RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CCDC73Q6ZRK6 1079 aa11.6□□□□□ -0.55
CDC42SE1-202ENST00000439374 CNNM1Q9NRU3 951 aa11.6□□□□□ -0.55
CDC42SE1-202ENST00000439374 TMEM51Q9NW97 253 aa11.6□□□□□ -0.55
CDC42SE1-202ENST00000439374 BABAM1Q9NWV8 329 aa11.6□□□□□ -0.55
CDC42SE1-202ENST00000439374 IQSEC3Q9UPP2 1182 aaPredicted RBP11.6□□□□□ -0.55
CDC42SE1-202ENST00000439374 A0A1B0GVL5 298 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 SMTNL1A8MU46 457 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 KINO60870 393 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 HOXB7P09629 217 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 HINFPQ9BQA5 517 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 SRRTQ9BXP5 876 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 SH2B1Q9NRF2 756 aaPredicted RBP11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 PEAK1Q9H792 1746 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 NRXN3Q9Y4C0 1643 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 SSH2Q76I76 1423 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 ZCRB1Q8TBF4 217 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 GJB4Q9NTQ9 266 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 CWC25Q9NXE8 425 aaPredicted RBP11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 TBC1D2BQ9UPU7 963 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 PDCP20941 246 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 PTPN12Q05209 780 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 PDIA6Q15084 440 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 CCAR1Q8IX12 1150 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 KIF18AQ8NI77 898 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 TTC14Q96N46 770 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 ITSN1Q15811 1721 aa11.59□□□□□ -0.55
CDC42SE1-202ENST00000439374 NECTIN1Q15223 517 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 PLEKHA4Q9H4M7 779 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 ANKRD26Q9UPS8 1709 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 SNAP23O00161 211 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 RPS6KB1P23443 525 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 FSIP1Q8NA03 581 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 DCAF5Q96JK2 942 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 TIGD1Q96MW7 591 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 PXDNQ92626 1479 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 SNW1Q13573 536 aaKnown RBP11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 MCMDC2Q4G0Z9 681 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 METTL24Q5JXM2 366 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 PAXIP1Q6ZW49 1069 aaPredicted RBP11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 LEO1Q8WVC0 666 aaPredicted RBP11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 MAP4K1Q92918 833 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 SPTLC3Q9NUV7 552 aa11.58□□□□□ -0.56
CDC42SE1-202ENST00000439374 A0A1B0GUL7 405 aa11.57□□□□□ -0.56
CDC42SE1-202ENST00000439374 CCDC66A2RUB6 948 aa11.57□□□□□ -0.56
CDC42SE1-202ENST00000439374 TAF5LO75529 589 aa11.57□□□□□ -0.56
CDC42SE1-202ENST00000439374 RALYLQ86SE5 291 aaKnown RBP11.57□□□□□ -0.56
CDC42SE1-202ENST00000439374 PAG1Q9NWQ8 432 aa11.57□□□□□ -0.56
CDC42SE1-202ENST00000439374 IFNKQ9P0W0 207 aa11.57□□□□□ -0.56
CDC42SE1-202ENST00000439374 AOX1Q06278 1338 aa11.57□□□□□ -0.56
CDC42SE1-202ENST00000439374 CYP21A2P08686 494 aa11.57□□□□□ -0.56
CDC42SE1-202ENST00000439374 ADORA1P30542 326 aa11.57□□□□□ -0.56
CDC42SE1-202ENST00000439374 CCDC158Q5M9N0 1113 aa11.57□□□□□ -0.56
CDC42SE1-202ENST00000439374 ANKRD1Q15327 319 aa11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 UBXN4Q92575 508 aa11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 TMOD3Q9NYL9 352 aa11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 CEMIPQ8WUJ3 1361 aa11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 LMAN1P49257 510 aa11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 DNAJC10Q8IXB1 793 aa11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 CPLX3Q8WVH0 158 aa11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 RGPD8O14715 1765 aaPredicted RBP11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 MARCKSP29966 332 aaPredicted RBP11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 TERF2Q15554 542 aa11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 LDHAL6AQ6ZMR3 332 aa11.56□□□□□ -0.56
CDC42SE1-202ENST00000439374 TMEM94Q12767 1356 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 ADAMTS2O95450 1211 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 SLFN14P0C7P3 912 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 PGBD1Q96JS3 809 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 MTMR7Q9Y216 660 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 NBPF26B4DH59 902 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 HNRNPH2P55795 449 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 MCM6Q14566 821 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 KARSQ15046 597 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 SLC4A8Q2Y0W8 1093 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 NBPF14Q5TI25 921 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 NBPF10Q6P3W6 841 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 NBPF15Q8N660 670 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 ZNF397Q8NF99 534 aaPredicted RBP11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 ACSBG1Q96GR2 724 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 DDX41Q9UJV9 622 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 ASAP1Q9ULH1 1129 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 SERPINC1P01008 464 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 KIF6Q6ZMV9 814 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 LRRC8AQ8IWT6 810 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 ANKRD7Q92527 254 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 CARD6Q9BX69 1037 aa11.55□□□□□ -0.56
CDC42SE1-202ENST00000439374 NUTM2BA6NNL0 878 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 NUTM2EB1AL46 878 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 IFIT5Q13325 482 aaKnown RBP11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 FKBP15Q5T1M5 1219 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 BICDL1Q6ZP65 573 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 GPIHBP1Q8IV16 184 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 NUTM2AQ8IVF1 878 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 TRMT112Q9UI30 125 aaKnown RBP11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 U3KPZ7 1027 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 SLU7O95391 586 aaKnown RBP11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 SFPQP23246 707 aaKnown RBP eCLIP11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 ST3GAL1Q11201 340 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 CFAP100Q494V2 611 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms