RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ICMTO60725 284 aa8.8□□□□□ -1
VPS50-206ENST00000443443 TRPA1O75762 1119 aa8.8□□□□□ -1
VPS50-206ENST00000443443 PTPRAP18433 802 aa8.8□□□□□ -1
VPS50-206ENST00000443443 FAM117BQ6P1L5 589 aa8.8□□□□□ -1
VPS50-206ENST00000443443 MAP4K3Q8IVH8 894 aa8.8□□□□□ -1
VPS50-206ENST00000443443 Q8N3U1 123 aa8.8□□□□□ -1
VPS50-206ENST00000443443 TP53INP1Q96A56 240 aa8.8□□□□□ -1
VPS50-206ENST00000443443 POP1Q99575 1024 aaKnown RBP8.8□□□□□ -1
VPS50-206ENST00000443443 TUT1Q9H6E5 874 aaKnown RBP8.8□□□□□ -1
VPS50-206ENST00000443443 TNFRSF21O75509 655 aa8.79□□□□□ -1
VPS50-206ENST00000443443 ACPPP15309 386 aa8.79□□□□□ -1
VPS50-206ENST00000443443 RSPO4Q2I0M5 234 aaPredicted RBP8.79□□□□□ -1
VPS50-206ENST00000443443 DCAF11Q8TEB1 546 aa8.79□□□□□ -1
VPS50-206ENST00000443443 SRA1Q9HD15 236 aaKnown RBP8.79□□□□□ -1
VPS50-206ENST00000443443 BRPF3Q9ULD4 1205 aa8.79□□□□□ -1
VPS50-206ENST00000443443 EREGO14944 169 aa8.78□□□□□ -1
VPS50-206ENST00000443443 ALX3O95076 343 aa8.78□□□□□ -1
VPS50-206ENST00000443443 NOS3P29474 1203 aa8.78□□□□□ -1
VPS50-206ENST00000443443 MRPL18Q9H0U6 180 aaKnown RBP8.78□□□□□ -1
VPS50-206ENST00000443443 CHRDQ9H2X0 955 aa8.78□□□□□ -1
VPS50-206ENST00000443443 EGFL7Q9UHF1 273 aa8.78□□□□□ -1
VPS50-206ENST00000443443 FOXD3Q9UJU5 478 aaPredicted RBP8.78□□□□□ -1
VPS50-206ENST00000443443 CABP4P57796 275 aa8.77□□□□□ -1.01
VPS50-206ENST00000443443 NKAPLQ5M9Q1 402 aa8.77□□□□□ -1.01
VPS50-206ENST00000443443 SNX29Q8TEQ0 813 aa8.77□□□□□ -1.01
VPS50-206ENST00000443443 CARD10Q9BWT7 1032 aa8.77□□□□□ -1.01
VPS50-206ENST00000443443 AKTIPQ9H8T0 292 aa8.77□□□□□ -1.01
VPS50-206ENST00000443443 DZANK1Q9NVP4 752 aa8.77□□□□□ -1.01
VPS50-206ENST00000443443 PDE2AO00408 941 aaPredicted RBP8.76□□□□□ -1.01
VPS50-206ENST00000443443 EPHA1P21709 976 aa8.76□□□□□ -1.01
VPS50-206ENST00000443443 ADAMTSL4Q6UY14 1074 aa8.76□□□□□ -1.01
VPS50-206ENST00000443443 GALNT11Q8NCW6 608 aa8.76□□□□□ -1.01
VPS50-206ENST00000443443 OSMRQ99650 979 aa8.76□□□□□ -1.01
VPS50-206ENST00000443443 FSCN2O14926 492 aa8.75□□□□□ -1.01
VPS50-206ENST00000443443 DYRK3O43781 588 aa8.75□□□□□ -1.01
VPS50-206ENST00000443443 EDN3P14138 238 aa8.75□□□□□ -1.01
VPS50-206ENST00000443443 CD68P34810 354 aaPredicted RBP8.75□□□□□ -1.01
VPS50-206ENST00000443443 GJD3Q8N144 294 aa8.75□□□□□ -1.01
VPS50-206ENST00000443443 HHIPQ96QV1 700 aa8.75□□□□□ -1.01
VPS50-206ENST00000443443 AGGF1Q8N302 714 aaeCLIP8.74□□□□□ -1.01
VPS50-206ENST00000443443 TMEM130Q8N3G9 435 aa8.74□□□□□ -1.01
VPS50-206ENST00000443443 CCER1Q8TC90 406 aaPredicted RBP8.74□□□□□ -1.01
VPS50-206ENST00000443443 TMC1Q8TDI8 760 aa8.74□□□□□ -1.01
VPS50-206ENST00000443443 SLC7A3Q8WY07 619 aa8.74□□□□□ -1.01
VPS50-206ENST00000443443 ADAM19Q9H013 955 aa8.74□□□□□ -1.01
VPS50-206ENST00000443443 AMOTL2Q9Y2J4 779 aa8.74□□□□□ -1.01
VPS50-206ENST00000443443 F8W735 103 aaPredicted RBP8.73□□□□□ -1.01
VPS50-206ENST00000443443 NFKBIEO00221 500 aa8.73□□□□□ -1.01
VPS50-206ENST00000443443 NDUFB5O43674 189 aa8.73□□□□□ -1.01
VPS50-206ENST00000443443 POLR3DP05423 398 aaPredicted RBP8.73□□□□□ -1.01
VPS50-206ENST00000443443 KLHL23Q8NBE8 558 aa8.73□□□□□ -1.01
VPS50-206ENST00000443443 ASAP3Q8TDY4 903 aa8.73□□□□□ -1.01
VPS50-206ENST00000443443 ZKSCAN3Q9BRR0 538 aa8.73□□□□□ -1.01
VPS50-206ENST00000443443 ZFYVE28Q9HCC9 887 aa8.73□□□□□ -1.01
VPS50-206ENST00000443443 SEC31BQ9NQW1 1179 aa8.73□□□□□ -1.01
VPS50-206ENST00000443443 H2AFB1P0C5Y9 115 aa8.72□□□□□ -1.01
VPS50-206ENST00000443443 H2AFB2P0C5Z0 115 aa8.72□□□□□ -1.01
VPS50-206ENST00000443443 GLB1P16278 677 aa8.72□□□□□ -1.01
VPS50-206ENST00000443443 DUOXA2Q1HG44 320 aa8.72□□□□□ -1.01
VPS50-206ENST00000443443 TXNDC2Q86VQ3 553 aa8.72□□□□□ -1.01
VPS50-206ENST00000443443 NXPE3Q969Y0 559 aa8.72□□□□□ -1.01
VPS50-206ENST00000443443 KLHDC7BQ96G42 594 aa8.72□□□□□ -1.01
VPS50-206ENST00000443443 MEGF10Q96KG7 1140 aa8.72□□□□□ -1.01
VPS50-206ENST00000443443 SSBP4Q9BWG4 385 aaPredicted RBP8.72□□□□□ -1.01
VPS50-206ENST00000443443 KCNK4Q9NYG8 393 aa8.72□□□□□ -1.01
VPS50-206ENST00000443443 H3BRJ5 948 aa8.71□□□□□ -1.02
VPS50-206ENST00000443443 DDX3YO15523 660 aaKnown RBP8.71□□□□□ -1.02
VPS50-206ENST00000443443 ARL4DP49703 201 aa8.71□□□□□ -1.02
VPS50-206ENST00000443443 ARHGAP4P98171 946 aa8.71□□□□□ -1.02
VPS50-206ENST00000443443 PRSS36Q5K4E3 855 aa8.71□□□□□ -1.02
VPS50-206ENST00000443443 ACAD11Q709F0 780 aa8.71□□□□□ -1.02
VPS50-206ENST00000443443 TMEM102Q8N9M5 508 aaPredicted RBP8.71□□□□□ -1.02
VPS50-206ENST00000443443 LATS2Q9NRM7 1088 aa8.71□□□□□ -1.02
VPS50-206ENST00000443443 NEFLP07196 543 aa8.7□□□□□ -1.02
VPS50-206ENST00000443443 PDE3BQ13370 1112 aa8.7□□□□□ -1.02
VPS50-206ENST00000443443 ECM1Q16610 540 aa8.7□□□□□ -1.02
VPS50-206ENST00000443443 FOXD4L6Q3SYB3 417 aaPredicted RBP8.7□□□□□ -1.02
VPS50-206ENST00000443443 FOXD4L3Q6VB84 417 aaPredicted RBP8.7□□□□□ -1.02
VPS50-206ENST00000443443 BSNDQ8WZ55 320 aa8.7□□□□□ -1.02
VPS50-206ENST00000443443 PIP4K2BP78356 416 aa8.69□□□□□ -1.02
VPS50-206ENST00000443443 ZMYM1Q5SVZ6 1142 aa8.69□□□□□ -1.02
VPS50-206ENST00000443443 WISP1O95388 367 aa8.68□□□□□ -1.02
VPS50-206ENST00000443443 NLRP12P59046 1061 aa8.68□□□□□ -1.02
VPS50-206ENST00000443443 IKBKEQ14164 716 aa8.68□□□□□ -1.02
VPS50-206ENST00000443443 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.68□□□□□ -1.02
VPS50-206ENST00000443443 BIN2Q9UBW5 565 aaPredicted RBP8.68□□□□□ -1.02
VPS50-206ENST00000443443 PEAR1Q5VY43 1037 aaPredicted RBP8.67□□□□□ -1.02
VPS50-206ENST00000443443 DZIP1LQ8IYY4 767 aaKnown RBP8.67□□□□□ -1.02
VPS50-206ENST00000443443 WNT8BQ93098 351 aa8.67□□□□□ -1.02
VPS50-206ENST00000443443 OSGEPQ9NPF4 335 aa8.67□□□□□ -1.02
VPS50-206ENST00000443443 SOX13Q9UN79 622 aa8.67□□□□□ -1.02
VPS50-206ENST00000443443 SOX1O00570 391 aaPredicted RBP8.66□□□□□ -1.02
VPS50-206ENST00000443443 C19orf57Q0VDD7 668 aa8.66□□□□□ -1.02
VPS50-206ENST00000443443 ORC1Q13415 861 aa8.66□□□□□ -1.02
VPS50-206ENST00000443443 USPL1Q5W0Q7 1092 aa8.66□□□□□ -1.02
VPS50-206ENST00000443443 UBASH3BQ8TF42 649 aa8.66□□□□□ -1.02
VPS50-206ENST00000443443 CITED4Q96RK1 184 aa8.66□□□□□ -1.02
VPS50-206ENST00000443443 METTL12A8MUP2 240 aa8.65□□□□□ -1.02
VPS50-206ENST00000443443 ADAM11O75078 769 aa8.65□□□□□ -1.02
VPS50-206ENST00000443443 BRD1O95696 1058 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms