RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 CEBPZQ03701 1054 aaKnown RBP16.52■□□□□ 0.24
SMARCA4-204ENST00000444061 ERFEQ4G0M1 354 aa16.52■□□□□ 0.24
SMARCA4-204ENST00000444061 TTC6Q86TZ1 520 aa16.52■□□□□ 0.24
SMARCA4-204ENST00000444061 FBXO41Q8TF61 875 aa16.52■□□□□ 0.24
SMARCA4-204ENST00000444061 CNNM2Q9H8M5 875 aa16.52■□□□□ 0.24
SMARCA4-204ENST00000444061 CPDO75976 1380 aa16.52■□□□□ 0.23
SMARCA4-204ENST00000444061 GREM2Q9H772 168 aa16.52■□□□□ 0.23
SMARCA4-204ENST00000444061 DPY19L2Q6NUT2 758 aa16.51■□□□□ 0.23
SMARCA4-204ENST00000444061 TMC4Q7Z404 712 aa16.51■□□□□ 0.23
SMARCA4-204ENST00000444061 WDR33Q9C0J8 1336 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-204ENST00000444061 PPLO60437 1756 aa16.51■□□□□ 0.23
SMARCA4-204ENST00000444061 MCM5P33992 734 aa16.51■□□□□ 0.23
SMARCA4-204ENST00000444061 SH2B1Q9NRF2 756 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-204ENST00000444061 CCDC83Q8IWF9 413 aa16.51■□□□□ 0.23
SMARCA4-204ENST00000444061 BBOX1O75936 387 aa16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 CYP19A1P11511 503 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 GTF2IP78347 998 aa16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 PLEKHM2Q8IWE5 1019 aa16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 ANKRD20A12PQ8NF67 263 aa16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 ESYT1Q9BSJ8 1104 aa16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 KIF13AQ9H1H9 1805 aa16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 RBM8AQ9Y5S9 174 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 C3P01024 1663 aa16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 H7C1D1 291 aa16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 MBD4O95243 580 aa16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 CUL5Q93034 780 aa16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 FBXO3Q9UK99 471 aa16.5■□□□□ 0.23
SMARCA4-204ENST00000444061 PPEF1O14829 653 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 FIBPO43427 364 aa16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 ZBTB7AO95365 584 aa16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 SSH3Q8TE77 659 aa16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 KRT18P05783 430 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 PDIA4P13667 645 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 WTAPQ15007 396 aa16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 MICU3Q86XE3 530 aa16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 CHRNDQ07001 517 aa16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 TRMT2AQ8IZ69 625 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 ARHGEF1Q92888 912 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 VAT1LQ9HCJ6 419 aa16.49■□□□□ 0.23
SMARCA4-204ENST00000444061 COL15A1P39059 1388 aa16.48■□□□□ 0.23
SMARCA4-204ENST00000444061 ZNF521Q96K83 1311 aa16.48■□□□□ 0.23
SMARCA4-204ENST00000444061 SPATA5Q8NB90 893 aa16.48■□□□□ 0.23
SMARCA4-204ENST00000444061 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
SMARCA4-204ENST00000444061 DLGAP5Q15398 846 aa16.48■□□□□ 0.23
SMARCA4-204ENST00000444061 CERS3Q8IU89 383 aa16.48■□□□□ 0.23
SMARCA4-204ENST00000444061 TMTC2Q8N394 836 aa16.48■□□□□ 0.23
SMARCA4-204ENST00000444061 SSFA2P28290 1259 aa16.48■□□□□ 0.23
SMARCA4-204ENST00000444061 MFSD14BQ5SR56 506 aa16.48■□□□□ 0.23
SMARCA4-204ENST00000444061 XDHP47989 1333 aa16.47■□□□□ 0.23
SMARCA4-204ENST00000444061 CCT2P78371 535 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-204ENST00000444061 SUSD4Q5VX71 490 aa16.47■□□□□ 0.23
SMARCA4-204ENST00000444061 SASS6Q6UVJ0 657 aa16.47■□□□□ 0.23
SMARCA4-204ENST00000444061 IQGAP1P46940 1657 aa16.47■□□□□ 0.23
SMARCA4-204ENST00000444061 HMGN5P82970 282 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-204ENST00000444061 TMEM132AQ24JP5 1023 aa16.47■□□□□ 0.23
SMARCA4-204ENST00000444061 R3HCC1Q9Y3T6 440 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-204ENST00000444061 KINO60870 393 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-204ENST00000444061 KRT85P78386 507 aa16.47■□□□□ 0.23
SMARCA4-204ENST00000444061 SSRP1Q08945 709 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-204ENST00000444061 LRRC7Q96NW7 1537 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 HLFQ16534 295 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 IFIT1BQ5T764 474 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 RNF123Q5XPI4 1314 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 GYG1P46976 350 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 DOK7Q18PE1 504 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 LRRC24Q50LG9 513 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 ZNF804BA4D1E1 1349 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 CCDC171Q6TFL3 1326 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 NPR1P16066 1061 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 BRPF1P55201 1214 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 UBE4AQ14139 1066 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 C8orf76Q96K31 380 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 ZNF408Q9H9D4 720 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 HELLSQ9NRZ9 838 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 LEMD3Q9Y2U8 911 aa16.46■□□□□ 0.23
SMARCA4-204ENST00000444061 RAD50Q92878 1312 aa16.46■□□□□ 0.22
SMARCA4-204ENST00000444061 ME1P48163 572 aa16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 TSR1Q2NL82 804 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 DALRD3Q5D0E6 543 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 APPBP2Q92624 585 aa16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 COPRSQ9NQ92 184 aa16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 IARSP41252 1262 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 TNIP1Q15025 636 aa16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 CCDC144CPQ8IYA2 1237 aa16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 CCDC12Q8WUD4 166 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 SEC31BQ9NQW1 1179 aa16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 ZAP70P43403 619 aa16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 METAP2P50579 478 aaKnown RBP eCLIP16.45■□□□□ 0.229e-7■■□□□ 12.7
SMARCA4-204ENST00000444061 TTLL6Q8N841 843 aa16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 TTF2Q9UNY4 1162 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 CCDC93Q567U6 631 aa16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 TTLL5Q6EMB2 1281 aa16.45■□□□□ 0.22
SMARCA4-204ENST00000444061 PDE8BO95263 885 aa16.44■□□□□ 0.22
SMARCA4-204ENST00000444061 NLRP5P59047 1200 aa16.44■□□□□ 0.22
SMARCA4-204ENST00000444061 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
SMARCA4-204ENST00000444061 KBTBD3Q8NAB2 608 aa16.44■□□□□ 0.22
SMARCA4-204ENST00000444061 OTUD7AQ8TE49 926 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-204ENST00000444061 TRAF1Q13077 416 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms