RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 CNPY2Q9Y2B0 182 aa9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 KIF3AQ9Y496 699 aa9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 TAF6LQ9Y6J9 622 aa9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 DDX60Q8IY21 1712 aaKnown RBP9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 SYCE3A1L190 88 aa9.71□□□□□ -0.85
SPIRE1-204ENST00000440472 HLFQ16534 295 aa9.71□□□□□ -0.85
SPIRE1-204ENST00000440472 PARP10Q53GL7 1025 aa9.71□□□□□ -0.85
SPIRE1-204ENST00000440472 NAA16Q6N069 864 aaPredicted RBP9.71□□□□□ -0.85
SPIRE1-204ENST00000440472 Q6ZUG5 572 aa9.71□□□□□ -0.85
SPIRE1-204ENST00000440472 NECAB1Q8N987 351 aa9.71□□□□□ -0.85
SPIRE1-204ENST00000440472 MROH5Q6ZUA9 1318 aa9.71□□□□□ -0.85
SPIRE1-204ENST00000440472 IRS4O14654 1257 aaPredicted RBP9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 UQCRFS1P1P0C7P4 283 aa9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 MCM5P33992 734 aa9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 ATP2B3Q16720 1220 aa9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 TAF7LQ5H9L4 462 aa9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 CCDC129Q6ZRS4 1044 aa9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 STOX1Q6ZVD7 989 aa9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 FAM89AQ96GI7 184 aa9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 CHAMP1Q96JM3 812 aa9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 ZBTB1Q9Y2K1 713 aa9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 ZMYM6O95789 1325 aa9.71□□□□□ -0.86
SPIRE1-204ENST00000440472 E7EWF7 191 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 FGFR2P21802 821 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 ITGA6P23229 1130 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 UBE3CQ15386 1083 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 SLIT2O94813 1529 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 SALL1Q9NSC2 1324 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 PHLPP1O60346 1717 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 ZBTB22O15209 634 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 PDE8BO95263 885 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 DNM1Q05193 864 aaKnown RBP9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 ALX1Q15699 326 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 GORABQ5T7V8 394 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 LDHAL6AQ6ZMR3 332 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 DZIP3Q86Y13 1208 aaKnown RBP9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 SMARCC1Q92922 1105 aaPredicted RBP9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 OSBP2Q969R2 916 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 LARP6Q9BRS8 491 aaKnown RBP9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 FUCA2Q9BTY2 467 aa9.7□□□□□ -0.86
SPIRE1-204ENST00000440472 SPATA31A5Q5VU36 1347 aa9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 SPATA31A7Q8IWB4 1347 aa9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 M0R2C6 588 aa9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 SLC34A2O95436 690 aa9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 ADORA1P30542 326 aa9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 COL9A3Q14050 684 aaPredicted RBP9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 METTL24Q5JXM2 366 aa9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 INTS5Q6P9B9 1019 aaKnown RBP9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 ZSCAN30Q86W11 494 aa9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 GREM2Q9H772 168 aa9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 CCDC87Q9NVE4 849 aa9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 TRMT112Q9UI30 125 aaKnown RBP9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 NDUFB9Q9Y6M9 179 aa9.69□□□□□ -0.86
SPIRE1-204ENST00000440472 BCORQ6W2J9 1755 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 VPS37CA5D8V6 355 aaPredicted RBP9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 ADD2P35612 726 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 RESTQ13127 1097 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 DDB1Q16531 1140 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 IMMTQ16891 758 aaKnown RBP9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 RBM43Q6ZSC3 357 aaKnown RBP9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 CDC37L1Q7L3B6 337 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 NSUN7Q8NE18 718 aaKnown RBP9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 LPIN2Q92539 896 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 ARXQ96QS3 562 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 GDPD2Q9HCC8 539 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 DOCK2Q92608 1830 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 COL5A3P25940 1745 aaPredicted RBP9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 FOXP2O15409 715 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 SCRN1Q12765 414 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 PUM3Q15397 648 aaKnown RBP9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 BRF1Q92994 677 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 NOL7Q9UMY1 257 aaKnown RBP9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 MYH15Q9Y2K3 1946 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 UBN2Q6ZU65 1347 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 CARMIL3Q8ND23 1372 aa9.68□□□□□ -0.86
SPIRE1-204ENST00000440472 ZAP70P43403 619 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 POTEAQ6S8J7 498 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 CLEC4GQ6UXB4 293 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 TTC6Q86TZ1 520 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 MB21D2Q8IYB1 491 aaPredicted RBP9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 RTN4Q9NQC3 1192 aaKnown RBP9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 CNNM1Q9NRU3 951 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 DDX19AQ9NUU7 478 aaKnown RBP9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 CFAP45Q9UL16 551 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 FIBPO43427 364 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 TOM1O60784 492 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 CAMTA2O94983 1202 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 CHGBP05060 677 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 PDIA3P30101 505 aaKnown RBP9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 MCAMP43121 646 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 PIP4K2BP78356 416 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 FKBP4Q02790 459 aaKnown RBP eCLIP9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 LEO1Q8WVC0 666 aaPredicted RBP9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 TCEANC2Q96MN5 208 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 UTP14AQ9BVJ6 771 aaKnown RBP9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
SPIRE1-204ENST00000440472 LOC102724428A0A0B4J2F2 783 aa9.66□□□□□ -0.86
SPIRE1-204ENST00000440472 DHX16O60231 1041 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms