RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 FAM107BQ9H098 131 aa7.08□□□□□ -1.28
BDNF-210ENST00000438929 SLC52A1Q9NWF4 448 aa7.08□□□□□ -1.28
BDNF-210ENST00000438929 HMG20BQ9P0W2 317 aa7.08□□□□□ -1.28
BDNF-210ENST00000438929 NDUFB9Q9Y6M9 179 aa7.08□□□□□ -1.28
BDNF-210ENST00000438929 HECW2Q9P2P5 1572 aa7.08□□□□□ -1.28
BDNF-210ENST00000438929 RPAP1Q9BWH6 1393 aaPredicted RBP7.08□□□□□ -1.28
BDNF-210ENST00000438929 SBNO2Q9Y2G9 1366 aa7.08□□□□□ -1.28
BDNF-210ENST00000438929 CFAP65Q6ZU64 1925 aaKnown RBP7.07□□□□□ -1.28
BDNF-210ENST00000438929 FKBP4Q02790 459 aaKnown RBP eCLIP7.07□□□□□ -1.28
BDNF-210ENST00000438929 RNF187Q5TA31 235 aaPredicted RBP7.07□□□□□ -1.28
BDNF-210ENST00000438929 CCDC82Q8N4S0 544 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 PPM1EQ8WY54 764 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 PUS7Q96PZ0 661 aaKnown RBP7.07□□□□□ -1.28
BDNF-210ENST00000438929 USP44Q9H0E7 712 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 ADAM21Q9UKJ8 722 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 JRKLQ9Y4A0 524 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 KDM4FA0A1W2PPD8 638 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 RAPGEF3O95398 923 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 CCDC175P0C221 793 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 ZNF853P0CG23 659 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 DPCR1Q3MIW9 517 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 CT47A1Q5JQC4 288 aaPredicted RBP7.07□□□□□ -1.28
BDNF-210ENST00000438929 GPR161Q8N6U8 529 aaKnown RBP7.07□□□□□ -1.28
BDNF-210ENST00000438929 U3KPZ7 1027 aaPredicted RBP7.07□□□□□ -1.28
BDNF-210ENST00000438929 GOLGA8BA8MQT2 603 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 POTEB2H3BUK9 544 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 EBAG9O00559 213 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 ACTN2P35609 894 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 ADKP55263 362 aaKnown RBP7.07□□□□□ -1.28
BDNF-210ENST00000438929 GRM1Q13255 1194 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 SART3Q15020 963 aaKnown RBP7.07□□□□□ -1.28
BDNF-210ENST00000438929 CCDC129Q6ZRS4 1044 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 CCDC148Q8NFR7 591 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 EDC3Q96F86 508 aaKnown RBP7.07□□□□□ -1.28
BDNF-210ENST00000438929 PGBD1Q96JS3 809 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 CHPF2Q9P2E5 772 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 STAP2Q9UGK3 403 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 DACH1Q9UI36 760 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 KIF24Q5T7B8 1368 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 TTC41PQ6P2S7 1318 aa7.07□□□□□ -1.28
BDNF-210ENST00000438929 CHRM1P11229 460 aaPredicted RBP7.06□□□□□ -1.28
BDNF-210ENST00000438929 MYL5Q02045 173 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 MTX1Q13505 466 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 MAP9Q49MG5 647 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 CCDC158Q5M9N0 1113 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 KCNG4Q8TDN1 519 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 MPHOSPH8Q99549 860 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 TM6SF1Q9BZW5 370 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 MATR3P43243 847 aaKnown RBP eCLIP7.06□□□□□ -1.28
BDNF-210ENST00000438929 LONRF2Q1L5Z9 754 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 SLFNL1Q499Z3 407 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 CCDC102BQ68D86 513 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 MYCBPQ99417 103 aaPredicted RBP7.06□□□□□ -1.28
BDNF-210ENST00000438929 EFCC1Q9HA90 598 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.06□□□□□ -1.28
BDNF-210ENST00000438929 MAP3K2Q9Y2U5 619 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 UGGT1Q9NYU2 1555 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 PIK3R4Q99570 1358 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 PSDA5PKW4 1024 aaPredicted RBP7.06□□□□□ -1.28
BDNF-210ENST00000438929 UBAP1LF5GYI3 381 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 WASLO00401 505 aaPredicted RBP7.06□□□□□ -1.28
BDNF-210ENST00000438929 ARHGAP6O43182 974 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 CDC25BP30305 580 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 ICE2Q659A1 982 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 CCDC91Q7Z6B0 441 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 CEP112Q8N8E3 955 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 TTC14Q96N46 770 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 NUP88Q99567 741 aaPredicted RBP7.06□□□□□ -1.28
BDNF-210ENST00000438929 FUCA2Q9BTY2 467 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 PARD6BQ9BYG5 372 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 KIAA1468Q9P260 1216 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 CTAGE9A4FU28 777 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 BTBD11A6QL63 1104 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 GOLIM4O00461 696 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 ZNF202O95125 648 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 LIG3P49916 1009 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 CWF19L2Q2TBE0 894 aaKnown RBP7.06□□□□□ -1.28
BDNF-210ENST00000438929 KIAA1328Q86T90 577 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 FAN1Q9Y2M0 1017 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 ATP7AQ04656 1500 aa7.06□□□□□ -1.28
BDNF-210ENST00000438929 MROH1Q8NDA8 1641 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 LOC102724159A0A0B4J2E5 919 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 STX17P56962 302 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 PWP2Q15269 919 aaKnown RBP7.05□□□□□ -1.28
BDNF-210ENST00000438929 RRP12Q5JTH9 1297 aaKnown RBP7.05□□□□□ -1.28
BDNF-210ENST00000438929 KLHDC4Q8TBB5 520 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 CAPZA3Q96KX2 299 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 PPP2R2CQ9Y2T4 447 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 VIRMAQ69YN4 1812 aaKnown RBP7.05□□□□□ -1.28
BDNF-210ENST00000438929 A0A0D9SFI3 127 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 ATP1A3P13637 1013 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 DNA2P51530 1060 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 PPARDQ03181 441 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 FKBP15Q5T1M5 1219 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 CCDC181Q5TID7 509 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 FBXO31Q5XUX0 539 aaPredicted RBP7.05□□□□□ -1.28
BDNF-210ENST00000438929 SSH3Q8TE77 659 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 REREQ9P2R6 1566 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 AOX1Q06278 1338 aa7.05□□□□□ -1.28
BDNF-210ENST00000438929 ZFYVE9O95405 1425 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms