RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 CAVIN4Q5BKX8 364 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 METTL24Q5JXM2 366 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 TTC39AQ5SRH9 613 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 GORABQ5T7V8 394 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 ATL3Q6DD88 541 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 CC2D2BQ6DHV5 1058 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 RUFY3Q7L099 469 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 SKAP1Q86WV1 359 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 NUTM1Q86Y26 1132 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 ANKRD18AQ8IVF6 992 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 FAM177A1Q8N128 213 aaPredicted RBP3.38□□□□□ -1.87
LINC00393-201ENST00000443621 TMTC2Q8N394 836 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 FBXO41Q8TF61 875 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 SLC16A10Q8TF71 515 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 APPBP2Q92624 585 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 ARHGEF1Q92888 912 aaKnown RBP3.38□□□□□ -1.87
LINC00393-201ENST00000443621 ACSBG1Q96GR2 724 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 TTC14Q96N46 770 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 GBP4Q96PP9 640 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 CRAMP1Q96RY5 1269 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 LLPHQ9BRT6 129 aaKnown RBP3.38□□□□□ -1.87
LINC00393-201ENST00000443621 FSD1Q9BTV5 496 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 MRIQ9BWK5 157 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 CCDC8Q9H0W5 538 aaPredicted RBP3.38□□□□□ -1.87
LINC00393-201ENST00000443621 VPS33BQ9H267 617 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 GREM2Q9H772 168 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 ANO2Q9NQ90 1003 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 CNNM1Q9NRU3 951 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 DENND2AQ9ULE3 1009 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 LIMCH1Q9UPQ0 1083 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 KIF3AQ9Y496 699 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 CYP46A1Q9Y6A2 500 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 LRRC37AA6NMS7 1700 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 CCDC88AQ3V6T2 1871 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 TNS1Q9HBL0 1735 aaKnown RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 GOLGA6L22H0YM25 854 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 APBB1O00213 710 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 GNPATO15228 680 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 DHX16O60231 1041 aaKnown RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 CYP2E1P05181 493 aaPredicted RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 HSP90AA1P07900 732 aaKnown RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 RXRBP28702 533 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 GTF2E1P29083 439 aaPredicted RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 ADD2P35612 726 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 PDE6BP35913 854 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 NEK4P51957 841 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 TIMM10P62072 90 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 FKBP1AP62942 108 aaKnown RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 ST5P78524 1137 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 HMGN5P82970 282 aaKnown RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 TXNRD1Q16881 649 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 IMMTQ16891 758 aaKnown RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 LRRC24Q50LG9 513 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 SPTY2D1Q68D10 685 aaPredicted RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 CCDC102BQ68D86 513 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 BLOC1S2Q6QNY1 142 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 CWC27Q6UX04 472 aaKnown RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 DDX46Q7L014 1031 aaKnown RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 FBXO33Q7Z6M2 555 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 NBPF5PQ86XG9 351 aaPredicted RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 TEX2Q8IWB9 1127 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 WDR66Q8TBY9 1149 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 ZNF274Q96GC6 653 aaPredicted RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 FAM163AQ96GL9 167 aaPredicted RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 NEUROD6Q96NK8 337 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 DBNDD2Q9BQY9 259 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 BRIP1Q9BX63 1249 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 SIL1Q9H173 461 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 BOLA2Q9H3K6 86 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 CNNM2Q9H8M5 875 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 BCL2L12Q9HB09 334 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 ANAPC4Q9UJX5 808 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 MINPP1Q9UNW1 487 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 CHMP3Q9Y3E7 222 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 RBM8AQ9Y5S9 174 aaKnown RBP3.37□□□□□ -1.87
LINC00393-201ENST00000443621 SNX14Q9Y5W7 946 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 MAST2Q6P0Q8 1798 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 LAMA4Q16363 1823 aa3.37□□□□□ -1.87
LINC00393-201ENST00000443621 MYH13Q9UKX3 1938 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 PATL2C9JE40 543 aaKnown RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 SLC27A2O14975 620 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 NPM3O75607 178 aaKnown RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 LDHCP07864 332 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 FGRP09769 529 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 HSPD1P10809 573 aaKnown RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 GYS1P13807 737 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 RPS6KB1P23443 525 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 ATP2B4P23634 1241 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 GPTP24298 496 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 PIP4K2AP48426 406 aaPredicted RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 PPP4CP60510 307 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 EXOSC10Q01780 885 aaKnown RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 CHRNDQ07001 517 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 NMIQ13287 307 aaPredicted RBP3.36□□□□□ -1.87
LINC00393-201ENST00000443621 GRAPQ13588 217 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 NFKBIBQ15653 356 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 CSPP1Q1MSJ5 1256 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 CCDC178Q5BJE1 867 aa3.36□□□□□ -1.87
LINC00393-201ENST00000443621 RTL5Q5HYW3 569 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms