RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 BPIFA3Q9BQP9 254 aa18.04■□□□□ 0.48
AP1S3-206ENST00000443700 TRPM3Q9HCF6 1732 aaPredicted RBP18.03■□□□□ 0.48
AP1S3-206ENST00000443700 A0A1W2PQ27 194 aa18.03■□□□□ 0.48
AP1S3-206ENST00000443700 A0A1W2PQ64 194 aa18.03■□□□□ 0.48
AP1S3-206ENST00000443700 A0A1W2PQD8 194 aa18.03■□□□□ 0.48
AP1S3-206ENST00000443700 GCP02774 474 aa18.03■□□□□ 0.48
AP1S3-206ENST00000443700 ME1P48163 572 aa18.03■□□□□ 0.48
AP1S3-206ENST00000443700 CCAR2Q8N163 923 aaKnown RBP18.03■□□□□ 0.48
AP1S3-206ENST00000443700 OSBPL5Q9H0X9 879 aaPredicted RBP18.03■□□□□ 0.48
AP1S3-206ENST00000443700 PLEKHG2Q9H7P9 1386 aa18.02■□□□□ 0.48
AP1S3-206ENST00000443700 KCNJ6P48051 423 aa18.02■□□□□ 0.48
AP1S3-206ENST00000443700 STOX1Q6ZVD7 989 aa18.02■□□□□ 0.48
AP1S3-206ENST00000443700 AOPEPQ8N6M6 819 aa18.02■□□□□ 0.48
AP1S3-206ENST00000443700 DBNDD2Q9BQY9 259 aa18.02■□□□□ 0.48
AP1S3-206ENST00000443700 RGPD5Q99666 1765 aa18.02■□□□□ 0.47
AP1S3-206ENST00000443700 CARMIL3Q8ND23 1372 aa18.02■□□□□ 0.47
AP1S3-206ENST00000443700 SLU7O95391 586 aaKnown RBP18.02■□□□□ 0.47
AP1S3-206ENST00000443700 CTDNEP1O95476 244 aa18.02■□□□□ 0.47
AP1S3-206ENST00000443700 MYL6BP14649 208 aa18.02■□□□□ 0.47
AP1S3-206ENST00000443700 EXOSC10Q01780 885 aaKnown RBP18.02■□□□□ 0.47
AP1S3-206ENST00000443700 APOBRQ0VD83 1088 aa18.02■□□□□ 0.47
AP1S3-206ENST00000443700 ESCO1Q5FWF5 840 aa18.02■□□□□ 0.47
AP1S3-206ENST00000443700 ANKRD13DQ6ZTN6 518 aa18.02■□□□□ 0.47
AP1S3-206ENST00000443700 COPS6Q7L5N1 327 aa18.02■□□□□ 0.47
AP1S3-206ENST00000443700 FILIP1Q7Z7B0 1213 aa18.02■□□□□ 0.47
AP1S3-206ENST00000443700 SLC52A2Q9HAB3 445 aa18.02■□□□□ 0.47
AP1S3-206ENST00000443700 DDX46Q7L014 1031 aaKnown RBP18.01■□□□□ 0.47
AP1S3-206ENST00000443700 KRT222Q8N1A0 295 aa18.01■□□□□ 0.47
AP1S3-206ENST00000443700 SEC62Q99442 399 aaKnown RBP18.01■□□□□ 0.47
AP1S3-206ENST00000443700 GPR108Q9NPR9 543 aa18.01■□□□□ 0.47
AP1S3-206ENST00000443700 RTEL1Q9NZ71 1219 aa18.01■□□□□ 0.47
AP1S3-206ENST00000443700 USP27XA6NNY8 438 aa18■□□□□ 0.47
AP1S3-206ENST00000443700 FAM193AP78312 1265 aa18■□□□□ 0.47
AP1S3-206ENST00000443700 ADALQ6DHV7 355 aa18■□□□□ 0.47
AP1S3-206ENST00000443700 ZNF771Q7L3S4 317 aaPredicted RBP18■□□□□ 0.47
AP1S3-206ENST00000443700 FMR1NBQ8N0W7 255 aaPredicted RBP18■□□□□ 0.47
AP1S3-206ENST00000443700 KCNG4Q8TDN1 519 aa18■□□□□ 0.47
AP1S3-206ENST00000443700 LRRC2Q9BYS8 371 aa18■□□□□ 0.47
AP1S3-206ENST00000443700 USP16Q9Y5T5 823 aa18■□□□□ 0.47
AP1S3-206ENST00000443700 DDX60Q8IY21 1712 aaKnown RBP18■□□□□ 0.47
AP1S3-206ENST00000443700 KDM6AO15550 1401 aaPredicted RBP18■□□□□ 0.47
AP1S3-206ENST00000443700 FBXL16Q8N461 479 aa17.99■□□□□ 0.47
AP1S3-206ENST00000443700 PAG1Q9NWQ8 432 aa17.99■□□□□ 0.47
AP1S3-206ENST00000443700 ZNF215Q9UL58 517 aaPredicted RBP17.99■□□□□ 0.47
AP1S3-206ENST00000443700 PSDA5PKW4 1024 aaPredicted RBP17.99■□□□□ 0.47
AP1S3-206ENST00000443700 E7EWF7 191 aa17.99■□□□□ 0.47
AP1S3-206ENST00000443700 CCP110O43303 1012 aa17.99■□□□□ 0.47
AP1S3-206ENST00000443700 YEATS4O95619 227 aa17.99■□□□□ 0.47
AP1S3-206ENST00000443700 FOSBP53539 338 aa17.99■□□□□ 0.47
AP1S3-206ENST00000443700 ARID5BQ14865 1188 aa17.99■□□□□ 0.47
AP1S3-206ENST00000443700 ZMYM1Q5SVZ6 1142 aa17.99■□□□□ 0.47
AP1S3-206ENST00000443700 UBE3BQ7Z3V4 1068 aa17.99■□□□□ 0.47
AP1S3-206ENST00000443700 CREBRFQ8IUR6 639 aa17.99■□□□□ 0.47
AP1S3-206ENST00000443700 FTOQ9C0B1 505 aaKnown RBP eCLIP17.99■□□□□ 0.47
AP1S3-206ENST00000443700 ZNF142P52746 1687 aaPredicted RBP17.98■□□□□ 0.47
AP1S3-206ENST00000443700 LRRFIP1Q32MZ4 808 aaKnown RBP17.98■□□□□ 0.47
AP1S3-206ENST00000443700 SDF4Q9BRK5 362 aa17.98■□□□□ 0.47
AP1S3-206ENST00000443700 SNRPA1P09661 255 aaKnown RBP17.97■□□□□ 0.47
AP1S3-206ENST00000443700 PDIA3P30101 505 aaKnown RBP17.97■□□□□ 0.47
AP1S3-206ENST00000443700 CCT2P78371 535 aaKnown RBP17.97■□□□□ 0.47
AP1S3-206ENST00000443700 STK38Q15208 465 aa17.97■□□□□ 0.47
AP1S3-206ENST00000443700 SF3A1Q15459 793 aaKnown RBP17.97■□□□□ 0.47
AP1S3-206ENST00000443700 BRAPQ7Z569 592 aa17.97■□□□□ 0.47
AP1S3-206ENST00000443700 RGS22Q8NE09 1264 aa17.97■□□□□ 0.47
AP1S3-206ENST00000443700 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
AP1S3-206ENST00000443700 PCDHA7Q9UN72 937 aa17.97■□□□□ 0.47
AP1S3-206ENST00000443700 DHX16O60231 1041 aaKnown RBP17.96■□□□□ 0.47
AP1S3-206ENST00000443700 TTC5Q8N0Z6 440 aa17.96■□□□□ 0.47
AP1S3-206ENST00000443700 POLR3EQ9NVU0 708 aa17.96■□□□□ 0.47
AP1S3-206ENST00000443700 KIAA1468Q9P260 1216 aa17.96■□□□□ 0.47
AP1S3-206ENST00000443700 NAP1L2Q9ULW6 460 aaPredicted RBP17.96■□□□□ 0.47
AP1S3-206ENST00000443700 NDUFB9Q9Y6M9 179 aa17.96■□□□□ 0.47
AP1S3-206ENST00000443700 PARP4Q9UKK3 1724 aaKnown RBP17.96■□□□□ 0.47
AP1S3-206ENST00000443700 A0A087WZG4 1122 aa17.96■□□□□ 0.47
AP1S3-206ENST00000443700 GOLIM4O00461 696 aa17.96■□□□□ 0.47
AP1S3-206ENST00000443700 SFPQP23246 707 aaKnown RBP eCLIP17.96■□□□□ 0.47
AP1S3-206ENST00000443700 EVCP57679 992 aa17.96■□□□□ 0.47
AP1S3-206ENST00000443700 NAA30Q147X3 362 aaPredicted RBP17.96■□□□□ 0.47
AP1S3-206ENST00000443700 KMT5BQ4FZB7 885 aa17.96■□□□□ 0.47
AP1S3-206ENST00000443700 ILDR1Q86SU0 546 aaPredicted RBP17.96■□□□□ 0.47
AP1S3-206ENST00000443700 ERBB3P21860 1342 aa17.96■□□□□ 0.47
AP1S3-206ENST00000443700 TJP1Q07157 1748 aa17.96■□□□□ 0.46
AP1S3-206ENST00000443700 NUP188Q5SRE5 1749 aa17.96■□□□□ 0.46
AP1S3-206ENST00000443700 PKD1L3Q7Z443 1732 aa17.96■□□□□ 0.46
AP1S3-206ENST00000443700 NLRP12P59046 1061 aa17.95■□□□□ 0.46
AP1S3-206ENST00000443700 MST1RQ04912 1400 aa17.95■□□□□ 0.46
AP1S3-206ENST00000443700 SLC39A6Q13433 755 aa17.95■□□□□ 0.46
AP1S3-206ENST00000443700 LRP10Q7Z4F1 713 aa17.95■□□□□ 0.46
AP1S3-206ENST00000443700 NBPF11Q86T75 865 aa17.95■□□□□ 0.46
AP1S3-206ENST00000443700 LINC00301Q8NCQ3 95 aa17.95■□□□□ 0.46
AP1S3-206ENST00000443700 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.95■□□□□ 0.46
AP1S3-206ENST00000443700 L2HGDHQ9H9P8 463 aa17.95■□□□□ 0.46
AP1S3-206ENST00000443700 TRMT1Q9NXH9 659 aaKnown RBP17.95■□□□□ 0.46
AP1S3-206ENST00000443700 TMEM94Q12767 1356 aa17.94■□□□□ 0.46
AP1S3-206ENST00000443700 MAST3O60307 1309 aa17.94■□□□□ 0.46
AP1S3-206ENST00000443700 RNF113AO15541 343 aaKnown RBP17.94■□□□□ 0.46
AP1S3-206ENST00000443700 SMC2O95347 1197 aa17.94■□□□□ 0.46
AP1S3-206ENST00000443700 HSPD1P10809 573 aaKnown RBP17.94■□□□□ 0.46
AP1S3-206ENST00000443700 TATP17735 454 aaPredicted RBP17.94■□□□□ 0.46
AP1S3-206ENST00000443700 ELF2Q15723 593 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms