RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 LMTK3Q96Q04 1460 aa12.98□□□□□ -0.33
STRC-203ENST00000440125 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
STRC-203ENST00000440125 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
STRC-203ENST00000440125 H0YHG0 523 aa12.97□□□□□ -0.33
STRC-203ENST00000440125 TOM1O60784 492 aa12.97□□□□□ -0.33
STRC-203ENST00000440125 IL15P40933 162 aaPredicted RBP12.97□□□□□ -0.33
STRC-203ENST00000440125 MAP3K12Q12852 859 aa12.97□□□□□ -0.33
STRC-203ENST00000440125 BABAM1Q9NWV8 329 aa12.97□□□□□ -0.33
STRC-203ENST00000440125 TRMT112Q9UI30 125 aaKnown RBP12.97□□□□□ -0.33
STRC-203ENST00000440125 STARD3NLO95772 234 aa12.97□□□□□ -0.33
STRC-203ENST00000440125 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.97□□□□□ -0.33
STRC-203ENST00000440125 ZBTB43O43298 467 aa12.97□□□□□ -0.33
STRC-203ENST00000440125 GCP02774 474 aa12.97□□□□□ -0.33
STRC-203ENST00000440125 RANBP6O60518 1105 aaKnown RBP12.96□□□□□ -0.33
STRC-203ENST00000440125 LARGE1O95461 756 aa12.96□□□□□ -0.33
STRC-203ENST00000440125 TNNI3KQ59H18 835 aa12.96□□□□□ -0.33
STRC-203ENST00000440125 FPGT-TNNI3KV9GXZ4 949 aa12.96□□□□□ -0.33
STRC-203ENST00000440125 AATKQ6ZMQ8 1374 aa12.96□□□□□ -0.33
STRC-203ENST00000440125 HOXB7P09629 217 aa12.96□□□□□ -0.33
STRC-203ENST00000440125 CDK5RAP3Q96JB5 506 aa12.96□□□□□ -0.33
STRC-203ENST00000440125 NUP88Q99567 741 aaPredicted RBP12.96□□□□□ -0.33
STRC-203ENST00000440125 RNF113AO15541 343 aaKnown RBP12.96□□□□□ -0.33
STRC-203ENST00000440125 EPS15P42566 896 aa12.96□□□□□ -0.33
STRC-203ENST00000440125 BEND3Q5T5X7 828 aa12.96□□□□□ -0.33
STRC-203ENST00000440125 NRBP1Q9UHY1 535 aa12.96□□□□□ -0.33
STRC-203ENST00000440125 ABCA6Q8N139 1617 aa12.96□□□□□ -0.34
STRC-203ENST00000440125 ANKRD18BA2A2Z9 1011 aa12.96□□□□□ -0.34
STRC-203ENST00000440125 AFMP43652 599 aa12.96□□□□□ -0.34
STRC-203ENST00000440125 CCDC181Q5TID7 509 aa12.96□□□□□ -0.34
STRC-203ENST00000440125 GTF3C6Q969F1 213 aa12.96□□□□□ -0.34
STRC-203ENST00000440125 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.34
STRC-203ENST00000440125 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.34
STRC-203ENST00000440125 SLC9C2Q5TAH2 1124 aa12.95□□□□□ -0.34
STRC-203ENST00000440125 ZFP91Q96JP5 570 aaPredicted RBP12.95□□□□□ -0.34
STRC-203ENST00000440125 SEC62Q99442 399 aaKnown RBP12.95□□□□□ -0.34
STRC-203ENST00000440125 KIDINS220Q9ULH0 1771 aa12.95□□□□□ -0.34
STRC-203ENST00000440125 ZFYP08048 801 aaPredicted RBP12.95□□□□□ -0.34
STRC-203ENST00000440125 LMAN1P49257 510 aa12.95□□□□□ -0.34
STRC-203ENST00000440125 ELF2Q15723 593 aa12.95□□□□□ -0.34
STRC-203ENST00000440125 NGLY1Q96IV0 654 aa12.95□□□□□ -0.34
STRC-203ENST00000440125 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
STRC-203ENST00000440125 ARHGEF10O15013 1369 aa12.95□□□□□ -0.34
STRC-203ENST00000440125 TANGO6Q9C0B7 1094 aa12.95□□□□□ -0.34
STRC-203ENST00000440125 KAT6BQ8WYB5 2073 aa12.95□□□□□ -0.34
STRC-203ENST00000440125 TET3O43151 1660 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 ATP2B3Q16720 1220 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 CLEC17AQ6ZS10 378 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 TMX4Q9H1E5 349 aaPredicted RBP12.94□□□□□ -0.34
STRC-203ENST00000440125 ARFGAP3Q9NP61 516 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 GLI2P10070 1586 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 GOLGA6L9A6NEM1 432 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 MCM6Q14566 821 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 CCDC148Q8NFR7 591 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 IGHMBP2P38935 993 aaKnown RBP12.94□□□□□ -0.34
STRC-203ENST00000440125 KARSQ15046 597 aaKnown RBP12.94□□□□□ -0.34
STRC-203ENST00000440125 ERO1AQ96HE7 468 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 PDLIM2Q96JY6 352 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 CRACR2AQ9BSW2 395 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 GBP3Q9H0R5 595 aa12.94□□□□□ -0.34
STRC-203ENST00000440125 MFSD6Q6ZSS7 791 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 TMEM94Q12767 1356 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 ROBO2Q9HCK4 1378 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 TIGD1Q96MW7 591 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 TSPYL1Q9H0U9 437 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 PATL2C9JE40 543 aaKnown RBP12.93□□□□□ -0.34
STRC-203ENST00000440125 N4BP3O15049 544 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 ARHGAP31Q2M1Z3 1444 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 SLAIN2Q9P270 581 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 PRR36Q9H6K5 1346 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 GCKRQ14397 625 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 USP28Q96RU2 1077 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 MRVI1Q9Y6F6 885 aa12.93□□□□□ -0.34
STRC-203ENST00000440125 NPHP4O75161 1426 aaPredicted RBP12.92□□□□□ -0.34
STRC-203ENST00000440125 STX17P56962 302 aa12.92□□□□□ -0.34
STRC-203ENST00000440125 KBTBD3Q8NAB2 608 aa12.92□□□□□ -0.34
STRC-203ENST00000440125 KIAA1524Q8TCG1 905 aa12.92□□□□□ -0.34
STRC-203ENST00000440125 ZNF594Q96JF6 807 aaPredicted RBP12.92□□□□□ -0.34
STRC-203ENST00000440125 METTL22Q9BUU2 404 aaPredicted RBP12.92□□□□□ -0.34
STRC-203ENST00000440125 A0A087WWV3 80 aa12.92□□□□□ -0.34
STRC-203ENST00000440125 SSBP05455 408 aaKnown RBP eCLIP12.92□□□□□ -0.34
STRC-203ENST00000440125 CTCFLQ8NI51 663 aaPredicted RBP12.92□□□□□ -0.34
STRC-203ENST00000440125 LLPHQ9BRT6 129 aaKnown RBP12.92□□□□□ -0.34
STRC-203ENST00000440125 CENPHQ9H3R5 247 aa12.92□□□□□ -0.34
STRC-203ENST00000440125 ZHX3Q9H4I2 956 aa12.92□□□□□ -0.34
STRC-203ENST00000440125 INO80Q9ULG1 1556 aaPredicted RBP12.92□□□□□ -0.34
STRC-203ENST00000440125 A2ML1A8K2U0 1454 aa12.92□□□□□ -0.34
STRC-203ENST00000440125 TTF1Q15361 905 aaPredicted RBP12.92□□□□□ -0.34
STRC-203ENST00000440125 BRAPQ7Z569 592 aa12.92□□□□□ -0.34
STRC-203ENST00000440125 IQCA1Q86XH1 822 aa12.92□□□□□ -0.34
STRC-203ENST00000440125 MAP4K1Q92918 833 aa12.92□□□□□ -0.34
STRC-203ENST00000440125 A0A1B0GUL7 405 aa12.91□□□□□ -0.34
STRC-203ENST00000440125 CYP2E1P05181 493 aaPredicted RBP12.91□□□□□ -0.34
STRC-203ENST00000440125 SLC5A1P13866 664 aa12.91□□□□□ -0.34
STRC-203ENST00000440125 ATL3Q6DD88 541 aa12.91□□□□□ -0.34
STRC-203ENST00000440125 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
STRC-203ENST00000440125 LZTFL1Q9NQ48 299 aa12.91□□□□□ -0.34
STRC-203ENST00000440125 TLR7Q9NYK1 1049 aaKnown RBP12.91□□□□□ -0.34
STRC-203ENST00000440125 PLEKHG1Q9ULL1 1385 aa12.91□□□□□ -0.34
STRC-203ENST00000440125 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms