RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 FOSBP53539 338 aa19.36■□□□□ 0.69
SEMA3B-207ENST00000441915 CCAR1Q8IX12 1150 aaKnown RBP19.36■□□□□ 0.69
SEMA3B-207ENST00000441915 A0A1B0GUL7 405 aa19.35■□□□□ 0.69
SEMA3B-207ENST00000441915 LRRC24Q50LG9 513 aa19.35■□□□□ 0.69
SEMA3B-207ENST00000441915 CCDC191Q8NCU4 936 aa19.35■□□□□ 0.69
SEMA3B-207ENST00000441915 TSC1Q92574 1164 aa19.35■□□□□ 0.69
SEMA3B-207ENST00000441915 ZNF274Q96GC6 653 aaPredicted RBP19.35■□□□□ 0.69
SEMA3B-207ENST00000441915 MAST3O60307 1309 aa19.35■□□□□ 0.69
SEMA3B-207ENST00000441915 ADAMTSL3P82987 1691 aa19.35■□□□□ 0.69
SEMA3B-207ENST00000441915 CCDC73Q6ZRK6 1079 aa19.35■□□□□ 0.69
SEMA3B-207ENST00000441915 ATG3Q9NT62 314 aa19.35■□□□□ 0.69
SEMA3B-207ENST00000441915 USP28Q96RU2 1077 aa19.34■□□□□ 0.69
SEMA3B-207ENST00000441915 CLIP2Q9UDT6 1046 aa19.34■□□□□ 0.69
SEMA3B-207ENST00000441915 NRBP1Q9UHY1 535 aa19.34■□□□□ 0.69
SEMA3B-207ENST00000441915 GLI3P10071 1580 aa19.34■□□□□ 0.69
SEMA3B-207ENST00000441915 PDIA3P30101 505 aaKnown RBP19.34■□□□□ 0.69
SEMA3B-207ENST00000441915 ZNF594Q96JF6 807 aaPredicted RBP19.34■□□□□ 0.69
SEMA3B-207ENST00000441915 ARID3AQ99856 593 aa19.34■□□□□ 0.69
SEMA3B-207ENST00000441915 FTOQ9C0B1 505 aaKnown RBP eCLIP19.34■□□□□ 0.69
SEMA3B-207ENST00000441915 NCOA5Q9HCD5 579 aaKnown RBP19.34■□□□□ 0.69
SEMA3B-207ENST00000441915 SALL1Q9NSC2 1324 aa19.34■□□□□ 0.69
SEMA3B-207ENST00000441915 CIAO1O76071 339 aa19.33■□□□□ 0.69
SEMA3B-207ENST00000441915 LRMPQ12912 555 aa19.33■□□□□ 0.69
SEMA3B-207ENST00000441915 STX1AQ16623 288 aa19.33■□□□□ 0.69
SEMA3B-207ENST00000441915 ZSCAN25Q6NSZ9 544 aa19.33■□□□□ 0.69
SEMA3B-207ENST00000441915 ZBTB3Q9H5J0 574 aa19.33■□□□□ 0.69
SEMA3B-207ENST00000441915 TMEM94Q12767 1356 aa19.33■□□□□ 0.69
SEMA3B-207ENST00000441915 KINO60870 393 aaKnown RBP19.33■□□□□ 0.68
SEMA3B-207ENST00000441915 LRRFIP1Q32MZ4 808 aaKnown RBP19.33■□□□□ 0.68
SEMA3B-207ENST00000441915 TNS3Q68CZ2 1445 aa19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 A1BGP04217 495 aa19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 CHST3Q7LGC8 479 aa19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 ZNF710Q8N1W2 664 aa19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 MYH15Q9Y2K3 1946 aa19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 A0A0G2JLW4 131 aa19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 RIOK3O14730 519 aaKnown RBP19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 CDC25BP30305 580 aa19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 IQCB1Q15051 598 aa19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 CEP126Q9P2H0 1117 aa19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 PCDH11XQ9BZA7 1347 aa19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 PCDH11YQ9BZA8 1340 aa19.32■□□□□ 0.68
SEMA3B-207ENST00000441915 ME1P48163 572 aa19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 SNW1Q13573 536 aaKnown RBP19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 CCDC94Q9BW85 323 aaPredicted RBP19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 GOLPH3LQ9H4A5 285 aa19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 PARP4Q9UKK3 1724 aaKnown RBP19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 FKBP4Q02790 459 aaKnown RBP eCLIP19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 FAM160A1Q05DH4 1040 aa19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 SARM1Q6SZW1 724 aa19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 BCL2L12Q9HB09 334 aa19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 CARMIL3Q8ND23 1372 aa19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 BECN2A8MW95 431 aa19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 GUCY1B3Q02153 619 aa19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 CCDC158Q5M9N0 1113 aa19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 FBXL16Q8N461 479 aa19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 CTNNA3Q9UI47 895 aa19.31■□□□□ 0.68
SEMA3B-207ENST00000441915 SPEF2Q9C093 1822 aa19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 ERVV-2B6SEH9 535 aa19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 M0R2C6 588 aa19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 PPFIA3O75145 1194 aa19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 GORABQ5T7V8 394 aa19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 C11orf57Q6ZUT1 292 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 ZCRB1Q8TBF4 217 aaKnown RBP19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 OSBP2Q969R2 916 aa19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 CPDO75976 1380 aa19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 FAM177BA6PVY3 158 aa19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 CCDC57Q2TAC2 916 aa19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 TTLL5Q6EMB2 1281 aa19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 ENGASEQ8NFI3 743 aa19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 PUS3Q9BZE2 481 aaKnown RBP19.3■□□□□ 0.68
SEMA3B-207ENST00000441915 FSIP1Q8NA03 581 aa19.29■□□□□ 0.68
SEMA3B-207ENST00000441915 ANO10Q9NW15 660 aa19.29■□□□□ 0.68
SEMA3B-207ENST00000441915 NUP188Q5SRE5 1749 aa19.29■□□□□ 0.68
SEMA3B-207ENST00000441915 TJP1Q07157 1748 aa19.29■□□□□ 0.68
SEMA3B-207ENST00000441915 DCCP43146 1447 aa19.29■□□□□ 0.68
SEMA3B-207ENST00000441915 IMMTQ16891 758 aaKnown RBP19.29■□□□□ 0.68
SEMA3B-207ENST00000441915 MRFAP1L1Q96HT8 127 aa19.29■□□□□ 0.68
SEMA3B-207ENST00000441915 AKAP2Q9Y2D5 859 aa19.29■□□□□ 0.68
SEMA3B-207ENST00000441915 SPATA31A3Q5VYP0 1347 aa19.28■□□□□ 0.68
SEMA3B-207ENST00000441915 ZFYP08048 801 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-207ENST00000441915 EVCP57679 992 aa19.28■□□□□ 0.68
SEMA3B-207ENST00000441915 WASHC4Q2M389 1173 aa19.28■□□□□ 0.68
SEMA3B-207ENST00000441915 TTC39AQ5SRH9 613 aa19.28■□□□□ 0.68
SEMA3B-207ENST00000441915 CACTINQ8WUQ7 758 aaKnown RBP19.28■□□□□ 0.68
SEMA3B-207ENST00000441915 C16orf45Q96MC5 204 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-207ENST00000441915 ILDR1Q86SU0 546 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-207ENST00000441915 CADPS2Q86UW7 1296 aa19.28■□□□□ 0.68
SEMA3B-207ENST00000441915 FDPSP14324 419 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-207ENST00000441915 CCDC144BQ3MJ40 725 aa19.27■□□□□ 0.68
SEMA3B-207ENST00000441915 CCDC144CPQ8IYA2 1237 aa19.27■□□□□ 0.68
SEMA3B-207ENST00000441915 DHX16O60231 1041 aaKnown RBP19.27■□□□□ 0.67
SEMA3B-207ENST00000441915 TOM1L2Q6ZVM7 507 aa19.27■□□□□ 0.67
SEMA3B-207ENST00000441915 FBXO3Q9UK99 471 aa19.27■□□□□ 0.67
SEMA3B-207ENST00000441915 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.26■□□□□ 0.67
SEMA3B-207ENST00000441915 ADALQ6DHV7 355 aa19.26■□□□□ 0.67
SEMA3B-207ENST00000441915 MRPS27Q92552 414 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-207ENST00000441915 RTEL1Q9NZ71 1219 aa19.26■□□□□ 0.67
SEMA3B-207ENST00000441915 CTIFO43310 598 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-207ENST00000441915 NEMFO60524 1076 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms