RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 PA2G4Q9UQ80 394 aaKnown RBP7.29□□□□□ -1.24
BDNF-211ENST00000439476 ASXL2Q76L83 1435 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 MYOM2P54296 1465 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 PPP1R12AO14974 1030 aaPredicted RBP7.28□□□□□ -1.24
BDNF-211ENST00000439476 TUBBP07437 444 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 NEFHP12036 1026 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 PAX3P23760 479 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 GABPB1Q06547 395 aaPredicted RBP7.28□□□□□ -1.24
BDNF-211ENST00000439476 CBX8Q9HC52 389 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 GOPCQ9HD26 462 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 AOX1Q06278 1338 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 UHRF1BP1LA0JNW5 1464 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 CROCC2H7BZ55 1655 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 GUCY2CP25092 1073 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 GBP2P32456 591 aaPredicted RBP7.28□□□□□ -1.24
BDNF-211ENST00000439476 PAFAH1B1P43034 410 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 CUL4AQ13619 759 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 SKIDA1Q1XH10 827 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 ISM2Q6H9L7 571 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 DDX12PQ92771 950 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 PDLIM2Q96JY6 352 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 TSG101Q99816 390 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 LRRC27Q9C0I9 530 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 HYPKQ9NX55 129 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 UGGT1Q9NYU2 1555 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 POLR3DP05423 398 aaPredicted RBP7.28□□□□□ -1.24
BDNF-211ENST00000439476 TRIM21P19474 475 aaKnown RBP7.28□□□□□ -1.24
BDNF-211ENST00000439476 CASQ1P31415 396 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 MTA1Q13330 715 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 E2F4Q16254 413 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 MYD88Q99836 296 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 CPSF2Q9P2I0 782 aaKnown RBP7.28□□□□□ -1.24
BDNF-211ENST00000439476 DNAI1Q9UI46 699 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 ADCY10Q96PN6 1610 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 STARD3NLO95772 234 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 ZNF75DP51815 510 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 GYS2P54840 703 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 Q6ZUG5 572 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.28□□□□□ -1.24
BDNF-211ENST00000439476 JARID2Q92833 1246 aaPredicted RBP7.28□□□□□ -1.24
BDNF-211ENST00000439476 TANGO6Q9C0B7 1094 aa7.28□□□□□ -1.24
BDNF-211ENST00000439476 IQGAP3Q86VI3 1631 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 GOLGA6L10A0A0M3HER8 536 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 IGHMBP2P38935 993 aaKnown RBP7.27□□□□□ -1.25
BDNF-211ENST00000439476 FOXD4Q12950 439 aaPredicted RBP7.27□□□□□ -1.25
BDNF-211ENST00000439476 PROSER2Q86WR7 435 aaPredicted RBP7.27□□□□□ -1.25
BDNF-211ENST00000439476 FAM114A1Q8IWE2 563 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 AIDAQ96BJ3 306 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 SRRTQ9BXP5 876 aaKnown RBP7.27□□□□□ -1.25
BDNF-211ENST00000439476 OSBPL3Q9H4L5 887 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 BSDC1Q9NW68 430 aaPredicted RBP7.27□□□□□ -1.25
BDNF-211ENST00000439476 PREX2Q70Z35 1606 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 KIAA0232Q92628 1395 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 APBB1IPQ7Z5R6 666 aaPredicted RBP7.27□□□□□ -1.25
BDNF-211ENST00000439476 MRPS27Q92552 414 aaKnown RBP7.27□□□□□ -1.25
BDNF-211ENST00000439476 CCDC102AQ96A19 550 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 ZNF652Q9Y2D9 606 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 SSH2Q76I76 1423 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 ZCCHC11Q5TAX3 1644 aaKnown RBP7.27□□□□□ -1.25
BDNF-211ENST00000439476 YEATS4O95619 227 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 IFIT1P09914 478 aaKnown RBP7.27□□□□□ -1.25
BDNF-211ENST00000439476 ATP6V1AP38606 617 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 TTF1Q15361 905 aaPredicted RBP7.27□□□□□ -1.25
BDNF-211ENST00000439476 ANKLE2Q86XL3 938 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 CCDC12Q8WUD4 166 aaPredicted RBP7.27□□□□□ -1.25
BDNF-211ENST00000439476 ANAPC4Q9UJX5 808 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 MYO5CQ9NQX4 1742 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 RGS12O14924 1447 aa7.27□□□□□ -1.25
BDNF-211ENST00000439476 EYA1Q99502 592 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 TAOK3Q9H2K8 898 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 CLSTN2Q9H4D0 955 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 PYCARDQ9ULZ3 195 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 EDC4Q6P2E9 1401 aaKnown RBP7.26□□□□□ -1.25
BDNF-211ENST00000439476 ALDH1L1O75891 902 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 PAX7P23759 505 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 GNG11P61952 73 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 AMPD3Q01432 767 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 SPAG1Q07617 926 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 ERO1AQ96HE7 468 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 TEX13AQ9BXU3 409 aaPredicted RBP7.26□□□□□ -1.25
BDNF-211ENST00000439476 RMI1Q9H9A7 625 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 ORC3Q9UBD5 711 aaPredicted RBP7.26□□□□□ -1.25
BDNF-211ENST00000439476 GOLGA8BA8MQT2 603 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 GCOM1H8Y6P7 765 aaPredicted RBP7.26□□□□□ -1.25
BDNF-211ENST00000439476 TULP2O00295 520 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 MYZAPP0CAP1 466 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 MAP3K12Q12852 859 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 TNIP1Q15025 636 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 TTC19Q6DKK2 380 aaPredicted RBP7.26□□□□□ -1.25
BDNF-211ENST00000439476 DDX46Q7L014 1031 aaKnown RBP7.26□□□□□ -1.25
BDNF-211ENST00000439476 CDC37L1Q7L3B6 337 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 IQCA1Q86XH1 822 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 SLF2Q8IX21 1173 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 CTCFLQ8NI51 663 aaPredicted RBP7.26□□□□□ -1.25
BDNF-211ENST00000439476 LEO1Q8WVC0 666 aaPredicted RBP7.26□□□□□ -1.25
BDNF-211ENST00000439476 MTMR6Q9Y217 621 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 JRKLQ9Y4A0 524 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 USP16Q9Y5T5 823 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 MAP2K2P36507 400 aa7.26□□□□□ -1.25
BDNF-211ENST00000439476 UBASH3AP57075 661 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms