-211ENST00000444719 MYO3BQ8WXR4 1341 aa27.91■■■□□ 2.06
LMBR1-211ENST00000444719 ADM5C9JUS6 153 aa27.9■■■□□ 2.06
LMBR1-211ENST00000444719 IL1R1P14778 569 aa27.9■■■□□ 2.06
LMBR1-211ENST00000444719 GYG1P46976 350 aa27.9■■■□□ 2.06
LMBR1-211ENST00000444719 RFX5P48382 616 aaPredicted RBP27.9■■■□□ 2.06
LMBR1-211ENST00000444719 KIAA0825Q8IV33 1275 aa27.9■■■□□ 2.06
LMBR1-211ENST00000444719 OGFOD1Q8N543 542 aa27.9■■■□□ 2.06
LMBR1-211ENST00000444719 RASSF10A6NK89 507 aa27.89■■■□□ 2.06
LMBR1-211ENST00000444719 ANGEL2Q5VTE6 544 aaKnown RBP27.89■■■□□ 2.06
LMBR1-211ENST00000444719 PTPN12Q05209 780 aaKnown RBP27.88■■■□□ 2.05
LMBR1-211ENST00000444719 PAXIP1Q6ZW49 1069 aaPredicted RBP27.88■■■□□ 2.05
LMBR1-211ENST00000444719 PDE8BO95263 885 aa27.87■■■□□ 2.05
LMBR1-211ENST00000444719 HIBADHP31937 336 aaKnown RBP27.87■■■□□ 2.05
LMBR1-211ENST00000444719 NBPF9Q3BBW0 867 aa27.87■■■□□ 2.05
LMBR1-211ENST00000444719 SULF1Q8IWU6 871 aa27.87■■■□□ 2.05
LMBR1-211ENST00000444719 FAM84BQ96KN1 310 aaPredicted RBP27.87■■■□□ 2.05
LMBR1-211ENST00000444719 SCAF8Q9UPN6 1271 aaKnown RBP27.87■■■□□ 2.05
LMBR1-211ENST00000444719 HDAC5Q9UQL6 1122 aa27.87■■■□□ 2.05
LMBR1-211ENST00000444719 GRM1Q13255 1194 aa27.86■■■□□ 2.05
LMBR1-211ENST00000444719 ZKSCAN2Q63HK3 967 aa27.86■■■□□ 2.05
LMBR1-211ENST00000444719 CERS5Q8N5B7 392 aa27.86■■■□□ 2.05
LMBR1-211ENST00000444719 VGLL2Q8N8G2 317 aa27.86■■■□□ 2.05
LMBR1-211ENST00000444719 SIL1Q9H173 461 aa27.86■■■□□ 2.05
LMBR1-211ENST00000444719 TLL2Q9Y6L7 1015 aa27.86■■■□□ 2.05
LMBR1-211ENST00000444719 EYA2O00167 538 aa27.85■■■□□ 2.05
LMBR1-211ENST00000444719 HDAC9Q9UKV0 1011 aa27.85■■■□□ 2.05
LMBR1-211ENST00000444719 F8W031 263 aaPredicted RBP27.84■■■□□ 2.05
LMBR1-211ENST00000444719 GNAI3P08754 354 aa27.84■■■□□ 2.05
LMBR1-211ENST00000444719 HSPA1AP0DMV8 641 aaKnown RBP27.84■■■□□ 2.05
LMBR1-211ENST00000444719 HSPA1BP0DMV9 641 aaKnown RBP27.84■■■□□ 2.05
LMBR1-211ENST00000444719 WNT10BO00744 389 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms