RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 HSP90AB3PQ58FF7 597 aa14.75□□□□□ -0.05
CSTF3-203ENST00000438862 LRRC37AA6NMS7 1700 aa14.75□□□□□ -0.05
CSTF3-203ENST00000438862 DDX60Q8IY21 1712 aaKnown RBP14.75□□□□□ -0.05
CSTF3-203ENST00000438862 ASTN2O75129 1339 aaPredicted RBP14.74□□□□□ -0.05
CSTF3-203ENST00000438862 UBE2Q2LH0YL09 131 aa14.74□□□□□ -0.05
CSTF3-203ENST00000438862 DLL1O00548 723 aa14.74□□□□□ -0.05
CSTF3-203ENST00000438862 ZNF280AP59817 542 aaPredicted RBP14.74□□□□□ -0.05
CSTF3-203ENST00000438862 GOLGA2Q08379 1002 aa14.74□□□□□ -0.05
CSTF3-203ENST00000438862 DOK7Q18PE1 504 aa14.74□□□□□ -0.05
CSTF3-203ENST00000438862 AGBL3Q8NEM8 1001 aa14.74□□□□□ -0.05
CSTF3-203ENST00000438862 TMEM121BQ9BXQ6 578 aaPredicted RBP14.74□□□□□ -0.05
CSTF3-203ENST00000438862 ZC3H12CQ9C0D7 883 aaKnown RBP14.74□□□□□ -0.05
CSTF3-203ENST00000438862 POLLQ9UGP5 575 aa14.74□□□□□ -0.05
CSTF3-203ENST00000438862 TRMT112Q9UI30 125 aaKnown RBP14.74□□□□□ -0.05
CSTF3-203ENST00000438862 RBBP6Q7Z6E9 1792 aaKnown RBP14.74□□□□□ -0.05
CSTF3-203ENST00000438862 TAF1P21675 1872 aa14.74□□□□□ -0.05
CSTF3-203ENST00000438862 SH3TC1Q8TE82 1336 aa14.73□□□□□ -0.05
CSTF3-203ENST00000438862 MOB2Q70IA6 237 aa14.73□□□□□ -0.05
CSTF3-203ENST00000438862 NLRP10Q86W26 655 aa14.73□□□□□ -0.05
CSTF3-203ENST00000438862 TRIM17Q9Y577 477 aa14.73□□□□□ -0.05
CSTF3-203ENST00000438862 U2AF1L5P0DN76 240 aaPredicted RBP14.72□□□□□ -0.05
CSTF3-203ENST00000438862 INHBEP58166 350 aa14.72□□□□□ -0.05
CSTF3-203ENST00000438862 U2AF1Q01081 240 aaKnown RBP eCLIP14.72□□□□□ -0.058e-37■■■■□ 22.1
CSTF3-203ENST00000438862 TCIRG1Q13488 830 aa14.72□□□□□ -0.05
CSTF3-203ENST00000438862 TTLL12Q14166 644 aaPredicted RBP14.72□□□□□ -0.05
CSTF3-203ENST00000438862 OTOP1Q7RTM1 612 aa14.72□□□□□ -0.05
CSTF3-203ENST00000438862 ZNF609O15014 1411 aa14.72□□□□□ -0.05
CSTF3-203ENST00000438862 KDM3BQ7LBC6 1761 aa14.72□□□□□ -0.05
CSTF3-203ENST00000438862 G3V3G9 751 aa14.71□□□□□ -0.05
CSTF3-203ENST00000438862 SNPHO15079 494 aa14.71□□□□□ -0.05
CSTF3-203ENST00000438862 NF2P35240 595 aa14.71□□□□□ -0.05
CSTF3-203ENST00000438862 GPSM2P81274 684 aa14.71□□□□□ -0.05
CSTF3-203ENST00000438862 RSBN1LQ6PCB5 846 aaPredicted RBP14.71□□□□□ -0.05
CSTF3-203ENST00000438862 SPOCK2Q92563 424 aa14.71□□□□□ -0.05
CSTF3-203ENST00000438862 R3HDMLQ9H3Y0 253 aa14.71□□□□□ -0.05
CSTF3-203ENST00000438862 MYOZ2Q9NPC6 264 aa14.71□□□□□ -0.05
CSTF3-203ENST00000438862 USP17L8P0C7I0 530 aa14.7□□□□□ -0.06
CSTF3-203ENST00000438862 EN2P19622 333 aaPredicted RBP14.7□□□□□ -0.06
CSTF3-203ENST00000438862 LRP10Q7Z4F1 713 aa14.7□□□□□ -0.06
CSTF3-203ENST00000438862 TBC1D16Q8TBP0 767 aa14.7□□□□□ -0.06
CSTF3-203ENST00000438862 MARVELD3Q96A59 401 aa14.7□□□□□ -0.06
CSTF3-203ENST00000438862 PTPN22Q9Y2R2 807 aa14.7□□□□□ -0.06
CSTF3-203ENST00000438862 KIAA0100Q14667 2235 aaKnown RBP14.7□□□□□ -0.06
CSTF3-203ENST00000438862 PDAP1Q13442 181 aaKnown RBP14.69□□□□□ -0.06
CSTF3-203ENST00000438862 PDIA6Q15084 440 aa14.69□□□□□ -0.06
CSTF3-203ENST00000438862 SF3B3Q15393 1217 aaKnown RBP14.69□□□□□ -0.06
CSTF3-203ENST00000438862 SLC17A8Q8NDX2 589 aa14.69□□□□□ -0.06
CSTF3-203ENST00000438862 CELF1Q92879 486 aaKnown RBP14.69□□□□□ -0.06
CSTF3-203ENST00000438862 ARMC5Q96C12 935 aa14.69□□□□□ -0.06
CSTF3-203ENST00000438862 THUMPD2Q9BTF0 503 aaKnown RBP14.69□□□□□ -0.06
CSTF3-203ENST00000438862 SCN9AQ15858 1988 aa14.69□□□□□ -0.06
CSTF3-203ENST00000438862 ARMC9Q7Z3E5 817 aa14.68□□□□□ -0.06
CSTF3-203ENST00000438862 ERO1AQ96HE7 468 aa14.68□□□□□ -0.06
CSTF3-203ENST00000438862 GMLQ99445 158 aa14.68□□□□□ -0.06
CSTF3-203ENST00000438862 PODXL2Q9NZ53 605 aa14.68□□□□□ -0.06
CSTF3-203ENST00000438862 MANSC4A6NHS7 340 aaPredicted RBP14.67□□□□□ -0.06
CSTF3-203ENST00000438862 NEFMP07197 916 aa14.67□□□□□ -0.06
CSTF3-203ENST00000438862 RPS8P62241 208 aaKnown RBP14.67□□□□□ -0.06
CSTF3-203ENST00000438862 SPRYD7Q5W111 196 aa14.67□□□□□ -0.06
CSTF3-203ENST00000438862 EIF2S2P20042 333 aaKnown RBP14.66□□□□□ -0.06
CSTF3-203ENST00000438862 PTPN12Q05209 780 aaKnown RBP14.66□□□□□ -0.06
CSTF3-203ENST00000438862 CNGB1Q14028 1251 aaPredicted RBP14.66□□□□□ -0.06
CSTF3-203ENST00000438862 PRAMEF18Q5VWM3 479 aa14.66□□□□□ -0.06
CSTF3-203ENST00000438862 COPS6Q7L5N1 327 aa14.66□□□□□ -0.06
CSTF3-203ENST00000438862 CIZ1Q9ULV3 898 aaPredicted RBP14.66□□□□□ -0.06
CSTF3-203ENST00000438862 HTTP42858 3142 aa14.66□□□□□ -0.06
CSTF3-203ENST00000438862 CENPFP49454 3210 aa14.65□□□□□ -0.06
CSTF3-203ENST00000438862 LDLRAD1Q5T700 205 aa14.65□□□□□ -0.06
CSTF3-203ENST00000438862 EFCC1Q9HA90 598 aa14.65□□□□□ -0.06
CSTF3-203ENST00000438862 PSME4Q14997 1843 aa14.64□□□□□ -0.07
CSTF3-203ENST00000438862 SZT2Q5T011 3432 aa14.64□□□□□ -0.07
CSTF3-203ENST00000438862 USP17L3A6NCW0 530 aa14.64□□□□□ -0.07
CSTF3-203ENST00000438862 USP17L4A6NCW7 530 aa14.64□□□□□ -0.07
CSTF3-203ENST00000438862 AIMP1Q12904 312 aaKnown RBP14.64□□□□□ -0.07
CSTF3-203ENST00000438862 NBPF9Q3BBW0 867 aa14.64□□□□□ -0.07
CSTF3-203ENST00000438862 USP17L1Q7RTZ2 530 aa14.64□□□□□ -0.07
CSTF3-203ENST00000438862 PODNQ7Z5L7 613 aa14.64□□□□□ -0.07
CSTF3-203ENST00000438862 NBPF11Q86T75 865 aa14.64□□□□□ -0.07
CSTF3-203ENST00000438862 ANKIB1Q9P2G1 1089 aa14.64□□□□□ -0.07
CSTF3-203ENST00000438862 GGA1Q9UJY5 639 aa14.64□□□□□ -0.07
CSTF3-203ENST00000438862 SCAF8Q9UPN6 1271 aaKnown RBP14.64□□□□□ -0.07
CSTF3-203ENST00000438862 DLG5Q8TDM6 1919 aa14.64□□□□□ -0.07
CSTF3-203ENST00000438862 H0YGN5 161 aa14.63□□□□□ -0.07
CSTF3-203ENST00000438862 UFL1O94874 794 aa14.63□□□□□ -0.07
CSTF3-203ENST00000438862 ZBTB48P10074 688 aaPredicted RBP14.63□□□□□ -0.07
CSTF3-203ENST00000438862 MMP14P50281 582 aa14.63□□□□□ -0.07
CSTF3-203ENST00000438862 PROSER3Q2NL68 480 aa14.63□□□□□ -0.07
CSTF3-203ENST00000438862 OTUD7BQ6GQQ9 843 aa14.63□□□□□ -0.07
CSTF3-203ENST00000438862 OGFOD1Q8N543 542 aa14.63□□□□□ -0.07
CSTF3-203ENST00000438862 XAGE3Q8WTP9 111 aa14.63□□□□□ -0.07
CSTF3-203ENST00000438862 SLC10A4Q96EP9 437 aa14.63□□□□□ -0.07
CSTF3-203ENST00000438862 TRIOBPQ9H2D6 2365 aa14.62□□□□□ -0.07
CSTF3-203ENST00000438862 ANXA1P04083 346 aa14.62□□□□□ -0.07
CSTF3-203ENST00000438862 ARHGEF6Q15052 776 aa14.62□□□□□ -0.07
CSTF3-203ENST00000438862 CD99L2Q8TCZ2 262 aa14.62□□□□□ -0.07
CSTF3-203ENST00000438862 FAM89AQ96GI7 184 aa14.62□□□□□ -0.07
CSTF3-203ENST00000438862 ZNF333Q96JL9 665 aa14.62□□□□□ -0.07
CSTF3-203ENST00000438862 BRCA2P51587 3418 aa14.61□□□□□ -0.07
CSTF3-203ENST00000438862 UNCXA6NJT0 531 aa14.61□□□□□ -0.07
CSTF3-203ENST00000438862 WNT10BO00744 389 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms