RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 LDHDQ86WU2 507 aa20.64■□□□□ 0.89
TOM1-207ENST00000439512 CNOT7Q9UIV1 285 aaKnown RBP20.64■□□□□ 0.89
TOM1-207ENST00000439512 RFX5P48382 616 aaPredicted RBP20.63■□□□□ 0.89
TOM1-207ENST00000439512 YTHDC1Q96MU7 727 aaKnown RBP20.63■□□□□ 0.89
TOM1-207ENST00000439512 COA1Q9GZY4 146 aa20.63■□□□□ 0.89
TOM1-207ENST00000439512 RCAN3Q9UKA8 241 aa20.63■□□□□ 0.89
TOM1-207ENST00000439512 VIL1P09327 827 aaKnown RBP20.62■□□□□ 0.89
TOM1-207ENST00000439512 RLBP1P12271 317 aa20.62■□□□□ 0.89
TOM1-207ENST00000439512 MROH5Q6ZUA9 1318 aa20.61■□□□□ 0.89
TOM1-207ENST00000439512 SHTN1A0MZ66 631 aa20.61■□□□□ 0.89
TOM1-207ENST00000439512 USP17L3A6NCW0 530 aa20.61■□□□□ 0.89
TOM1-207ENST00000439512 USP17L4A6NCW7 530 aa20.61■□□□□ 0.89
TOM1-207ENST00000439512 H7C1D1 291 aa20.61■□□□□ 0.89
TOM1-207ENST00000439512 PTPN12Q05209 780 aaKnown RBP20.61■□□□□ 0.89
TOM1-207ENST00000439512 METTL24Q5JXM2 366 aa20.61■□□□□ 0.89
TOM1-207ENST00000439512 USP17L1Q7RTZ2 530 aa20.61■□□□□ 0.89
TOM1-207ENST00000439512 DPF2Q92785 391 aa20.61■□□□□ 0.89
TOM1-207ENST00000439512 ADARB2Q9NS39 739 aaKnown RBP20.61■□□□□ 0.89
TOM1-207ENST00000439512 PASKQ96RG2 1323 aa20.6■□□□□ 0.89
TOM1-207ENST00000439512 GNAI2P04899 355 aa20.6■□□□□ 0.89
TOM1-207ENST00000439512 RPS12P25398 132 aaKnown RBP20.6■□□□□ 0.89
TOM1-207ENST00000439512 UBE4AQ14139 1066 aa20.6■□□□□ 0.89
TOM1-207ENST00000439512 C15orf52Q6ZUT6 534 aaKnown RBP20.6■□□□□ 0.89
TOM1-207ENST00000439512 USP50Q70EL3 339 aaPredicted RBP20.6■□□□□ 0.89
TOM1-207ENST00000439512 ITPRIPQ8IWB1 547 aa20.6■□□□□ 0.89
TOM1-207ENST00000439512 MICALL2Q8IY33 904 aa20.6■□□□□ 0.89
TOM1-207ENST00000439512 FBXW7Q969H0 707 aa20.6■□□□□ 0.89
TOM1-207ENST00000439512 EYA2O00167 538 aa20.59■□□□□ 0.89
TOM1-207ENST00000439512 APLP1P51693 650 aa20.59■□□□□ 0.89
TOM1-207ENST00000439512 PANK1Q8TE04 598 aa20.59■□□□□ 0.89
TOM1-207ENST00000439512 CD209Q9NNX6 404 aa20.59■□□□□ 0.89
TOM1-207ENST00000439512 ITGBL1O95965 494 aaPredicted RBP20.58■□□□□ 0.89
TOM1-207ENST00000439512 MAP1SQ66K74 1059 aaPredicted RBP20.58■□□□□ 0.89
TOM1-207ENST00000439512 RSBN1LQ6PCB5 846 aaPredicted RBP20.58■□□□□ 0.89
TOM1-207ENST00000439512 SIL1Q9H173 461 aa20.58■□□□□ 0.89
TOM1-207ENST00000439512 SRGAP3O43295 1099 aa20.57■□□□□ 0.88
TOM1-207ENST00000439512 PDE8BO95263 885 aa20.57■□□□□ 0.88
TOM1-207ENST00000439512 RBM26Q5T8P6 1007 aaKnown RBP20.57■□□□□ 0.88
TOM1-207ENST00000439512 TTLL5Q6EMB2 1281 aa20.57■□□□□ 0.88
TOM1-207ENST00000439512 SAMD7Q7Z3H4 446 aa20.57■□□□□ 0.88
TOM1-207ENST00000439512 ZNF804AQ7Z570 1209 aa20.57■□□□□ 0.88
TOM1-207ENST00000439512 AGBL3Q8NEM8 1001 aa20.57■□□□□ 0.88
TOM1-207ENST00000439512 TRPM4Q8TD43 1214 aa20.57■□□□□ 0.88
TOM1-207ENST00000439512 GMLQ99445 158 aa20.57■□□□□ 0.88
TOM1-207ENST00000439512 PA2G4Q9UQ80 394 aaKnown RBP20.57■□□□□ 0.88
TOM1-207ENST00000439512 ZBTB7BO15156 539 aaPredicted RBP20.56■□□□□ 0.88
TOM1-207ENST00000439512 MS4A1P11836 297 aa20.56■□□□□ 0.88
TOM1-207ENST00000439512 HIRAP54198 1017 aaPredicted RBP20.56■□□□□ 0.88
TOM1-207ENST00000439512 GTF2IP78347 998 aa20.56■□□□□ 0.88
TOM1-207ENST00000439512 DACT2Q5SW24 774 aa20.56■□□□□ 0.88
TOM1-207ENST00000439512 STRIP1Q5VSL9 837 aa20.56■□□□□ 0.88
TOM1-207ENST00000439512 ATG9AQ7Z3C6 839 aa20.56■□□□□ 0.88
TOM1-207ENST00000439512 CNTROBQ8N137 903 aa20.56■□□□□ 0.88
TOM1-207ENST00000439512 VGLL2Q8N8G2 317 aa20.56■□□□□ 0.88
TOM1-207ENST00000439512 MXD3Q9BW11 206 aa20.56■□□□□ 0.88
TOM1-207ENST00000439512 EGFRP00533 1210 aa20.55■□□□□ 0.88
TOM1-207ENST00000439512 GYG1P46976 350 aa20.55■□□□□ 0.88
TOM1-207ENST00000439512 HTRA3P83110 453 aa20.55■□□□□ 0.88
TOM1-207ENST00000439512 MTX1Q13505 466 aa20.55■□□□□ 0.88
TOM1-207ENST00000439512 TBC1D10BQ4KMP7 808 aaPredicted RBP20.55■□□□□ 0.88
TOM1-207ENST00000439512 COPRSQ9NQ92 184 aa20.55■□□□□ 0.88
TOM1-207ENST00000439512 FBXO3Q9UK99 471 aa20.55■□□□□ 0.88
TOM1-207ENST00000439512 CIAO1O76071 339 aa20.54■□□□□ 0.88
TOM1-207ENST00000439512 IL1R1P14778 569 aa20.54■□□□□ 0.88
TOM1-207ENST00000439512 HIBADHP31937 336 aaKnown RBP20.54■□□□□ 0.88
TOM1-207ENST00000439512 DNAJC5GQ8N7S2 189 aa20.54■□□□□ 0.88
TOM1-207ENST00000439512 FAM84BQ96KN1 310 aaPredicted RBP20.54■□□□□ 0.88
TOM1-207ENST00000439512 CEP126Q9P2H0 1117 aa20.54■□□□□ 0.88
TOM1-207ENST00000439512 PGAP2Q9UHJ9 254 aa20.54■□□□□ 0.88
TOM1-207ENST00000439512 ARAP2Q8WZ64 1704 aa20.53■□□□□ 0.88
TOM1-207ENST00000439512 USP17L8P0C7I0 530 aa20.53■□□□□ 0.88
TOM1-207ENST00000439512 C1orf115Q9H7X2 142 aa20.53■□□□□ 0.88
TOM1-207ENST00000439512 PNMA6EA0A0J9YXQ4 647 aa20.52■□□□□ 0.88
TOM1-207ENST00000439512 IL15P40933 162 aaPredicted RBP20.52■□□□□ 0.88
TOM1-207ENST00000439512 PUM3Q15397 648 aaKnown RBP20.52■□□□□ 0.88
TOM1-207ENST00000439512 SASH1O94885 1247 aa20.51■□□□□ 0.87
TOM1-207ENST00000439512 IFIT1P09914 478 aaKnown RBP20.51■□□□□ 0.87
TOM1-207ENST00000439512 ZNF280AP59817 542 aaPredicted RBP20.51■□□□□ 0.87
TOM1-207ENST00000439512 CAVIN4Q5BKX8 364 aa20.51■□□□□ 0.87
TOM1-207ENST00000439512 FBXO33Q7Z6M2 555 aa20.51■□□□□ 0.87
TOM1-207ENST00000439512 VPS37DQ86XT2 251 aa20.51■□□□□ 0.87
TOM1-207ENST00000439512 TDRD7Q8NHU6 1098 aaKnown RBP20.51■□□□□ 0.87
TOM1-207ENST00000439512 ZC3H15Q8WU90 426 aaKnown RBP20.51■□□□□ 0.87
TOM1-207ENST00000439512 JAG2Q9Y219 1238 aa20.51■□□□□ 0.87
TOM1-207ENST00000439512 TRPM7Q96QT4 1865 aa20.51■□□□□ 0.87
TOM1-207ENST00000439512 FGFR2P21802 821 aa20.5■□□□□ 0.87
TOM1-207ENST00000439512 ATP8B2P98198 1209 aa20.5■□□□□ 0.87
TOM1-207ENST00000439512 OGFOD1Q8N543 542 aa20.5■□□□□ 0.87
TOM1-207ENST00000439512 COG6Q9Y2V7 657 aa20.5■□□□□ 0.87
TOM1-207ENST00000439512 MYO3BQ8WXR4 1341 aa20.5■□□□□ 0.87
TOM1-207ENST00000439512 SLC5A1P13866 664 aa20.49■□□□□ 0.87
TOM1-207ENST00000439512 BCAMP50895 628 aa20.49■□□□□ 0.87
TOM1-207ENST00000439512 KIF4BQ2VIQ3 1234 aa20.49■□□□□ 0.87
TOM1-207ENST00000439512 KIAA0825Q8IV33 1275 aa20.49■□□□□ 0.87
TOM1-207ENST00000439512 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.49■□□□□ 0.87
TOM1-207ENST00000439512 LPIN2Q92539 896 aa20.49■□□□□ 0.87
TOM1-207ENST00000439512 IQSEC3Q9UPP2 1182 aaPredicted RBP20.49■□□□□ 0.87
TOM1-207ENST00000439512 FRAT2O75474 233 aaPredicted RBP20.48■□□□□ 0.87
TOM1-207ENST00000439512 FMR1Q06787 632 aaKnown RBP eCLIP20.48■□□□□ 0.87
TOM1-207ENST00000439512 MVPQ14764 893 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms