RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ZNF609O15014 1411 aa23.35■■□□□ 1.33
CCDC188-202ENST00000444532 AGBL3Q8NEM8 1001 aa23.35■■□□□ 1.33
CCDC188-202ENST00000444532 RIPOR2Q9Y4F9 1068 aa23.35■■□□□ 1.33
CCDC188-202ENST00000444532 PLIN1O60240 522 aa23.34■■□□□ 1.33
CCDC188-202ENST00000444532 RSBN1LQ6PCB5 846 aaPredicted RBP23.34■■□□□ 1.33
CCDC188-202ENST00000444532 DNAJC5GQ8N7S2 189 aa23.34■■□□□ 1.33
CCDC188-202ENST00000444532 ZC3H15Q8WU90 426 aaKnown RBP23.34■■□□□ 1.33
CCDC188-202ENST00000444532 PUS3Q9BZE2 481 aaKnown RBP23.34■■□□□ 1.33
CCDC188-202ENST00000444532 MROH5Q6ZUA9 1318 aa23.33■■□□□ 1.33
CCDC188-202ENST00000444532 KLRK1P26718 216 aa23.33■■□□□ 1.33
CCDC188-202ENST00000444532 ZKSCAN2Q63HK3 967 aa23.33■■□□□ 1.33
CCDC188-202ENST00000444532 PGAP2Q9UHJ9 254 aa23.33■■□□□ 1.33
CCDC188-202ENST00000444532 IRS2Q9Y4H2 1338 aa23.33■■□□□ 1.32
CCDC188-202ENST00000444532 SHTN1A0MZ66 631 aa23.32■■□□□ 1.32
CCDC188-202ENST00000444532 SNAP23O00161 211 aa23.32■■□□□ 1.32
CCDC188-202ENST00000444532 GNAI3P08754 354 aa23.32■■□□□ 1.32
CCDC188-202ENST00000444532 HTRA3P83110 453 aa23.32■■□□□ 1.32
CCDC188-202ENST00000444532 UBE4AQ14139 1066 aa23.32■■□□□ 1.32
CCDC188-202ENST00000444532 HIRAP54198 1017 aaPredicted RBP23.31■■□□□ 1.32
CCDC188-202ENST00000444532 STRIP1Q5VSL9 837 aa23.31■■□□□ 1.32
CCDC188-202ENST00000444532 GMLQ99445 158 aa23.31■■□□□ 1.32
CCDC188-202ENST00000444532 MEIS3Q99687 375 aa23.31■■□□□ 1.32
CCDC188-202ENST00000444532 CREBZFQ9NS37 354 aa23.31■■□□□ 1.32
CCDC188-202ENST00000444532 SAMD7Q7Z3H4 446 aa23.3■■□□□ 1.32
CCDC188-202ENST00000444532 ZNF804AQ7Z570 1209 aa23.3■■□□□ 1.32
CCDC188-202ENST00000444532 TRPM4Q8TD43 1214 aa23.3■■□□□ 1.32
CCDC188-202ENST00000444532 CD209Q9NNX6 404 aa23.3■■□□□ 1.32
CCDC188-202ENST00000444532 LRRFIP2Q9Y608 721 aaKnown RBP23.3■■□□□ 1.32
CCDC188-202ENST00000444532 RFX5P48382 616 aaPredicted RBP23.29■■□□□ 1.32
CCDC188-202ENST00000444532 ZNF280AP59817 542 aaPredicted RBP23.29■■□□□ 1.32
CCDC188-202ENST00000444532 LRRC24Q50LG9 513 aa23.29■■□□□ 1.32
CCDC188-202ENST00000444532 DACT2Q5SW24 774 aa23.29■■□□□ 1.32
CCDC188-202ENST00000444532 TTLL5Q6EMB2 1281 aa23.29■■□□□ 1.32
CCDC188-202ENST00000444532 CLUAP1Q96AJ1 413 aa23.29■■□□□ 1.32
CCDC188-202ENST00000444532 TNNQ9UQP3 1299 aa23.29■■□□□ 1.32
CCDC188-202ENST00000444532 MYO3BQ8WXR4 1341 aa23.29■■□□□ 1.32
CCDC188-202ENST00000444532 ZNF646O15015 1829 aaPredicted RBP23.29■■□□□ 1.32
CCDC188-202ENST00000444532 USP17L8P0C7I0 530 aa23.28■■□□□ 1.32
CCDC188-202ENST00000444532 IL1R1P14778 569 aa23.28■■□□□ 1.32
CCDC188-202ENST00000444532 TBC1D10BQ4KMP7 808 aaPredicted RBP23.28■■□□□ 1.32
CCDC188-202ENST00000444532 METTL24Q5JXM2 366 aa23.28■■□□□ 1.32
CCDC188-202ENST00000444532 KLHDC4Q8TBB5 520 aa23.28■■□□□ 1.32
CCDC188-202ENST00000444532 TMEM88BA6NKF7 163 aa23.27■■□□□ 1.32
CCDC188-202ENST00000444532 MMP14P50281 582 aa23.27■■□□□ 1.32
CCDC188-202ENST00000444532 PTPN12Q05209 780 aaKnown RBP23.27■■□□□ 1.32
CCDC188-202ENST00000444532 FBXW7Q969H0 707 aa23.27■■□□□ 1.32
CCDC188-202ENST00000444532 KLRG1Q96E93 195 aa23.27■■□□□ 1.32
CCDC188-202ENST00000444532 FBXO3Q9UK99 471 aa23.27■■□□□ 1.32
CCDC188-202ENST00000444532 PDE8BO95263 885 aa23.26■■□□□ 1.31
CCDC188-202ENST00000444532 GTF2IP78347 998 aa23.26■■□□□ 1.31
CCDC188-202ENST00000444532 KIF4BQ2VIQ3 1234 aa23.26■■□□□ 1.31
CCDC188-202ENST00000444532 RBM26Q5T8P6 1007 aaKnown RBP23.26■■□□□ 1.31
CCDC188-202ENST00000444532 VGLL2Q8N8G2 317 aa23.26■■□□□ 1.31
CCDC188-202ENST00000444532 EYA2O00167 538 aa23.25■■□□□ 1.31
CCDC188-202ENST00000444532 EGFRP00533 1210 aa23.25■■□□□ 1.31
CCDC188-202ENST00000444532 TMEM57Q8N5G2 664 aa23.25■■□□□ 1.31
CCDC188-202ENST00000444532 TRPM7Q96QT4 1865 aa23.24■■□□□ 1.31
CCDC188-202ENST00000444532 CDC37L1Q7L3B6 337 aa23.24■■□□□ 1.31
CCDC188-202ENST00000444532 FTSJ3Q8IY81 847 aaKnown RBP23.24■■□□□ 1.31
CCDC188-202ENST00000444532 DZIP1LQ8IYY4 767 aaKnown RBP23.24■■□□□ 1.31
CCDC188-202ENST00000444532 OGFOD1Q8N543 542 aa23.24■■□□□ 1.31
CCDC188-202ENST00000444532 CIAO1O76071 339 aa23.23■■□□□ 1.31
CCDC188-202ENST00000444532 GNAI2P04899 355 aa23.23■■□□□ 1.31
CCDC188-202ENST00000444532 HIBADHP31937 336 aaKnown RBP23.23■■□□□ 1.31
CCDC188-202ENST00000444532 FAM84BQ96KN1 310 aaPredicted RBP23.23■■□□□ 1.31
CCDC188-202ENST00000444532 MXD3Q9BW11 206 aa23.23■■□□□ 1.31
CCDC188-202ENST00000444532 MYOZ2Q9NPC6 264 aa23.23■■□□□ 1.31
CCDC188-202ENST00000444532 SASH1O94885 1247 aa23.22■■□□□ 1.31
CCDC188-202ENST00000444532 MTX1Q13505 466 aa23.22■■□□□ 1.31
CCDC188-202ENST00000444532 ATG9AQ7Z3C6 839 aa23.22■■□□□ 1.31
CCDC188-202ENST00000444532 DCPSQ96C86 337 aaKnown RBP23.22■■□□□ 1.31
CCDC188-202ENST00000444532 TRAF5O00463 557 aa23.21■■□□□ 1.31
CCDC188-202ENST00000444532 GYG1P46976 350 aa23.21■■□□□ 1.31
CCDC188-202ENST00000444532 FKBP1AP62942 108 aaKnown RBP23.21■■□□□ 1.31
CCDC188-202ENST00000444532 PUM3Q15397 648 aaKnown RBP23.21■■□□□ 1.31
CCDC188-202ENST00000444532 TDRD7Q8NHU6 1098 aaKnown RBP23.21■■□□□ 1.31
CCDC188-202ENST00000444532 GLIS2Q9BZE0 524 aaPredicted RBP23.21■■□□□ 1.31
CCDC188-202ENST00000444532 COPRSQ9NQ92 184 aa23.21■■□□□ 1.31
CCDC188-202ENST00000444532 POLR2AP24928 1970 aaKnown RBP23.21■■□□□ 1.31
CCDC188-202ENST00000444532 SCARF1Q14162 830 aa23.2■■□□□ 1.3
CCDC188-202ENST00000444532 CAVIN4Q5BKX8 364 aa23.2■■□□□ 1.3
CCDC188-202ENST00000444532 FBXO33Q7Z6M2 555 aa23.2■■□□□ 1.3
CCDC188-202ENST00000444532 JMYQ8N9B5 988 aa23.2■■□□□ 1.3
CCDC188-202ENST00000444532 SIL1Q9H173 461 aa23.2■■□□□ 1.3
CCDC188-202ENST00000444532 HDAC9Q9UKV0 1011 aa23.2■■□□□ 1.3
CCDC188-202ENST00000444532 FAM205AQ6ZU69 1335 aa23.19■■□□□ 1.3
CCDC188-202ENST00000444532 SRGAP3O43295 1099 aa23.19■■□□□ 1.3
CCDC188-202ENST00000444532 IFIT1P09914 478 aaKnown RBP23.19■■□□□ 1.3
CCDC188-202ENST00000444532 FGFR2P21802 821 aa23.19■■□□□ 1.3
CCDC188-202ENST00000444532 IL15P40933 162 aaPredicted RBP23.19■■□□□ 1.3
CCDC188-202ENST00000444532 FMR1Q06787 632 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCDC188-202ENST00000444532 CST9Q5W186 159 aa23.19■■□□□ 1.3
CCDC188-202ENST00000444532 USP48Q86UV5 1035 aa23.19■■□□□ 1.3
CCDC188-202ENST00000444532 VPS37DQ86XT2 251 aa23.19■■□□□ 1.3
CCDC188-202ENST00000444532 CEP126Q9P2H0 1117 aa23.19■■□□□ 1.3
CCDC188-202ENST00000444532 MS4A1P11836 297 aa23.18■■□□□ 1.3
CCDC188-202ENST00000444532 RLBP1P12271 317 aa23.18■■□□□ 1.3
CCDC188-202ENST00000444532 KRT26Q7Z3Y9 468 aa23.18■■□□□ 1.3
CCDC188-202ENST00000444532 KIAA0825Q8IV33 1275 aa23.18■■□□□ 1.3
CCDC188-202ENST00000444532 SLC5A1P13866 664 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms