RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 SLFNL1Q499Z3 407 aa13.52□□□□□ -0.25
SMPD4-209ENST00000439886 GOLGA6L1Q8N7Z2 621 aa13.52□□□□□ -0.25
SMPD4-209ENST00000439886 DEF6Q9H4E7 631 aa13.52□□□□□ -0.25
SMPD4-209ENST00000439886 PLEKHA4Q9H4M7 779 aa13.52□□□□□ -0.25
SMPD4-209ENST00000439886 CDC25BP30305 580 aa13.51□□□□□ -0.25
SMPD4-209ENST00000439886 CCDC12Q8WUD4 166 aaPredicted RBP13.51□□□□□ -0.25
SMPD4-209ENST00000439886 ORC3Q9UBD5 711 aaPredicted RBP13.51□□□□□ -0.25
SMPD4-209ENST00000439886 VWDEQ8N2E2 1590 aa13.51□□□□□ -0.25
SMPD4-209ENST00000439886 MYL6BP14649 208 aa13.51□□□□□ -0.25
SMPD4-209ENST00000439886 NDUFA8P51970 172 aa13.51□□□□□ -0.25
SMPD4-209ENST00000439886 FANCCQ00597 558 aa13.51□□□□□ -0.25
SMPD4-209ENST00000439886 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
SMPD4-209ENST00000439886 EDC4Q6P2E9 1401 aaKnown RBP13.51□□□□□ -0.25
SMPD4-209ENST00000439886 ZC3H13Q5T200 1668 aaKnown RBP13.51□□□□□ -0.25
SMPD4-209ENST00000439886 SCRN1Q12765 414 aa13.51□□□□□ -0.25
SMPD4-209ENST00000439886 MPRIPQ6WCQ1 1025 aa13.51□□□□□ -0.25
SMPD4-209ENST00000439886 DESI2Q9BSY9 194 aa13.51□□□□□ -0.25
SMPD4-209ENST00000439886 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
SMPD4-209ENST00000439886 USP32Q8NFA0 1604 aa13.5□□□□□ -0.25
SMPD4-209ENST00000439886 HAND2P61296 217 aa13.5□□□□□ -0.25
SMPD4-209ENST00000439886 E2F4Q16254 413 aa13.5□□□□□ -0.25
SMPD4-209ENST00000439886 RIC3Q7Z5B4 369 aa13.5□□□□□ -0.25
SMPD4-209ENST00000439886 LZTFL1Q9NQ48 299 aa13.5□□□□□ -0.25
SMPD4-209ENST00000439886 GJB4Q9NTQ9 266 aa13.5□□□□□ -0.25
SMPD4-209ENST00000439886 LCMT1Q9UIC8 334 aa13.5□□□□□ -0.25
SMPD4-209ENST00000439886 CALR3Q96L12 384 aaKnown RBP13.5□□□□□ -0.25
SMPD4-209ENST00000439886 PCDHA7Q9UN72 937 aa13.5□□□□□ -0.25
SMPD4-209ENST00000439886 MYO1CO00159 1063 aa13.49□□□□□ -0.25
SMPD4-209ENST00000439886 NOP2P46087 812 aaKnown RBP13.49□□□□□ -0.25
SMPD4-209ENST00000439886 EPB41L2O43491 1005 aaKnown RBP13.49□□□□□ -0.25
SMPD4-209ENST00000439886 RHOXF2BP0C7M4 288 aa13.49□□□□□ -0.25
SMPD4-209ENST00000439886 PPP2R3AQ06190 1150 aa13.49□□□□□ -0.25
SMPD4-209ENST00000439886 HSP90B2PQ58FF3 399 aa13.49□□□□□ -0.25
SMPD4-209ENST00000439886 RHOXF2Q9BQY4 288 aa13.49□□□□□ -0.25
SMPD4-209ENST00000439886 LGR6Q9HBX8 967 aa13.49□□□□□ -0.25
SMPD4-209ENST00000439886 H2AFXP16104 143 aaPredicted RBP13.49□□□□□ -0.25
SMPD4-209ENST00000439886 KRT32Q14532 448 aa13.49□□□□□ -0.25
SMPD4-209ENST00000439886 SARM1Q6SZW1 724 aa13.49□□□□□ -0.25
SMPD4-209ENST00000439886 OLFM4Q6UX06 510 aa13.49□□□□□ -0.25
SMPD4-209ENST00000439886 RABEP2Q9H5N1 569 aa13.49□□□□□ -0.25
SMPD4-209ENST00000439886 BTBD11A6QL63 1104 aa13.48□□□□□ -0.25
SMPD4-209ENST00000439886 PIP4K2AP48426 406 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-209ENST00000439886 POLA2Q14181 598 aa13.48□□□□□ -0.25
SMPD4-209ENST00000439886 WWC2Q6AWC2 1192 aa13.48□□□□□ -0.25
SMPD4-209ENST00000439886 CEP120Q8N960 986 aa13.48□□□□□ -0.25
SMPD4-209ENST00000439886 CCP110O43303 1012 aa13.48□□□□□ -0.25
SMPD4-209ENST00000439886 ARID4AP29374 1257 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-209ENST00000439886 ADKP55263 362 aaKnown RBP13.48□□□□□ -0.25
SMPD4-209ENST00000439886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-209ENST00000439886 ZSCAN12O43309 604 aa13.48□□□□□ -0.25
SMPD4-209ENST00000439886 C8orf76Q96K31 380 aa13.48□□□□□ -0.25
SMPD4-209ENST00000439886 BICC1Q9H694 974 aaKnown RBP13.48□□□□□ -0.25
SMPD4-209ENST00000439886 KIAA1468Q9P260 1216 aa13.48□□□□□ -0.25
SMPD4-209ENST00000439886 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
SMPD4-209ENST00000439886 DEPDC5O75140 1603 aa13.47□□□□□ -0.25
SMPD4-209ENST00000439886 GUCY2CP25092 1073 aa13.47□□□□□ -0.25
SMPD4-209ENST00000439886 NOM1Q5C9Z4 860 aaKnown RBP13.47□□□□□ -0.25
SMPD4-209ENST00000439886 CDK12Q9NYV4 1490 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-209ENST00000439886 BIRC2Q13490 618 aa13.47□□□□□ -0.25
SMPD4-209ENST00000439886 MTX1Q13505 466 aa13.47□□□□□ -0.25
SMPD4-209ENST00000439886 NBPF20Q3BBV1 942 aa13.47□□□□□ -0.25
SMPD4-209ENST00000439886 BEND3Q5T5X7 828 aa13.47□□□□□ -0.25
SMPD4-209ENST00000439886 JAKMIP3Q5VZ66 844 aa13.47□□□□□ -0.25
SMPD4-209ENST00000439886 NBPF11Q86T75 865 aa13.47□□□□□ -0.25
SMPD4-209ENST00000439886 PSMD1Q99460 953 aa13.47□□□□□ -0.25
SMPD4-209ENST00000439886 JRKLQ9Y4A0 524 aa13.47□□□□□ -0.25
SMPD4-209ENST00000439886 PTPRMP28827 1452 aa13.47□□□□□ -0.25
SMPD4-209ENST00000439886 LRRFIP1Q32MZ4 808 aaKnown RBP13.46□□□□□ -0.25
SMPD4-209ENST00000439886 DPF2Q92785 391 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 PARD6BQ9BYG5 372 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 SUFUQ9UMX1 484 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 CRB1P82279 1406 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 ATP7BP35670 1465 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 TMEM232C9JQI7 657 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 FAM69CQ0P6D2 419 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 PPP2R5AQ15172 486 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 KIF4BQ2VIQ3 1234 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 SPECC1Q5M775 1068 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 PDE11AQ9HCR9 933 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 ADAM21Q9UKJ8 722 aa13.46□□□□□ -0.25
SMPD4-209ENST00000439886 ARHGEF28Q8N1W1 1705 aaKnown RBP13.46□□□□□ -0.25
SMPD4-209ENST00000439886 TAF5LO75529 589 aa13.46□□□□□ -0.26
SMPD4-209ENST00000439886 ZNF202O95125 648 aa13.46□□□□□ -0.26
SMPD4-209ENST00000439886 CYP21A2P08686 494 aa13.46□□□□□ -0.26
SMPD4-209ENST00000439886 IBSPP21815 317 aaPredicted RBP13.46□□□□□ -0.26
SMPD4-209ENST00000439886 LRCH2Q5VUJ6 765 aa13.46□□□□□ -0.26
SMPD4-209ENST00000439886 SUCLG2Q96I99 432 aa13.46□□□□□ -0.26
SMPD4-209ENST00000439886 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.26
SMPD4-209ENST00000439886 RCOR1Q9UKL0 485 aa13.46□□□□□ -0.26
SMPD4-209ENST00000439886 RRP15Q9Y3B9 282 aaKnown RBP13.46□□□□□ -0.26
SMPD4-209ENST00000439886 SPTLC2O15270 562 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 SASH3O75995 380 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 PROSER3Q2NL68 480 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 KLHL10Q6JEL2 608 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 RBM43Q6ZSC3 357 aaKnown RBP13.45□□□□□ -0.26
SMPD4-209ENST00000439886 SGSM3Q96HU1 749 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 IRX2Q9BZI1 471 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-209ENST00000439886 HMG20BQ9P0W2 317 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 IMPACTQ9P2X3 320 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms