RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 GRPEL1Q9HAV7 217 aa15.77■□□□□ 0.11
ACTN4-204ENST00000440400 TNS1Q9HBL0 1735 aaKnown RBP15.76■□□□□ 0.11
ACTN4-204ENST00000440400 ADCK5Q3MIX3 580 aa15.76■□□□□ 0.11
ACTN4-204ENST00000440400 METTL24Q5JXM2 366 aa15.76■□□□□ 0.11
ACTN4-204ENST00000440400 PRPF40BQ6NWY9 871 aaKnown RBP15.76■□□□□ 0.11
ACTN4-204ENST00000440400 LPIN2Q92539 896 aa15.76■□□□□ 0.11
ACTN4-204ENST00000440400 DDX11L8A8MPP1 907 aa15.76■□□□□ 0.11
ACTN4-204ENST00000440400 TRAK2O60296 914 aa15.76■□□□□ 0.11
ACTN4-204ENST00000440400 DDX46Q7L014 1031 aaKnown RBP15.76■□□□□ 0.11
ACTN4-204ENST00000440400 DNAJC2Q99543 621 aaKnown RBP15.76■□□□□ 0.11
ACTN4-204ENST00000440400 ZDHHC9Q9Y397 364 aa15.76■□□□□ 0.11
ACTN4-204ENST00000440400 MAST3O60307 1309 aa15.75■□□□□ 0.11
ACTN4-204ENST00000440400 GOLIM4O00461 696 aa15.75■□□□□ 0.11
ACTN4-204ENST00000440400 AK2P54819 239 aa15.75■□□□□ 0.11
ACTN4-204ENST00000440400 LRRFIP1Q32MZ4 808 aaKnown RBP15.75■□□□□ 0.11
ACTN4-204ENST00000440400 RNF20Q5VTR2 975 aa15.75■□□□□ 0.11
ACTN4-204ENST00000440400 SEPT12Q8IYM1 358 aa15.75■□□□□ 0.11
ACTN4-204ENST00000440400 ZGPATQ8N5A5 531 aaKnown RBP15.75■□□□□ 0.11
ACTN4-204ENST00000440400 PSMA5P28066 241 aa15.75■□□□□ 0.11
ACTN4-204ENST00000440400 SCARF1Q14162 830 aa15.75■□□□□ 0.11
ACTN4-204ENST00000440400 TTC39AQ5SRH9 613 aa15.75■□□□□ 0.11
ACTN4-204ENST00000440400 LIMCH1Q9UPQ0 1083 aa15.75■□□□□ 0.11
ACTN4-204ENST00000440400 UQCRFS1P1P0C7P4 283 aa15.74■□□□□ 0.11
ACTN4-204ENST00000440400 ADRA2BP18089 450 aa15.74■□□□□ 0.11
ACTN4-204ENST00000440400 MCAMP43121 646 aa15.74■□□□□ 0.11
ACTN4-204ENST00000440400 KRT32Q14532 448 aa15.74■□□□□ 0.11
ACTN4-204ENST00000440400 MEX3CQ5U5Q3 659 aaKnown RBP15.74■□□□□ 0.11
ACTN4-204ENST00000440400 FBXL16Q8N461 479 aa15.74■□□□□ 0.11
ACTN4-204ENST00000440400 NDUFB9Q9Y6M9 179 aa15.74■□□□□ 0.11
ACTN4-204ENST00000440400 FOXP2O15409 715 aa15.74■□□□□ 0.11
ACTN4-204ENST00000440400 ZKSCAN1P17029 563 aaPredicted RBP15.74■□□□□ 0.11
ACTN4-204ENST00000440400 ZSCAN31Q96LW9 406 aaPredicted RBP15.74■□□□□ 0.11
ACTN4-204ENST00000440400 QSER1Q2KHR3 1735 aa15.74■□□□□ 0.11
ACTN4-204ENST00000440400 TAF1P21675 1872 aa15.73■□□□□ 0.11
ACTN4-204ENST00000440400 LTBP1Q14766 1721 aa15.73■□□□□ 0.11
ACTN4-204ENST00000440400 HCLS1P14317 486 aaPredicted RBP15.73■□□□□ 0.11
ACTN4-204ENST00000440400 TBC1D9BQ66K14 1250 aa15.73■□□□□ 0.11
ACTN4-204ENST00000440400 UPF3BQ9BZI7 483 aaKnown RBP15.73■□□□□ 0.11
ACTN4-204ENST00000440400 NYXQ9GZU5 481 aa15.73■□□□□ 0.11
ACTN4-204ENST00000440400 CNNM1Q9NRU3 951 aa15.73■□□□□ 0.11
ACTN4-204ENST00000440400 CCNL1Q9UK58 526 aaPredicted RBP15.73■□□□□ 0.11
ACTN4-204ENST00000440400 ZNF804BA4D1E1 1349 aa15.73■□□□□ 0.11
ACTN4-204ENST00000440400 TULP1O00294 542 aaPredicted RBP15.73■□□□□ 0.11
ACTN4-204ENST00000440400 BRD1O95696 1058 aa15.73■□□□□ 0.11
ACTN4-204ENST00000440400 CASTP20810 708 aaKnown RBP15.73■□□□□ 0.11
ACTN4-204ENST00000440400 RPS6KB1P23443 525 aa15.73■□□□□ 0.11
ACTN4-204ENST00000440400 BBXQ8WY36 941 aaPredicted RBP15.73■□□□□ 0.11
ACTN4-204ENST00000440400 SH2B1Q9NRF2 756 aaPredicted RBP15.73■□□□□ 0.11
ACTN4-204ENST00000440400 CYP46A1Q9Y6A2 500 aa15.73■□□□□ 0.11
ACTN4-204ENST00000440400 ZMYM6O95789 1325 aa15.73■□□□□ 0.11
ACTN4-204ENST00000440400 TTF1Q15361 905 aaPredicted RBP15.73■□□□□ 0.11
ACTN4-204ENST00000440400 GBP4Q96PP9 640 aa15.73■□□□□ 0.11
ACTN4-204ENST00000440400 MYH13Q9UKX3 1938 aa15.72■□□□□ 0.11
ACTN4-204ENST00000440400 ERFEQ4G0M1 354 aa15.72■□□□□ 0.11
ACTN4-204ENST00000440400 SLC27A3Q5K4L6 730 aa15.72■□□□□ 0.11
ACTN4-204ENST00000440400 AMIGO3Q86WK7 504 aa15.72■□□□□ 0.11
ACTN4-204ENST00000440400 JAKMIP1Q96N16 626 aaKnown RBP15.72■□□□□ 0.11
ACTN4-204ENST00000440400 CACNA1SQ13698 1873 aa15.72■□□□□ 0.11
ACTN4-204ENST00000440400 CHGBP05060 677 aa15.72■□□□□ 0.11
ACTN4-204ENST00000440400 SEC62Q99442 399 aaKnown RBP15.72■□□□□ 0.11
ACTN4-204ENST00000440400 CDC5LQ99459 802 aaKnown RBP15.72■□□□□ 0.11
ACTN4-204ENST00000440400 AGXT2Q9BYV1 514 aa15.72■□□□□ 0.11
ACTN4-204ENST00000440400 PDRG1Q9NUG6 133 aa15.72■□□□□ 0.11
ACTN4-204ENST00000440400 TCRBV5S4A2TA0A5A2 114 aa15.71■□□□□ 0.11
ACTN4-204ENST00000440400 M0R2C6 588 aa15.71■□□□□ 0.11
ACTN4-204ENST00000440400 ST3GAL1Q11201 340 aa15.71■□□□□ 0.11
ACTN4-204ENST00000440400 CCDC102BQ68D86 513 aa15.71■□□□□ 0.11
ACTN4-204ENST00000440400 DUOX1Q9NRD9 1551 aa15.71■□□□□ 0.11
ACTN4-204ENST00000440400 ZAP70P43403 619 aa15.71■□□□□ 0.11
ACTN4-204ENST00000440400 APPBP2Q92624 585 aa15.71■□□□□ 0.11
ACTN4-204ENST00000440400 CCDC85AQ96PX6 553 aaPredicted RBP15.71■□□□□ 0.11
ACTN4-204ENST00000440400 SEC31BQ9NQW1 1179 aa15.71■□□□□ 0.11
ACTN4-204ENST00000440400 BSDC1Q9NW68 430 aaPredicted RBP15.71■□□□□ 0.11
ACTN4-204ENST00000440400 TAF6LQ9Y6J9 622 aa15.71■□□□□ 0.11
ACTN4-204ENST00000440400 PDS5AQ29RF7 1337 aaKnown RBP15.71■□□□□ 0.11
ACTN4-204ENST00000440400 UBE3CQ15386 1083 aa15.71■□□□□ 0.1
ACTN4-204ENST00000440400 SLC5A1P13866 664 aa15.7■□□□□ 0.1
ACTN4-204ENST00000440400 ADD2P35612 726 aa15.7■□□□□ 0.1
ACTN4-204ENST00000440400 ANKRD1Q15327 319 aa15.7■□□□□ 0.1
ACTN4-204ENST00000440400 C3orf67Q6ZVT6 689 aa15.7■□□□□ 0.1
ACTN4-204ENST00000440400 OSBP2Q969R2 916 aa15.7■□□□□ 0.1
ACTN4-204ENST00000440400 IRS2Q9Y4H2 1338 aa15.7■□□□□ 0.1
ACTN4-204ENST00000440400 CHD4Q14839 1912 aa15.7■□□□□ 0.1
ACTN4-204ENST00000440400 CYP21A2P08686 494 aa15.7■□□□□ 0.1
ACTN4-204ENST00000440400 HSPD1P10809 573 aaKnown RBP15.7■□□□□ 0.1
ACTN4-204ENST00000440400 TOB2Q14106 344 aaPredicted RBP15.7■□□□□ 0.1
ACTN4-204ENST00000440400 CCDC129Q6ZRS4 1044 aa15.7■□□□□ 0.1
ACTN4-204ENST00000440400 RTCBQ9Y3I0 505 aaKnown RBP15.7■□□□□ 0.1
ACTN4-204ENST00000440400 BAG4O95429 457 aaKnown RBP15.69■□□□□ 0.1
ACTN4-204ENST00000440400 ZSCAN25Q6NSZ9 544 aa15.69■□□□□ 0.1
ACTN4-204ENST00000440400 ARHGEF1Q92888 912 aaKnown RBP15.69■□□□□ 0.1
ACTN4-204ENST00000440400 CARMIL3Q8ND23 1372 aa15.69■□□□□ 0.1
ACTN4-204ENST00000440400 FAM196AQ6ZSG2 479 aa15.69■□□□□ 0.1
ACTN4-204ENST00000440400 LRRC4BQ9NT99 713 aa15.69■□□□□ 0.1
ACTN4-204ENST00000440400 R3HCC1Q9Y3T6 440 aaKnown RBP15.69■□□□□ 0.1
ACTN4-204ENST00000440400 IGHMBP2P38935 993 aaKnown RBP15.69■□□□□ 0.1
ACTN4-204ENST00000440400 QTRT2Q9H974 415 aaKnown RBP15.69■□□□□ 0.1
ACTN4-204ENST00000440400 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
ACTN4-204ENST00000440400 COL1A1P02452 1464 aaPredicted RBP15.68■□□□□ 0.1
ACTN4-204ENST00000440400 GNPATO15228 680 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms