RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
COMMD1-203ENST00000444166 COLQQ9Y215 455 aaPredicted RBP13.17□□□□□ -0.3
COMMD1-203ENST00000444166 MANSC4A6NHS7 340 aaPredicted RBP13.16□□□□□ -0.3
COMMD1-203ENST00000444166 WTIPA6NIX2 430 aaPredicted RBP13.16□□□□□ -0.3
COMMD1-203ENST00000444166 IGF2BP3O00425 579 aaKnown RBP eCLIP13.16□□□□□ -0.3
COMMD1-203ENST00000444166 CHL1O00533 1208 aa13.16□□□□□ -0.3
COMMD1-203ENST00000444166 ATP2B4P23634 1241 aa13.16□□□□□ -0.3
COMMD1-203ENST00000444166 INHBEP58166 350 aa13.16□□□□□ -0.3
COMMD1-203ENST00000444166 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
COMMD1-203ENST00000444166 ZBED3Q96IU2 234 aaPredicted RBP13.16□□□□□ -0.3
COMMD1-203ENST00000444166 MED23Q9ULK4 1368 aa13.16□□□□□ -0.3
COMMD1-203ENST00000444166 SASH1O94885 1247 aa13.15□□□□□ -0.3
COMMD1-203ENST00000444166 HOXB7P09629 217 aa13.15□□□□□ -0.3
COMMD1-203ENST00000444166 CAP1Q01518 475 aa13.15□□□□□ -0.3
COMMD1-203ENST00000444166 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
COMMD1-203ENST00000444166 CCDC152Q4G0S7 254 aa13.15□□□□□ -0.3
COMMD1-203ENST00000444166 OGFOD1Q8N543 542 aa13.15□□□□□ -0.3
COMMD1-203ENST00000444166 DBF4Q9UBU7 674 aaPredicted RBP13.15□□□□□ -0.3
COMMD1-203ENST00000444166 SSC5DA1L4H1 1573 aa13.15□□□□□ -0.3
COMMD1-203ENST00000444166 MYO3BQ8WXR4 1341 aa13.14□□□□□ -0.31
COMMD1-203ENST00000444166 ZBTB48P10074 688 aaPredicted RBP13.14□□□□□ -0.31
COMMD1-203ENST00000444166 HSP90B1P14625 803 aaKnown RBP13.14□□□□□ -0.31
COMMD1-203ENST00000444166 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
COMMD1-203ENST00000444166 MMP14P50281 582 aa13.14□□□□□ -0.31
COMMD1-203ENST00000444166 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
COMMD1-203ENST00000444166 PRKG1Q13976 671 aa13.14□□□□□ -0.31
COMMD1-203ENST00000444166 STRIP1Q5VSL9 837 aa13.14□□□□□ -0.31
COMMD1-203ENST00000444166 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
COMMD1-203ENST00000444166 CD99L2Q8TCZ2 262 aa13.14□□□□□ -0.31
COMMD1-203ENST00000444166 ERO1AQ96HE7 468 aa13.14□□□□□ -0.31
COMMD1-203ENST00000444166 HYPKQ9NX55 129 aa13.14□□□□□ -0.31
COMMD1-203ENST00000444166 ANGEL1Q9UNK9 670 aaKnown RBP13.14□□□□□ -0.31
COMMD1-203ENST00000444166 FZD1Q9UP38 647 aa13.14□□□□□ -0.31
COMMD1-203ENST00000444166 COL1A1P02452 1464 aaPredicted RBP13.14□□□□□ -0.31
COMMD1-203ENST00000444166 PCCAP05165 728 aaPredicted RBP13.13□□□□□ -0.31
COMMD1-203ENST00000444166 ANKRD18AQ8IVF6 992 aa13.13□□□□□ -0.31
COMMD1-203ENST00000444166 OTUD5Q96G74 571 aa13.13□□□□□ -0.31
COMMD1-203ENST00000444166 WNK4Q96J92 1243 aa13.13□□□□□ -0.31
COMMD1-203ENST00000444166 ZNF333Q96JL9 665 aa13.13□□□□□ -0.31
COMMD1-203ENST00000444166 CLMNQ96JQ2 1002 aa13.13□□□□□ -0.31
COMMD1-203ENST00000444166 PDE8AO60658 829 aa13.12□□□□□ -0.31
COMMD1-203ENST00000444166 CRHR2Q13324 411 aa13.12□□□□□ -0.31
COMMD1-203ENST00000444166 SLC10A4Q96EP9 437 aa13.12□□□□□ -0.31
COMMD1-203ENST00000444166 CCDC85AQ96PX6 553 aaPredicted RBP13.12□□□□□ -0.31
COMMD1-203ENST00000444166 EFCC1Q9HA90 598 aa13.12□□□□□ -0.31
COMMD1-203ENST00000444166 COL6A3P12111 3177 aa13.12□□□□□ -0.31
COMMD1-203ENST00000444166 UNCXA6NJT0 531 aa13.11□□□□□ -0.31
COMMD1-203ENST00000444166 TXNRD3Q86VQ6 643 aa13.11□□□□□ -0.31
COMMD1-203ENST00000444166 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
COMMD1-203ENST00000444166 COA1Q9GZY4 146 aa13.11□□□□□ -0.31
COMMD1-203ENST00000444166 DEFB129Q9H1M3 183 aa13.11□□□□□ -0.31
COMMD1-203ENST00000444166 MINPP1Q9UNW1 487 aa13.11□□□□□ -0.31
COMMD1-203ENST00000444166 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
COMMD1-203ENST00000444166 H0YGN5 161 aa13.1□□□□□ -0.31
COMMD1-203ENST00000444166 GJA5P36382 358 aa13.1□□□□□ -0.31
COMMD1-203ENST00000444166 SP3Q02447 781 aa13.1□□□□□ -0.31
COMMD1-203ENST00000444166 PTPN18Q99952 460 aa13.1□□□□□ -0.31
COMMD1-203ENST00000444166 TMEM106CQ9BVX2 250 aa13.1□□□□□ -0.31
COMMD1-203ENST00000444166 BSDC1Q9NW68 430 aaPredicted RBP13.1□□□□□ -0.31
COMMD1-203ENST00000444166 CCT4P50991 539 aaKnown RBP13.09□□□□□ -0.31
COMMD1-203ENST00000444166 DUSP27Q5VZP5 1158 aa13.09□□□□□ -0.31
COMMD1-203ENST00000444166 RIC3Q7Z5B4 369 aa13.09□□□□□ -0.31
COMMD1-203ENST00000444166 KIAA0825Q8IV33 1275 aa13.09□□□□□ -0.31
COMMD1-203ENST00000444166 JARID2Q92833 1246 aaPredicted RBP13.09□□□□□ -0.31
COMMD1-203ENST00000444166 CDC5LQ99459 802 aaKnown RBP13.09□□□□□ -0.31
COMMD1-203ENST00000444166 MYD88Q99836 296 aa13.09□□□□□ -0.31
COMMD1-203ENST00000444166 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
COMMD1-203ENST00000444166 PPP1R12BO60237 982 aaPredicted RBP13.08□□□□□ -0.32
COMMD1-203ENST00000444166 CTSWP56202 376 aa13.08□□□□□ -0.32
COMMD1-203ENST00000444166 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
COMMD1-203ENST00000444166 TTLL5Q6EMB2 1281 aa13.08□□□□□ -0.32
COMMD1-203ENST00000444166 MTMR14Q8NCE2 650 aa13.08□□□□□ -0.32
COMMD1-203ENST00000444166 FBXW7Q969H0 707 aa13.08□□□□□ -0.32
COMMD1-203ENST00000444166 CWC25Q9NXE8 425 aaPredicted RBP13.08□□□□□ -0.32
COMMD1-203ENST00000444166 PPP2R3BQ9Y5P8 575 aa13.08□□□□□ -0.32
COMMD1-203ENST00000444166 KLRK1P26718 216 aa13.07□□□□□ -0.32
COMMD1-203ENST00000444166 OTUD7BQ6GQQ9 843 aa13.07□□□□□ -0.32
COMMD1-203ENST00000444166 TTLL11Q8NHH1 800 aa13.07□□□□□ -0.32
COMMD1-203ENST00000444166 PHAXQ9H814 394 aaKnown RBP13.07□□□□□ -0.32
COMMD1-203ENST00000444166 LEMD3Q9Y2U8 911 aa13.07□□□□□ -0.32
COMMD1-203ENST00000444166 PTCH2Q9Y6C5 1203 aa13.07□□□□□ -0.32
COMMD1-203ENST00000444166 LAMA3Q16787 3333 aa13.07□□□□□ -0.32
COMMD1-203ENST00000444166 ZNF804BA4D1E1 1349 aa13.07□□□□□ -0.32
COMMD1-203ENST00000444166 SPEF2Q9C093 1822 aa13.06□□□□□ -0.32
COMMD1-203ENST00000444166 USP2O75604 605 aaPredicted RBP13.06□□□□□ -0.32
COMMD1-203ENST00000444166 SLC9C1Q4G0N8 1177 aa13.06□□□□□ -0.32
COMMD1-203ENST00000444166 CERS5Q8N5B7 392 aa13.06□□□□□ -0.32
COMMD1-203ENST00000444166 MS4A4AQ96JQ5 239 aa13.06□□□□□ -0.32
COMMD1-203ENST00000444166 GREM2Q9H772 168 aa13.06□□□□□ -0.32
COMMD1-203ENST00000444166 LAS1LQ9Y4W2 734 aaKnown RBP13.06□□□□□ -0.32
COMMD1-203ENST00000444166 ECM29Q5VYK3 1845 aa13.06□□□□□ -0.32
COMMD1-203ENST00000444166 DLL1O00548 723 aa13.05□□□□□ -0.32
COMMD1-203ENST00000444166 GTF2IP78347 998 aa13.05□□□□□ -0.32
COMMD1-203ENST00000444166 DLGAP5Q15398 846 aa13.05□□□□□ -0.32
COMMD1-203ENST00000444166 SUPT20HL1Q3ZLR7 823 aa13.05□□□□□ -0.32
COMMD1-203ENST00000444166 NBPF12Q5TAG4 269 aaPredicted RBP13.05□□□□□ -0.32
COMMD1-203ENST00000444166 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
COMMD1-203ENST00000444166 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
COMMD1-203ENST00000444166 METTL22Q9BUU2 404 aaPredicted RBP13.05□□□□□ -0.32
COMMD1-203ENST00000444166 PRO3102Q9H379 93 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms