RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 NAT10Q9H0A0 1025 aaKnown RBP15.54■□□□□ 0.08
ACTN1-204ENST00000438964 A0A0U1RQJ8 604 aa15.54■□□□□ 0.08
ACTN1-204ENST00000438964 EPHA10Q5JZY3 1008 aa15.54■□□□□ 0.08
ACTN1-204ENST00000438964 TTLL5Q6EMB2 1281 aa15.54■□□□□ 0.08
ACTN1-204ENST00000438964 TRIM65Q6PJ69 517 aa15.54■□□□□ 0.08
ACTN1-204ENST00000438964 FMR1NBQ8N0W7 255 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-204ENST00000438964 ATRIPQ8WXE1 791 aa15.54■□□□□ 0.08
ACTN1-204ENST00000438964 H3BQF6 201 aa15.53■□□□□ 0.08
ACTN1-204ENST00000438964 HSP90AB3PQ58FF7 597 aa15.53■□□□□ 0.08
ACTN1-204ENST00000438964 OSBPL5Q9H0X9 879 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-204ENST00000438964 ZSCAN16Q9H4T2 348 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-204ENST00000438964 KIAA1468Q9P260 1216 aa15.53■□□□□ 0.08
ACTN1-204ENST00000438964 FLT4P35916 1363 aa15.53■□□□□ 0.08
ACTN1-204ENST00000438964 BTBD11A6QL63 1104 aa15.53■□□□□ 0.08
ACTN1-204ENST00000438964 TADA3O75528 432 aa15.53■□□□□ 0.08
ACTN1-204ENST00000438964 ADKP55263 362 aaKnown RBP15.53■□□□□ 0.08
ACTN1-204ENST00000438964 RBM33Q96EV2 1170 aaKnown RBP15.53■□□□□ 0.08
ACTN1-204ENST00000438964 TOMM22Q9NS69 142 aa15.53■□□□□ 0.08
ACTN1-204ENST00000438964 PUF60Q9UHX1 559 aaKnown RBP15.53■□□□□ 0.08
ACTN1-204ENST00000438964 N4BP1O75113 896 aaKnown RBP15.52■□□□□ 0.08
ACTN1-204ENST00000438964 SLC3A2P08195 630 aaKnown RBP15.52■□□□□ 0.08
ACTN1-204ENST00000438964 PAXIP1Q6ZW49 1069 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-204ENST00000438964 LRRC59Q96AG4 307 aaKnown RBP15.52■□□□□ 0.08
ACTN1-204ENST00000438964 PARP3Q9Y6F1 533 aa15.52■□□□□ 0.08
ACTN1-204ENST00000438964 OVOS2A0A0J9YW53 1432 aa15.52■□□□□ 0.08
ACTN1-204ENST00000438964 OVOS2Q6IE36 1432 aa15.52■□□□□ 0.08
ACTN1-204ENST00000438964 FAM208AQ9UK61 1670 aaKnown RBP15.52■□□□□ 0.08
ACTN1-204ENST00000438964 USP42Q9H9J4 1324 aaKnown RBP15.52■□□□□ 0.08
ACTN1-204ENST00000438964 MYO1CO00159 1063 aa15.52■□□□□ 0.07
ACTN1-204ENST00000438964 CTAGE5O15320 804 aa15.52■□□□□ 0.07
ACTN1-204ENST00000438964 UBASH3AP57075 661 aa15.52■□□□□ 0.07
ACTN1-204ENST00000438964 SPECC1Q5M775 1068 aa15.52■□□□□ 0.07
ACTN1-204ENST00000438964 TPM4P67936 248 aa15.52■□□□□ 0.07
ACTN1-204ENST00000438964 CC2D1AQ6P1N0 951 aaPredicted RBP15.52■□□□□ 0.07
ACTN1-204ENST00000438964 DBNLQ9UJU6 430 aaKnown RBP15.52■□□□□ 0.07
ACTN1-204ENST00000438964 HOXC9P31274 260 aa15.51■□□□□ 0.07
ACTN1-204ENST00000438964 DBNDD2Q9BQY9 259 aa15.51■□□□□ 0.07
ACTN1-204ENST00000438964 PARD6BQ9BYG5 372 aa15.51■□□□□ 0.07
ACTN1-204ENST00000438964 CAVIN2O95810 425 aa15.51■□□□□ 0.07
ACTN1-204ENST00000438964 RXRAP19793 462 aa15.51■□□□□ 0.07
ACTN1-204ENST00000438964 TFCP2Q12800 502 aa15.51■□□□□ 0.07
ACTN1-204ENST00000438964 PNOCQ13519 176 aa15.51■□□□□ 0.07
ACTN1-204ENST00000438964 NCAPHQ15003 741 aa15.51■□□□□ 0.07
ACTN1-204ENST00000438964 TOGARAM2Q6ZUX3 1019 aa15.51■□□□□ 0.07
ACTN1-204ENST00000438964 AIFM3Q96NN9 605 aa15.51■□□□□ 0.07
ACTN1-204ENST00000438964 VPS18Q9P253 973 aa15.51■□□□□ 0.07
ACTN1-204ENST00000438964 MED23Q9ULK4 1368 aa15.5■□□□□ 0.07
ACTN1-204ENST00000438964 PDIA4P13667 645 aaKnown RBP15.5■□□□□ 0.07
ACTN1-204ENST00000438964 MTF1Q14872 753 aa15.5■□□□□ 0.07
ACTN1-204ENST00000438964 ERC1Q8IUD2 1116 aa15.5■□□□□ 0.07
ACTN1-204ENST00000438964 CCDC150Q8NCX0 1101 aa15.5■□□□□ 0.07
ACTN1-204ENST00000438964 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-204ENST00000438964 DIP2CQ9Y2E4 1556 aa15.5■□□□□ 0.07
ACTN1-204ENST00000438964 KIF2AO00139 706 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-204ENST00000438964 ZNF202O95125 648 aa15.5■□□□□ 0.07
ACTN1-204ENST00000438964 MTX1Q13505 466 aa15.5■□□□□ 0.07
ACTN1-204ENST00000438964 REXO1L1PQ8IX06 675 aa15.5■□□□□ 0.07
ACTN1-204ENST00000438964 C3P01024 1663 aa15.5■□□□□ 0.07
ACTN1-204ENST00000438964 USP6P35125 1406 aa15.5■□□□□ 0.07
ACTN1-204ENST00000438964 DHX58Q96C10 678 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 ZNF396Q96N95 335 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-204ENST00000438964 NEUROD6Q96NK8 337 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 RASSF4Q9H2L5 321 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 LZTFL1Q9NQ48 299 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 ADAM21Q9UKJ8 722 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 VWA3AA6NCI4 1184 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 GRM8O00222 908 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 CYB5RLQ6IPT4 315 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 FANCLQ9NW38 375 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 ZNF609O15014 1411 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 PSDA5PKW4 1024 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-204ENST00000438964 GOLIM4O00461 696 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 NRDCO43847 1150 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 FDPSP14324 419 aaKnown RBP15.49■□□□□ 0.07
ACTN1-204ENST00000438964 PPP2R3AQ06190 1150 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 ZNF827Q17R98 1081 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 CPLX3Q8WVH0 158 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 CLIC6Q96NY7 704 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 PDE11AQ9HCR9 933 aa15.49■□□□□ 0.07
ACTN1-204ENST00000438964 A2ML1A8K2U0 1454 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 HIP1O00291 1037 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 FOXN1O15353 648 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 GIGYF1O75420 1035 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-204ENST00000438964 TRMT44Q8IYL2 757 aaKnown RBP15.48■□□□□ 0.07
ACTN1-204ENST00000438964 ABTB2Q8N961 1025 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 HSD3B7Q9H2F3 369 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 MROH7-TTC4A0A0A0MT08 1334 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 NRKQ7Z2Y5 1582 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 SBNO1A3KN83 1393 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 RIMBP3CA6NJZ7 1639 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 RIMBP3BA6NNM3 1639 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 KIF28PB7ZC32 967 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 KDRP35968 1356 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 SLC39A6Q13433 755 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 TXLNBQ8N3L3 684 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 SMARCC2Q8TAQ2 1214 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 RIMBP3Q9UFD9 1639 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 PPP2R2CQ9Y2T4 447 aa15.48■□□□□ 0.07
ACTN1-204ENST00000438964 NEDD4P46934 1319 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 TOP1P11387 765 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms