RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 POTEJP0CG39 1038 aa16.05■□□□□ 0.16
PDLIM2-212ENST00000443561 ATP8B2P98198 1209 aa16.05■□□□□ 0.16
PDLIM2-212ENST00000443561 GPC2Q8N158 579 aa16.05■□□□□ 0.16
PDLIM2-212ENST00000443561 SSH3Q8TE77 659 aa16.05■□□□□ 0.16
PDLIM2-212ENST00000443561 MROH5Q6ZUA9 1318 aa16.04■□□□□ 0.16
PDLIM2-212ENST00000443561 CIAO1O76071 339 aa16.04■□□□□ 0.16
PDLIM2-212ENST00000443561 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-212ENST00000443561 PDE8BO95263 885 aa16.03■□□□□ 0.16
PDLIM2-212ENST00000443561 EIF6P56537 245 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-212ENST00000443561 METTL24Q5JXM2 366 aa16.03■□□□□ 0.16
PDLIM2-212ENST00000443561 IFFO2Q5TF58 517 aa16.03■□□□□ 0.16
PDLIM2-212ENST00000443561 CIAPIN1Q6FI81 312 aa16.03■□□□□ 0.16
PDLIM2-212ENST00000443561 MXD3Q9BW11 206 aa16.03■□□□□ 0.16
PDLIM2-212ENST00000443561 ZBTB12Q9Y330 459 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-212ENST00000443561 GJA3Q9Y6H8 435 aa16.03■□□□□ 0.16
PDLIM2-212ENST00000443561 SASH1O94885 1247 aa16.02■□□□□ 0.16
PDLIM2-212ENST00000443561 EPS15P42566 896 aa16.02■□□□□ 0.16
PDLIM2-212ENST00000443561 GMPSP49915 693 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-212ENST00000443561 UBE4AQ14139 1066 aa16.02■□□□□ 0.16
PDLIM2-212ENST00000443561 DPY19L2Q6NUT2 758 aa16.02■□□□□ 0.16
PDLIM2-212ENST00000443561 FAM84BQ96KN1 310 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-212ENST00000443561 GMLQ99445 158 aa16.02■□□□□ 0.16
PDLIM2-212ENST00000443561 CD209Q9NNX6 404 aa16.02■□□□□ 0.16
PDLIM2-212ENST00000443561 FBXO3Q9UK99 471 aa16.02■□□□□ 0.16
PDLIM2-212ENST00000443561 DDX19BQ9UMR2 479 aa16.02■□□□□ 0.16
PDLIM2-212ENST00000443561 EGFRP00533 1210 aa16.01■□□□□ 0.15
PDLIM2-212ENST00000443561 VIL1P09327 827 aaKnown RBP16.01■□□□□ 0.15
PDLIM2-212ENST00000443561 MS4A1P11836 297 aa16.01■□□□□ 0.15
PDLIM2-212ENST00000443561 GYG1P46976 350 aa16.01■□□□□ 0.15
PDLIM2-212ENST00000443561 COA1Q9GZY4 146 aa16.01■□□□□ 0.15
PDLIM2-212ENST00000443561 TAF1DQ9H5J8 278 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-212ENST00000443561 HDAC5Q9UQL6 1122 aa16.01■□□□□ 0.15
PDLIM2-212ENST00000443561 AKAP11Q9UKA4 1901 aa16■□□□□ 0.15
PDLIM2-212ENST00000443561 IL1R1P14778 569 aa16■□□□□ 0.15
PDLIM2-212ENST00000443561 ADORA1P30542 326 aa16■□□□□ 0.15
PDLIM2-212ENST00000443561 DACT2Q5SW24 774 aa16■□□□□ 0.15
PDLIM2-212ENST00000443561 FBXO33Q7Z6M2 555 aa16■□□□□ 0.15
PDLIM2-212ENST00000443561 CERS5Q8N5B7 392 aa16■□□□□ 0.15
PDLIM2-212ENST00000443561 CRBNQ96SW2 442 aa16■□□□□ 0.15
PDLIM2-212ENST00000443561 GPRC5DQ9NZD1 345 aa16■□□□□ 0.15
PDLIM2-212ENST00000443561 POLR2AP24928 1970 aaKnown RBP16■□□□□ 0.15
PDLIM2-212ENST00000443561 VEGFAP15692 232 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-212ENST00000443561 IL15P40933 162 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-212ENST00000443561 KCNJ4P48050 445 aa15.99■□□□□ 0.15
PDLIM2-212ENST00000443561 TFCP2Q12800 502 aa15.99■□□□□ 0.15
PDLIM2-212ENST00000443561 PODNQ7Z5L7 613 aa15.99■□□□□ 0.15
PDLIM2-212ENST00000443561 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-212ENST00000443561 TRPM4Q8TD43 1214 aa15.99■□□□□ 0.15
PDLIM2-212ENST00000443561 NOP58Q9Y2X3 529 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-212ENST00000443561 MYO5AQ9Y4I1 1855 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-212ENST00000443561 ECM29Q5VYK3 1845 aa15.98■□□□□ 0.15
PDLIM2-212ENST00000443561 HIRAP54198 1017 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-212ENST00000443561 PUM3Q15397 648 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-212ENST00000443561 TDRD7Q8NHU6 1098 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-212ENST00000443561 EPHX2P34913 555 aa15.97■□□□□ 0.15
PDLIM2-212ENST00000443561 BCAMP50895 628 aa15.97■□□□□ 0.15
PDLIM2-212ENST00000443561 GRIK5Q16478 980 aa15.97■□□□□ 0.15
PDLIM2-212ENST00000443561 ATP2B3Q16720 1220 aa15.97■□□□□ 0.15
PDLIM2-212ENST00000443561 RSBN1LQ6PCB5 846 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-212ENST00000443561 HACL1Q9UJ83 578 aa15.97■□□□□ 0.15
PDLIM2-212ENST00000443561 JAG2Q9Y219 1238 aa15.97■□□□□ 0.15
PDLIM2-212ENST00000443561 PCDHB15Q9Y5E8 787 aa15.97■□□□□ 0.15
PDLIM2-212ENST00000443561 USP17L3A6NCW0 530 aa15.96■□□□□ 0.15
PDLIM2-212ENST00000443561 USP17L4A6NCW7 530 aa15.96■□□□□ 0.15
PDLIM2-212ENST00000443561 TNIP1Q15025 636 aa15.96■□□□□ 0.15
PDLIM2-212ENST00000443561 USP17L1Q7RTZ2 530 aa15.96■□□□□ 0.15
PDLIM2-212ENST00000443561 IQSEC3Q9UPP2 1182 aaPredicted RBP15.96■□□□□ 0.15
PDLIM2-212ENST00000443561 FAM205AQ6ZU69 1335 aa15.95■□□□□ 0.14
PDLIM2-212ENST00000443561 PHKA1P46020 1223 aa15.95■□□□□ 0.14
PDLIM2-212ENST00000443561 GTF2IP78347 998 aa15.95■□□□□ 0.14
PDLIM2-212ENST00000443561 STRIP1Q5VSL9 837 aa15.95■□□□□ 0.14
PDLIM2-212ENST00000443561 ZNF804AQ7Z570 1209 aa15.95■□□□□ 0.14
PDLIM2-212ENST00000443561 MICALL2Q8IY33 904 aa15.95■□□□□ 0.14
PDLIM2-212ENST00000443561 LPIN2Q92539 896 aa15.95■□□□□ 0.14
PDLIM2-212ENST00000443561 DPF2Q92785 391 aa15.95■□□□□ 0.14
PDLIM2-212ENST00000443561 CEP126Q9P2H0 1117 aa15.95■□□□□ 0.14
PDLIM2-212ENST00000443561 EXOC6BQ9Y2D4 811 aa15.95■□□□□ 0.14
PDLIM2-212ENST00000443561 SUPT16HQ9Y5B9 1047 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-212ENST00000443561 ASTN2O75129 1339 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 A0A1B0GUL7 405 aa15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 TOMM70O94826 608 aa15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 HIBADHP31937 336 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 ZNF280AP59817 542 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 C1QTNF8P60827 252 aa15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 TIMM10P62072 90 aa15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 SAMD7Q7Z3H4 446 aa15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 RBM46Q8TBY0 533 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 CNOT7Q9UIV1 285 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 PCDHAC2Q9Y5I4 1007 aa15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 AOX1Q06278 1338 aa15.94■□□□□ 0.14
PDLIM2-212ENST00000443561 IQCA1LA6NCM1 817 aa15.93■□□□□ 0.14
PDLIM2-212ENST00000443561 SURF6O75683 361 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-212ENST00000443561 SLC5A1P13866 664 aa15.93■□□□□ 0.14
PDLIM2-212ENST00000443561 RPS12P25398 132 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-212ENST00000443561 TTLL5Q6EMB2 1281 aa15.93■□□□□ 0.14
PDLIM2-212ENST00000443561 RPAP2Q8IXW5 612 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-212ENST00000443561 AGBL3Q8NEM8 1001 aa15.93■□□□□ 0.14
PDLIM2-212ENST00000443561 TLR7Q9NYK1 1049 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-212ENST00000443561 TRPM7Q96QT4 1865 aa15.93■□□□□ 0.14
PDLIM2-212ENST00000443561 G3V3G9 751 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms